RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 RGL1Q9NZL6 768 aa3.99□□□□□ -1.77
HERC1-211ENST00000560983 ARHGAP26Q9UNA1 814 aa3.99□□□□□ -1.77
HERC1-211ENST00000560983 EPN1Q9Y6I3 576 aaPredicted RBP3.99□□□□□ -1.77
HERC1-211ENST00000560983 SPTBN1Q01082 2364 aaKnown RBP3.99□□□□□ -1.77
HERC1-211ENST00000560983 NBASA2RRP1 2371 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 TRAV19A0A0A6YYK7 116 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 B5MCH6 92 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 E7EWF7 191 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 ACKR2O00590 384 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 TRIM38O00635 465 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 TSPAN3O60637 253 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 DIAPH2O60879 1101 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 TULP3O75386 442 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 CSO75390 466 aaKnown RBP3.98□□□□□ -1.77
HERC1-211ENST00000560983 SLITRK3O94933 977 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 HDCP19113 662 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 XPAP23025 273 aaPredicted RBP3.98□□□□□ -1.77
HERC1-211ENST00000560983 OXTRP30559 389 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 HSPA4P34932 840 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 UQCRFS1P47985 274 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 DUSP3P51452 185 aaPredicted RBP3.98□□□□□ -1.77
HERC1-211ENST00000560983 NEK4P51957 841 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 APBA1Q02410 837 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 NHLH2Q02577 135 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 TRDNQ13061 729 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 RESTQ13127 1097 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 PRPF4BQ13523 1007 aaKnown RBP3.98□□□□□ -1.77
HERC1-211ENST00000560983 MORC3Q14149 939 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 VEPH1Q14D04 833 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 TGIF1Q15583 401 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 TAF12Q16514 161 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 BMT2Q1RMZ1 405 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 FUT11Q495W5 492 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 XKR9Q5GH70 373 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 FAM102AQ5T9C2 384 aaPredicted RBP3.98□□□□□ -1.77
HERC1-211ENST00000560983 ANKS6Q68DC2 871 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 CAPRIN2Q6IMN6 1127 aaKnown RBP3.98□□□□□ -1.77
HERC1-211ENST00000560983 KIAA1324Q6UXG2 1013 aaKnown RBP3.98□□□□□ -1.77
HERC1-211ENST00000560983 FRMD7Q6ZUT3 714 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 RSRC2Q7L4I2 434 aaKnown RBP3.98□□□□□ -1.77
HERC1-211ENST00000560983 OTUD6AQ7L8S5 288 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 ADGRG3Q86Y34 549 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 CHPFQ8IZ52 775 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 SNX33Q8WV41 574 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 NUP58Q9BVL2 599 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 TARS2Q9BW92 718 aaKnown RBP3.98□□□□□ -1.77
HERC1-211ENST00000560983 TEX101Q9BY14 249 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 ZMYND12Q9H0C1 365 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 ZCWPW1Q9H0M4 648 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 TMEM206Q9H813 350 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 TRPC7Q9HCX4 862 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 PTPRHQ9HD43 1115 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 SLC38A7Q9NVC3 462 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 DONSONQ9NYP3 566 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 TRPM5Q9NZQ8 1165 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 ANAPC2Q9UJX6 822 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 SATB2Q9UPW6 733 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.98□□□□□ -1.77
HERC1-211ENST00000560983 COX11Q9Y6N1 276 aa3.98□□□□□ -1.77
HERC1-211ENST00000560983 NIPBLQ6KC79 2804 aaeCLIP3.98□□□□□ -1.77
HERC1-211ENST00000560983 STK36Q9NRP7 1315 aa3.97□□□□□ -1.77
HERC1-211ENST00000560983 MYH6P13533 1939 aa3.97□□□□□ -1.77
HERC1-211ENST00000560983 A0A087WWV3 80 aa3.97□□□□□ -1.77
HERC1-211ENST00000560983 A0A087X0B3 334 aa3.97□□□□□ -1.77
HERC1-211ENST00000560983 PIPSLA2A3N6 862 aa3.97□□□□□ -1.77
HERC1-211ENST00000560983 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.97□□□□□ -1.77
HERC1-211ENST00000560983 PRRT4C9JH25 899 aa3.97□□□□□ -1.77
HERC1-211ENST00000560983 LAD1O00515 517 aa3.97□□□□□ -1.77
HERC1-211ENST00000560983 SH2B2O14492 632 aaPredicted RBP3.97□□□□□ -1.77
HERC1-211ENST00000560983 VILLO15195 856 aa3.97□□□□□ -1.77
HERC1-211ENST00000560983 ZNF185O15231 689 aa3.97□□□□□ -1.77
HERC1-211ENST00000560983 NOL4O94818 638 aa3.97□□□□□ -1.77
HERC1-211ENST00000560983 GASTP01350 101 aa3.97□□□□□ -1.77
HERC1-211ENST00000560983 WNT1P04628 370 aa3.97□□□□□ -1.77
HERC1-211ENST00000560983 PRKCGP05129 697 aa3.97□□□□□ -1.77
HERC1-211ENST00000560983 TYMPP19971 482 aa3.97□□□□□ -1.77
HERC1-211ENST00000560983 GNLYP22749 145 aa3.97□□□□□ -1.77
HERC1-211ENST00000560983 CD27P26842 260 aa3.97□□□□□ -1.77
HERC1-211ENST00000560983 RBMS1P29558 406 aaKnown RBP3.97□□□□□ -1.77
HERC1-211ENST00000560983 ACSL1P33121 698 aa3.97□□□□□ -1.77
HERC1-211ENST00000560983 SEC24CP53992 1094 aa3.97□□□□□ -1.77
HERC1-211ENST00000560983 C21orf58P58505 322 aa3.97□□□□□ -1.77
HERC1-211ENST00000560983 RPL10AP62906 217 aaKnown RBP3.97□□□□□ -1.77
HERC1-211ENST00000560983 PPP2R5CQ13362 524 aa3.97□□□□□ -1.77
HERC1-211ENST00000560983 ZBTB6Q15916 424 aa3.97□□□□□ -1.77
HERC1-211ENST00000560983 ISXQ2M1V0 245 aa3.97□□□□□ -1.77
HERC1-211ENST00000560983 DCAF4L1Q3SXM0 396 aa3.97□□□□□ -1.77
HERC1-211ENST00000560983 SLC39A12Q504Y0 691 aa3.97□□□□□ -1.77
HERC1-211ENST00000560983 PDCD4Q53EL6 469 aaKnown RBP3.97□□□□□ -1.77
HERC1-211ENST00000560983 PITRM1Q5JRX3 1037 aa3.97□□□□□ -1.77
HERC1-211ENST00000560983 C10orf76Q5T2E6 689 aa3.97□□□□□ -1.77
HERC1-211ENST00000560983 SDHAF4Q5VUM1 108 aa3.97□□□□□ -1.77
HERC1-211ENST00000560983 SDE2Q6IQ49 451 aa3.97□□□□□ -1.77
HERC1-211ENST00000560983 ARMCX5Q6P1M9 558 aa3.97□□□□□ -1.77
HERC1-211ENST00000560983 USP37Q86T82 979 aa3.97□□□□□ -1.77
HERC1-211ENST00000560983 TMTC2Q8N394 836 aa3.97□□□□□ -1.77
HERC1-211ENST00000560983 TERB1Q8NA31 727 aa3.97□□□□□ -1.77
HERC1-211ENST00000560983 FAM98AQ8NCA5 519 aaKnown RBP3.97□□□□□ -1.77
HERC1-211ENST00000560983 OR10H5Q8NGA6 315 aa3.97□□□□□ -1.77
HERC1-211ENST00000560983 OR14C36Q8NHC7 312 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms