RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 ITKQ08881 620 aa14.09□□□□□ -0.15
PKNOX1-209ENST00000560448 IL27RAQ6UWB1 636 aa14.09□□□□□ -0.15
PKNOX1-209ENST00000560448 ARMCX6Q7L4S7 300 aa14.09□□□□□ -0.15
PKNOX1-209ENST00000560448 ALYREFQ86V81 257 aaKnown RBP14.09□□□□□ -0.15
PKNOX1-209ENST00000560448 ZC3H18Q86VM9 953 aaKnown RBP14.09□□□□□ -0.15
PKNOX1-209ENST00000560448 IQCHQ86VS3 1027 aa14.09□□□□□ -0.15
PKNOX1-209ENST00000560448 CAMK1DQ8IU85 385 aa14.09□□□□□ -0.15
PKNOX1-209ENST00000560448 PAF1Q8N7H5 531 aa14.09□□□□□ -0.15
PKNOX1-209ENST00000560448 C12orf50Q8NA57 414 aaPredicted RBP14.09□□□□□ -0.15
PKNOX1-209ENST00000560448 DENND6BQ8NEG7 585 aa14.09□□□□□ -0.15
PKNOX1-209ENST00000560448 TEKT5Q96M29 485 aa14.09□□□□□ -0.15
PKNOX1-209ENST00000560448 SRPK1Q96SB4 655 aaKnown RBP14.09□□□□□ -0.15
PKNOX1-209ENST00000560448 PARD6BQ9BYG5 372 aa14.09□□□□□ -0.15
PKNOX1-209ENST00000560448 SLC25A51Q9H1U9 297 aa14.09□□□□□ -0.15
PKNOX1-209ENST00000560448 HOMER3Q9NSC5 361 aa14.09□□□□□ -0.15
PKNOX1-209ENST00000560448 SAE1Q9UBE0 346 aaPredicted RBP14.09□□□□□ -0.15
PKNOX1-209ENST00000560448 SLC6A14Q9UN76 642 aa14.09□□□□□ -0.15
PKNOX1-209ENST00000560448 PPIL1Q9Y3C6 166 aa14.09□□□□□ -0.15
PKNOX1-209ENST00000560448 H7C0C1 242 aa14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 KCNK3O14649 394 aa14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 FZD6O60353 706 aa14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 PGLSO95336 258 aa14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 SYPP08247 313 aa14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 TIMP2P16035 220 aa14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 SDHBP21912 280 aa14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 HNRNPA2B1P22626 353 aaKnown RBP14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 PTPN3P26045 913 aa14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 STIP1P31948 543 aaKnown RBP14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 ATP5OP48047 213 aa14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 EIF3EP60228 445 aaKnown RBP14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 MAXP61244 160 aa14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 ARHGAP8P85298 464 aa14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 SPEM2Q0P670 501 aa14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 ZBTB17Q13105 803 aa14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 ZNF211Q13398 564 aaPredicted RBP14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 AGERQ15109 404 aa14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 TMEM52BQ4KMG9 183 aa14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 TMEM259Q4ZIN3 620 aa14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 TRIM61Q5EBN2 209 aa14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 ITPRIPL1Q6GPH6 555 aa14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 NAPEPLDQ6IQ20 393 aa14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 PRR23CQ6ZRP0 262 aa14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 USP45Q70EL2 814 aa14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 MTERF4Q7Z6M4 381 aaKnown RBP14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 SLC13A5Q86YT5 568 aaPredicted RBP14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 MMGT1Q8N4V1 131 aa14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 CNTD1Q8N815 330 aa14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 C1orf216Q8TAB5 229 aa14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 ARRDC2Q8TBH0 407 aa14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 CXorf40AQ8TE69 158 aa14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 SNX19Q92543 992 aa14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 IMP4Q96G21 291 aaKnown RBP14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 PBKQ96KB5 322 aa14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 LENG8Q96PV6 779 aaPredicted RBP14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 NAP1L3Q99457 506 aaPredicted RBP14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 TDRD1Q9BXT4 1180 aaKnown RBP14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 ADGRE3Q9BY15 652 aa14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 EIF2B4Q9UI10 523 aaKnown RBP14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 RAB21Q9UL25 225 aa14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 TTLL3Q9Y4R7 772 aa14.08□□□□□ -0.15
PKNOX1-209ENST00000560448 NUMA1Q14980 2115 aa14.08□□□□□ -0.16
PKNOX1-209ENST00000560448 RALGAPA1Q6GYQ0 2036 aa14.08□□□□□ -0.16
PKNOX1-209ENST00000560448 ANKRD36A6QL64 1941 aa14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 A0A1W2PQU0 124 aa14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 PSMD11O00231 422 aa14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 RNF103O00237 685 aa14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 PLK4O00444 970 aa14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 CPP00450 1065 aa14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 CYP2A6P11509 494 aaPredicted RBP14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 TGM1P22735 817 aa14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 MMP12P39900 470 aa14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 ABL2P42684 1182 aa14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 TNNT3P45378 269 aaPredicted RBP14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 SGCGQ13326 291 aa14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 DEFB119Q8N690 84 aa14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 SPATA4Q8NEY3 305 aa14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 LRRC45Q96CN5 670 aa14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 SCRN2Q96FV2 425 aa14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 MS4A14Q96JA4 679 aa14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 C1QTNF2Q9BXJ5 285 aa14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 CAPN10Q9HC96 672 aa14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 TMEM74BQ9NUR3 256 aa14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 SEPT10Q9P0V9 454 aa14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 KLHL8Q9P2G9 620 aaPredicted RBP14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 PCDHB9Q9Y5E1 797 aa14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 PCDHGC4Q9Y5F7 938 aa14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 RAI2Q9Y5P3 530 aa14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 VILLO15195 856 aa14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 DFNA5O60443 496 aa14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 OPHN1O60890 802 aa14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 TM7SF2O76062 418 aa14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 EPOP01588 193 aa14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 ZNF30P17039 623 aa14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 AKT2P31751 481 aa14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 PPP2CBP62714 309 aa14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 PPP2CAP67775 309 aa14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 DSC2Q02487 901 aa14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 WASHC5Q12768 1159 aa14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 TRAF2Q12933 501 aa14.07□□□□□ -0.16
PKNOX1-209ENST00000560448 LLGL1Q15334 1064 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms