RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 CLPBQ9H078 707 aa16.35■□□□□ 0.21
SNX1-213ENST00000561026 PRORYQ9H606 182 aa16.35■□□□□ 0.21
SNX1-213ENST00000561026 ATP13A3Q9H7F0 1226 aa16.35■□□□□ 0.21
SNX1-213ENST00000561026 CNOT8Q9UFF9 292 aaKnown RBP16.35■□□□□ 0.21
SNX1-213ENST00000561026 ATP8A1Q9Y2Q0 1164 aa16.35■□□□□ 0.21
SNX1-213ENST00000561026 RAI2Q9Y5P3 530 aa16.35■□□□□ 0.21
SNX1-213ENST00000561026 A0A1B0GTH6 734 aa16.34■□□□□ 0.21
SNX1-213ENST00000561026 MUSKO15146 869 aa16.34■□□□□ 0.21
SNX1-213ENST00000561026 LRCH4O75427 683 aa16.34■□□□□ 0.21
SNX1-213ENST00000561026 DXOO77932 396 aaKnown RBP16.34■□□□□ 0.21
SNX1-213ENST00000561026 MMP12P39900 470 aa16.34■□□□□ 0.21
SNX1-213ENST00000561026 ZNF165P49910 485 aa16.34■□□□□ 0.21
SNX1-213ENST00000561026 LIG3P49916 1009 aa16.34■□□□□ 0.21
SNX1-213ENST00000561026 BLKP51451 505 aa16.34■□□□□ 0.21
SNX1-213ENST00000561026 ZNF135P52742 658 aaPredicted RBP16.34■□□□□ 0.21
SNX1-213ENST00000561026 HK3P52790 923 aa16.34■□□□□ 0.21
SNX1-213ENST00000561026 GABREP78334 506 aa16.34■□□□□ 0.21
SNX1-213ENST00000561026 KLHL30Q0D2K2 578 aa16.34■□□□□ 0.21
SNX1-213ENST00000561026 INPP5AQ14642 412 aa16.34■□□□□ 0.21
SNX1-213ENST00000561026 ACAP1Q15027 740 aa16.34■□□□□ 0.21
SNX1-213ENST00000561026 AGERQ15109 404 aa16.34■□□□□ 0.21
SNX1-213ENST00000561026 SLC35F3Q8IY50 421 aa16.34■□□□□ 0.21
SNX1-213ENST00000561026 NPWQ8N729 165 aa16.34■□□□□ 0.21
SNX1-213ENST00000561026 GLMNQ92990 594 aa16.34■□□□□ 0.21
SNX1-213ENST00000561026 ZNF578Q96N58 590 aaPredicted RBP16.34■□□□□ 0.21
SNX1-213ENST00000561026 EDEM3Q9BZQ6 932 aa16.34■□□□□ 0.21
SNX1-213ENST00000561026 POLR1BQ9H9Y6 1135 aa16.34■□□□□ 0.21
SNX1-213ENST00000561026 CWC15Q9P013 229 aaKnown RBP16.34■□□□□ 0.21
SNX1-213ENST00000561026 CFAP69A5D8W1 941 aa16.33■□□□□ 0.2
SNX1-213ENST00000561026 DFFAO00273 331 aa16.33■□□□□ 0.2
SNX1-213ENST00000561026 PRKCGP05129 697 aa16.33■□□□□ 0.2
SNX1-213ENST00000561026 HTR1BP28222 390 aa16.33■□□□□ 0.2
SNX1-213ENST00000561026 SERPINA4P29622 427 aa16.33■□□□□ 0.2
SNX1-213ENST00000561026 IL10RBQ08334 325 aa16.33■□□□□ 0.2
SNX1-213ENST00000561026 CCDC173Q0VFZ6 552 aa16.33■□□□□ 0.2
SNX1-213ENST00000561026 DPYSQ14117 519 aa16.33■□□□□ 0.2
SNX1-213ENST00000561026 RFTN1Q14699 578 aaPredicted RBP16.33■□□□□ 0.2
SNX1-213ENST00000561026 NFATC4Q14934 902 aa16.33■□□□□ 0.2
SNX1-213ENST00000561026 ELOCQ15369 112 aa16.33■□□□□ 0.2
SNX1-213ENST00000561026 PERM1Q5SV97 790 aa16.33■□□□□ 0.2
SNX1-213ENST00000561026 ARHGAP36Q6ZRI8 547 aa16.33■□□□□ 0.2
SNX1-213ENST00000561026 FSTL5Q8N475 847 aaPredicted RBP16.33■□□□□ 0.2
SNX1-213ENST00000561026 NAT6Q93015 286 aa16.33■□□□□ 0.2
SNX1-213ENST00000561026 TSACCQ96A04 125 aaPredicted RBP16.33■□□□□ 0.2
SNX1-213ENST00000561026 ZNF653Q96CK0 615 aa16.33■□□□□ 0.2
SNX1-213ENST00000561026 GRAMD1AQ96CP6 724 aa16.33■□□□□ 0.2
SNX1-213ENST00000561026 ECHDC3Q96DC8 303 aa16.33■□□□□ 0.2
SNX1-213ENST00000561026 HIC2Q96JB3 615 aa16.33■□□□□ 0.2
SNX1-213ENST00000561026 APOOQ9BUR5 198 aa16.33■□□□□ 0.2
SNX1-213ENST00000561026 CINPQ9BW66 212 aaPredicted RBP16.33■□□□□ 0.2
SNX1-213ENST00000561026 SP110Q9HB58 689 aa16.33■□□□□ 0.2
SNX1-213ENST00000561026 MRPL47Q9HD33 250 aaKnown RBP16.33■□□□□ 0.2
SNX1-213ENST00000561026 OR1A2Q9Y585 309 aa16.33■□□□□ 0.2
SNX1-213ENST00000561026 SCINQ9Y6U3 715 aa16.33■□□□□ 0.2
SNX1-213ENST00000561026 TCEA3O75764 348 aa16.32■□□□□ 0.2
SNX1-213ENST00000561026 RASGRP1O95267 797 aa16.32■□□□□ 0.2
SNX1-213ENST00000561026 CELA2BP08218 269 aaPredicted RBP16.32■□□□□ 0.2
SNX1-213ENST00000561026 MYBL1P10243 752 aa16.32■□□□□ 0.2
SNX1-213ENST00000561026 SKILP12757 684 aa16.32■□□□□ 0.2
SNX1-213ENST00000561026 PCK1P35558 622 aa16.32■□□□□ 0.2
SNX1-213ENST00000561026 ERVPABLB-1P60509 514 aa16.32■□□□□ 0.2
SNX1-213ENST00000561026 TLE3Q04726 772 aa16.32■□□□□ 0.2
SNX1-213ENST00000561026 BCL2L1Q07817 233 aa16.32■□□□□ 0.2
SNX1-213ENST00000561026 NR1I3Q14994 352 aa16.32■□□□□ 0.2
SNX1-213ENST00000561026 ALG11Q2TAA5 492 aa16.32■□□□□ 0.2
SNX1-213ENST00000561026 ESRP1Q6NXG1 681 aaKnown RBP16.32■□□□□ 0.2
SNX1-213ENST00000561026 LVRNQ6Q4G3 990 aa16.32■□□□□ 0.2
SNX1-213ENST00000561026 CRTC1Q6UUV9 634 aa16.32■□□□□ 0.2
SNX1-213ENST00000561026 ENPP7Q6UWV6 458 aa16.32■□□□□ 0.2
SNX1-213ENST00000561026 RBM44Q6ZP01 1051 aaKnown RBP16.32■□□□□ 0.2
SNX1-213ENST00000561026 HID1Q8IV36 788 aa16.32■□□□□ 0.2
SNX1-213ENST00000561026 SPACA3Q8IXA5 215 aa16.32■□□□□ 0.2
SNX1-213ENST00000561026 LZTR1Q8N653 840 aa16.32■□□□□ 0.2
SNX1-213ENST00000561026 ZNF248Q8NDW4 579 aa16.32■□□□□ 0.2
SNX1-213ENST00000561026 SCG3Q8WXD2 468 aaKnown RBP16.32■□□□□ 0.2
SNX1-213ENST00000561026 TRIM11Q96F44 468 aa16.32■□□□□ 0.2
SNX1-213ENST00000561026 UBL7Q96S82 380 aaPredicted RBP16.32■□□□□ 0.2
SNX1-213ENST00000561026 ISCUQ9H1K1 167 aa16.32■□□□□ 0.2
SNX1-213ENST00000561026 ZWILCHQ9H900 591 aa16.32■□□□□ 0.2
SNX1-213ENST00000561026 PADI4Q9UM07 663 aa16.32■□□□□ 0.2
SNX1-213ENST00000561026 DOLKQ9UPQ8 538 aa16.32■□□□□ 0.2
SNX1-213ENST00000561026 RP1P56715 2156 aa16.31■□□□□ 0.2
SNX1-213ENST00000561026 TRAFD1O14545 582 aaPredicted RBP16.31■□□□□ 0.2
SNX1-213ENST00000561026 ALPIP09923 528 aa16.31■□□□□ 0.2
SNX1-213ENST00000561026 CTSEP14091 401 aa16.31■□□□□ 0.2
SNX1-213ENST00000561026 SCNN1BP51168 640 aa16.31■□□□□ 0.2
SNX1-213ENST00000561026 PCBP4P57723 403 aaKnown RBP16.31■□□□□ 0.2
SNX1-213ENST00000561026 SRP54P61011 504 aaKnown RBP16.31■□□□□ 0.2
SNX1-213ENST00000561026 POLR2LP62875 67 aaKnown RBP16.31■□□□□ 0.2
SNX1-213ENST00000561026 RALGDSQ12967 914 aa16.31■□□□□ 0.2
SNX1-213ENST00000561026 MTM1Q13496 603 aa16.31■□□□□ 0.2
SNX1-213ENST00000561026 IQCB1Q15051 598 aa16.31■□□□□ 0.2
SNX1-213ENST00000561026 FIGNQ5HY92 759 aa16.31■□□□□ 0.2
SNX1-213ENST00000561026 CAVIN1Q6NZI2 390 aaKnown RBP16.31■□□□□ 0.2
SNX1-213ENST00000561026 RD3Q7Z3Z2 195 aa16.31■□□□□ 0.2
SNX1-213ENST00000561026 TP53INP2Q8IXH6 220 aa16.31■□□□□ 0.2
SNX1-213ENST00000561026 SDR16C5Q8N3Y7 309 aa16.31■□□□□ 0.2
SNX1-213ENST00000561026 ATL2Q8NHH9 583 aa16.31■□□□□ 0.2
SNX1-213ENST00000561026 WDR48Q8TAF3 677 aa16.31■□□□□ 0.2
SNX1-213ENST00000561026 ATXN7L3BQ96GX2 97 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms