RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235	PRKRIP1	Q9H875	184 aa	Predicted RBP	5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	TUBA8	Q9NY65	449 aa	Predicted RBP	5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	PLK2	Q9NYY3	685 aa		5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	TBC1D29	Q9UFV1	150 aa		5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	NDRG3	Q9UGV2	375 aa		5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	BTBD3	Q9Y2F9	522 aa		5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	ADAM18	Q9Y3Q7	739 aa		5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	LSM4	Q9Y4Z0	139 aa	Known RBP	5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	MED1	Q15648	1581 aa	Predicted RBP	5.64	□□□□□ -1.51
TCF12-223	ENST00000561235		A0A1W2PQF6	199 aa		5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	WDR91	A4D1P6	747 aa		5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	TTC36	A6NLP5	189 aa		5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	USP17L23	D6RBM5	183 aa		5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	TAF4	O00268	1085 aa		5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	BCAT2	O15382	392 aa	Predicted RBP	5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	PAGE4	O60829	102 aa		5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	ZC3H11A	O75152	810 aa	Known RBP eCLIP	5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	PPFIA2	O75334	1257 aa		5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	EPN2	O95208	641 aa		5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	MT-CYB	P00156	380 aa	Predicted RBP	5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	EIF2S1	P05198	315 aa	Known RBP	5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	MMP3	P08254	477 aa		5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	MYZAP	P0CAP1	466 aa		5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	PCNA	P12004	261 aa		5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	DCTD	P32321	178 aa		5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	HOXD13	P35453	343 aa		5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	PPARG	P37231	505 aa	Predicted RBP	5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	PIP4K2A	P48426	406 aa	Predicted RBP	5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	PRKG2	Q13237	762 aa		5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	PDE1C	Q14123	709 aa	Predicted RBP	5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	DPCR1	Q3MIW9	517 aa		5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	ESCO2	Q56NI9	601 aa		5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	HIST2H2BC	Q6DN03	193 aa		5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	HIST2H2BD	Q6DRA6	164 aa		5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	ZCCHC9	Q8N567	271 aa	Known RBP	5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	WDTC1	Q8N5D0	677 aa		5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	PARP16	Q8N5Y8	322 aa		5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	GPT2	Q8TD30	523 aa		5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	TASP1	Q9H6P5	420 aa		5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	KIF9	Q9HAQ2	790 aa		5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	FBRSL1	Q9HCM7	1045 aa	Known RBP	5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	DECR2	Q9NUI1	292 aa		5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	EHD2	Q9NZN4	543 aa		5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	HAO1	Q9UJM8	370 aa		5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	HS3ST3B1	Q9Y662	390 aa		5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	A3GALT2	U3KPV4	340 aa		5.64	□□□□□ -1.51
TCF12-223	ENST00000561235	MAP3K4	Q9Y6R4	1608 aa		5.63	□□□□□ -1.51
TCF12-223	ENST00000561235		A0A0U1RQF3	1178 aa		5.63	□□□□□ -1.51
TCF12-223	ENST00000561235	PTGES3L	E9PB15	166 aa		5.63	□□□□□ -1.51
TCF12-223	ENST00000561235	GTPBP1	O00178	669 aa	Known RBP	5.63	□□□□□ -1.51
TCF12-223	ENST00000561235	SEC14L5	O43304	696 aa		5.63	□□□□□ -1.51
TCF12-223	ENST00000561235	KLK8	O60259	260 aa		5.63	□□□□□ -1.51
TCF12-223	ENST00000561235	HNRNPCL1	O60812	293 aa	Known RBP	5.63	□□□□□ -1.51
TCF12-223	ENST00000561235	RGS11	O94810	467 aa		5.63	□□□□□ -1.51
TCF12-223	ENST00000561235	FGB	P02675	491 aa		5.63	□□□□□ -1.51
TCF12-223	ENST00000561235	IL7R	P16871	459 aa		5.63	□□□□□ -1.51
TCF12-223	ENST00000561235	GABRB2	P47870	512 aa		5.63	□□□□□ -1.51
TCF12-223	ENST00000561235	CLNS1A	P54105	237 aa	Known RBP	5.63	□□□□□ -1.51
TCF12-223	ENST00000561235	C21orf58	P58505	322 aa		5.63	□□□□□ -1.51
TCF12-223	ENST00000561235	SELENOV	P59797	346 aa		5.63	□□□□□ -1.51
TCF12-223	ENST00000561235	GOLGA8DP	Q0D2H9	430 aa		5.63	□□□□□ -1.51
TCF12-223	ENST00000561235	ARHGEF6	Q15052	776 aa		5.63	□□□□□ -1.51
TCF12-223	ENST00000561235	TOMM20	Q15388	145 aa		5.63	□□□□□ -1.51
TCF12-223	ENST00000561235	SOWAHA	Q2M3V2	549 aa		5.63	□□□□□ -1.51
TCF12-223	ENST00000561235		Q5PR19	223 aa		5.63	□□□□□ -1.51
TCF12-223	ENST00000561235	NCEH1	Q6PIU2	408 aa		5.63	□□□□□ -1.51
TCF12-223	ENST00000561235	FBXO46	Q6PJ61	603 aa	Predicted RBP	5.63	□□□□□ -1.51
TCF12-223	ENST00000561235	LCTL	Q6UWM7	567 aa		5.63	□□□□□ -1.51
TCF12-223	ENST00000561235	CTU1	Q7Z7A3	348 aa	Known RBP	5.63	□□□□□ -1.51
TCF12-223	ENST00000561235	RBFA	Q8N0V3	343 aa		5.63	□□□□□ -1.51
TCF12-223	ENST00000561235	ARFGAP1	Q8N6T3	406 aa		5.63	□□□□□ -1.51
TCF12-223	ENST00000561235	PIGO	Q8TEQ8	1089 aa		5.63	□□□□□ -1.51
TCF12-223	ENST00000561235	FAM149B1	Q96BN6	582 aa		5.63	□□□□□ -1.51
TCF12-223	ENST00000561235	MMAB	Q96EY8	250 aa	Predicted RBP	5.63	□□□□□ -1.51
TCF12-223	ENST00000561235	MSTO1	Q9BUK6	570 aa		5.63	□□□□□ -1.51
TCF12-223	ENST00000561235	STRA6	Q9BX79	667 aa		5.63	□□□□□ -1.51
TCF12-223	ENST00000561235	HCFC1R1	Q9NWW0	138 aa		5.63	□□□□□ -1.51
TCF12-223	ENST00000561235	VPS28	Q9UK41	221 aa		5.63	□□□□□ -1.51
TCF12-223	ENST00000561235	SLC45A1	Q9Y2W3	748 aa		5.63	□□□□□ -1.51
TCF12-223	ENST00000561235	LYVE1	Q9Y5Y7	322 aa		5.63	□□□□□ -1.51
TCF12-223	ENST00000561235	ZNF804B	A4D1E1	1349 aa		5.63	□□□□□ -1.51
TCF12-223	ENST00000561235	TEX14	Q8IWB6	1497 aa		5.63	□□□□□ -1.51
TCF12-223	ENST00000561235	KLKB1	P03952	638 aa		5.62	□□□□□ -1.51
TCF12-223	ENST00000561235	FGF2	P09038	288 aa		5.62	□□□□□ -1.51
TCF12-223	ENST00000561235	CBSL	P0DN79	551 aa		5.62	□□□□□ -1.51
TCF12-223	ENST00000561235	KRT10	P13645	584 aa		5.62	□□□□□ -1.51
TCF12-223	ENST00000561235	ETFA	P13804	333 aa		5.62	□□□□□ -1.51
TCF12-223	ENST00000561235	TM4SF1	P30408	202 aa		5.62	□□□□□ -1.51
TCF12-223	ENST00000561235	CDA	P32320	146 aa		5.62	□□□□□ -1.51
TCF12-223	ENST00000561235	SHMT1	P34896	483 aa		5.62	□□□□□ -1.51
TCF12-223	ENST00000561235	CBS	P35520	551 aa		5.62	□□□□□ -1.51
TCF12-223	ENST00000561235	ME1	P48163	572 aa		5.62	□□□□□ -1.51
TCF12-223	ENST00000561235	ALDH7A1	P49419	539 aa	Known RBP	5.62	□□□□□ -1.51
TCF12-223	ENST00000561235	FAM27E3	Q08E93	113 aa		5.62	□□□□□ -1.51
TCF12-223	ENST00000561235	ETFDH	Q16134	617 aa		5.62	□□□□□ -1.51
TCF12-223	ENST00000561235	DUSP6	Q16828	381 aa		5.62	□□□□□ -1.51
TCF12-223	ENST00000561235	WASHC2D	Q5SRD0	308 aa		5.62	□□□□□ -1.51
TCF12-223	ENST00000561235	MANEA	Q5SRI9	462 aa		5.62	□□□□□ -1.51
TCF12-223	ENST00000561235	NCAPH2	Q6IBW4	605 aa		5.62	□□□□□ -1.51
TCF12-223	ENST00000561235	MMP21	Q8N119	569 aa		5.62	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms