RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 C14orf28Q4W4Y0 310 aa18.7■□□□□ 0.58
TPM1-226ENST00000560959 LRRC73Q5JTD7 316 aa18.7■□□□□ 0.58
TPM1-226ENST00000560959 ATXN7L2Q5T6C5 722 aaPredicted RBP18.7■□□□□ 0.58
TPM1-226ENST00000560959 PIM3Q86V86 326 aa18.7■□□□□ 0.58
TPM1-226ENST00000560959 IRF2BP1Q8IU81 584 aa18.7■□□□□ 0.58
TPM1-226ENST00000560959 GPBAR1Q8TDU6 330 aa18.7■□□□□ 0.58
TPM1-226ENST00000560959 CFAP57Q96MR6 1250 aa18.7■□□□□ 0.58
TPM1-226ENST00000560959 CDH19Q9H159 772 aa18.7■□□□□ 0.58
TPM1-226ENST00000560959 PLCB1Q9NQ66 1216 aa18.7■□□□□ 0.58
TPM1-226ENST00000560959 DNAI1Q9UI46 699 aa18.7■□□□□ 0.58
TPM1-226ENST00000560959 PCDHGA3Q9Y5H0 932 aa18.7■□□□□ 0.58
TPM1-226ENST00000560959 UNC13CQ8NB66 2214 aa18.69■□□□□ 0.58
TPM1-226ENST00000560959 CFAP69A5D8W1 941 aa18.69■□□□□ 0.58
TPM1-226ENST00000560959 TNFRSF10CO14798 259 aa18.69■□□□□ 0.58
TPM1-226ENST00000560959 HGSO14964 777 aaPredicted RBP18.69■□□□□ 0.58
TPM1-226ENST00000560959 IGSF6O95976 241 aa18.69■□□□□ 0.58
TPM1-226ENST00000560959 HOXC4P09017 264 aaPredicted RBP18.69■□□□□ 0.58
TPM1-226ENST00000560959 ITIH2P19823 946 aa18.69■□□□□ 0.58
TPM1-226ENST00000560959 XPAP23025 273 aaPredicted RBP18.69■□□□□ 0.58
TPM1-226ENST00000560959 ATP1A2P50993 1020 aa18.69■□□□□ 0.58
TPM1-226ENST00000560959 FOXK1P85037 733 aa18.69■□□□□ 0.58
TPM1-226ENST00000560959 B4GALNT1Q00973 533 aa18.69■□□□□ 0.58
TPM1-226ENST00000560959 APBA1Q02410 837 aa18.69■□□□□ 0.58
TPM1-226ENST00000560959 GRM3Q14832 879 aa18.69■□□□□ 0.58
TPM1-226ENST00000560959 TRNP1Q6NT89 227 aa18.69■□□□□ 0.58
TPM1-226ENST00000560959 FAM46DQ8NEK8 389 aa18.69■□□□□ 0.58
TPM1-226ENST00000560959 PDCL3Q9H2J4 239 aa18.69■□□□□ 0.58
TPM1-226ENST00000560959 ANAPC2Q9UJX6 822 aa18.69■□□□□ 0.58
TPM1-226ENST00000560959 DNAJC12Q9UKB3 198 aa18.69■□□□□ 0.58
TPM1-226ENST00000560959 OR1A2Q9Y585 309 aa18.69■□□□□ 0.58
TPM1-226ENST00000560959 TSPAN11A1L157 253 aa18.68■□□□□ 0.58
TPM1-226ENST00000560959 ZW10O43264 779 aa18.68■□□□□ 0.58
TPM1-226ENST00000560959 BUB1O43683 1085 aa18.68■□□□□ 0.58
TPM1-226ENST00000560959 TMCC1O94876 653 aa18.68■□□□□ 0.58
TPM1-226ENST00000560959 CPNE6O95741 557 aa18.68■□□□□ 0.58
TPM1-226ENST00000560959 CR2P20023 1033 aa18.68■□□□□ 0.58
TPM1-226ENST00000560959 CASRP41180 1078 aa18.68■□□□□ 0.58
TPM1-226ENST00000560959 KIAA1024LP59773 190 aa18.68■□□□□ 0.58
TPM1-226ENST00000560959 KCNAB2Q13303 367 aa18.68■□□□□ 0.58
TPM1-226ENST00000560959 UGP2Q16851 508 aa18.68■□□□□ 0.58
TPM1-226ENST00000560959 PHF19Q5T6S3 580 aa18.68■□□□□ 0.58
TPM1-226ENST00000560959 RWDD4Q6NW29 188 aaKnown RBP18.68■□□□□ 0.58
TPM1-226ENST00000560959 TMPRSS9Q7Z410 1059 aa18.68■□□□□ 0.58
TPM1-226ENST00000560959 TAF8Q7Z7C8 310 aa18.68■□□□□ 0.58
TPM1-226ENST00000560959 MSANTD4Q8NCY6 345 aa18.68■□□□□ 0.58
TPM1-226ENST00000560959 NKD1Q969G9 470 aa18.68■□□□□ 0.58
TPM1-226ENST00000560959 HMCESQ96FZ2 354 aa18.68■□□□□ 0.58
TPM1-226ENST00000560959 CATSPER2Q96P56 530 aa18.68■□□□□ 0.58
TPM1-226ENST00000560959 TAAR9Q96RI9 348 aa18.68■□□□□ 0.58
TPM1-226ENST00000560959 SEMA6CQ9H3T2 930 aa18.68■□□□□ 0.58
TPM1-226ENST00000560959 LSM8O95777 96 aaKnown RBP18.67■□□□□ 0.58
TPM1-226ENST00000560959 KELP23276 732 aa18.67■□□□□ 0.58
TPM1-226ENST00000560959 NR1D2Q14995 579 aa18.67■□□□□ 0.58
TPM1-226ENST00000560959 C16orf72Q14CZ0 275 aa18.67■□□□□ 0.58
TPM1-226ENST00000560959 EFHC2Q5JST6 749 aa18.67■□□□□ 0.58
TPM1-226ENST00000560959 OR56A4Q8NGH8 313 aa18.67■□□□□ 0.58
TPM1-226ENST00000560959 TBC1D31Q96DN5 1066 aa18.67■□□□□ 0.58
TPM1-226ENST00000560959 EPN3Q9H201 632 aa18.67■□□□□ 0.58
TPM1-226ENST00000560959 SIX2Q9NPC8 291 aa18.67■□□□□ 0.58
TPM1-226ENST00000560959 NEU3Q9UQ49 428 aa18.67■□□□□ 0.58
TPM1-226ENST00000560959 COQ6Q9Y2Z9 468 aa18.67■□□□□ 0.58
TPM1-226ENST00000560959 CHD5Q8TDI0 1954 aa18.67■□□□□ 0.58
TPM1-226ENST00000560959 CAPN5O15484 640 aaPredicted RBP18.66■□□□□ 0.58
TPM1-226ENST00000560959 LRIG2O94898 1065 aa18.66■□□□□ 0.58
TPM1-226ENST00000560959 CYP11B1P15538 503 aa18.66■□□□□ 0.58
TPM1-226ENST00000560959 TRIM23P36406 574 aa18.66■□□□□ 0.58
TPM1-226ENST00000560959 LIG3P49916 1009 aa18.66■□□□□ 0.58
TPM1-226ENST00000560959 POLE2P56282 527 aa18.66■□□□□ 0.58
TPM1-226ENST00000560959 RHOAP61586 193 aa18.66■□□□□ 0.58
TPM1-226ENST00000560959 TRA2AQ13595 282 aaKnown RBP eCLIP18.66■□□□□ 0.58
TPM1-226ENST00000560959 TCEA2Q15560 299 aa18.66■□□□□ 0.58
TPM1-226ENST00000560959 SPECC1LQ69YQ0 1117 aa18.66■□□□□ 0.58
TPM1-226ENST00000560959 ERAP2Q6P179 960 aa18.66■□□□□ 0.58
TPM1-226ENST00000560959 BRAT1Q6PJG6 821 aa18.66■□□□□ 0.58
TPM1-226ENST00000560959 LEKR1Q6ZMV7 388 aa18.66■□□□□ 0.58
TPM1-226ENST00000560959 C17orf82Q86X59 251 aaPredicted RBP18.66■□□□□ 0.58
TPM1-226ENST00000560959 PTRH1Q86Y79 214 aaKnown RBP18.66■□□□□ 0.58
TPM1-226ENST00000560959 KIAA1524Q8TCG1 905 aa18.66■□□□□ 0.58
TPM1-226ENST00000560959 OR1E3Q8WZA6 343 aa18.66■□□□□ 0.58
TPM1-226ENST00000560959 PDXPQ96GD0 296 aa18.66■□□□□ 0.58
TPM1-226ENST00000560959 ZNF641Q96N77 438 aaPredicted RBP18.66■□□□□ 0.58
TPM1-226ENST00000560959 DPEP2Q9H4A9 486 aa18.66■□□□□ 0.58
TPM1-226ENST00000560959 SUV39H2Q9H5I1 410 aa18.66■□□□□ 0.58
TPM1-226ENST00000560959 PCDH12Q9NPG4 1184 aa18.66■□□□□ 0.58
TPM1-226ENST00000560959 AJAP1Q9UKB5 411 aaPredicted RBP18.66■□□□□ 0.58
TPM1-226ENST00000560959 DAAM1Q9Y4D1 1078 aa18.66■□□□□ 0.58
TPM1-226ENST00000560959 LRRK2Q5S007 2527 aa18.65■□□□□ 0.58
TPM1-226ENST00000560959 FAM72CH0Y354 149 aa18.65■□□□□ 0.58
TPM1-226ENST00000560959 CACNB4O00305 520 aaPredicted RBP18.65■□□□□ 0.58
TPM1-226ENST00000560959 B4GAT1O43505 415 aa18.65■□□□□ 0.58
TPM1-226ENST00000560959 PLEKP08567 350 aaPredicted RBP18.65■□□□□ 0.58
TPM1-226ENST00000560959 CCL4P13236 92 aa18.65■□□□□ 0.58
TPM1-226ENST00000560959 STAT1P42224 750 aa18.65■□□□□ 0.58
TPM1-226ENST00000560959 CCR10P46092 362 aa18.65■□□□□ 0.58
TPM1-226ENST00000560959 YBEYP58557 167 aaPredicted RBP18.65■□□□□ 0.58
TPM1-226ENST00000560959 ATP11AP98196 1134 aa18.65■□□□□ 0.58
TPM1-226ENST00000560959 TSR1Q2NL82 804 aaKnown RBP18.65■□□□□ 0.58
TPM1-226ENST00000560959 MAP9Q49MG5 647 aa18.65■□□□□ 0.58
TPM1-226ENST00000560959 FAM72AQ5TYM5 149 aa18.65■□□□□ 0.58
TPM1-226ENST00000560959 KCTD16Q68DU8 428 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms