RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 SUMF1Q8NBK3 374 aa12.14□□□□□ -0.47
RABGGTA-215ENST00000560207 CCHCR1Q8TD31 782 aa12.14□□□□□ -0.47
RABGGTA-215ENST00000560207 CXorf40AQ8TE69 158 aa12.14□□□□□ -0.47
RABGGTA-215ENST00000560207 TADA1Q96BN2 335 aa12.14□□□□□ -0.47
RABGGTA-215ENST00000560207 C19orf43Q9BQ61 176 aa12.14□□□□□ -0.47
RABGGTA-215ENST00000560207 PCDH9Q9HC56 1237 aa12.14□□□□□ -0.47
RABGGTA-215ENST00000560207 HACD3Q9P035 362 aa12.14□□□□□ -0.47
RABGGTA-215ENST00000560207 PAK5Q9P286 719 aa12.14□□□□□ -0.47
RABGGTA-215ENST00000560207 PCDHB9Q9Y5E1 797 aa12.14□□□□□ -0.47
RABGGTA-215ENST00000560207 PCDHGC4Q9Y5F7 938 aa12.14□□□□□ -0.47
RABGGTA-215ENST00000560207 FADS3Q9Y5Q0 445 aa12.14□□□□□ -0.47
RABGGTA-215ENST00000560207 LRRK1Q38SD2 2015 aa12.14□□□□□ -0.47
RABGGTA-215ENST00000560207 A0A1W2PPC4 97 aa12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 ANKRD66B4E2M5 251 aa12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 C10orf142B7Z368 130 aa12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 PRAMEF26H0Y7S4 382 aa12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 NDC80O14777 642 aa12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 PIGNO95427 931 aa12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 GAS8O95995 478 aa12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 PYGLP06737 847 aa12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 HLA-DPA1P20036 260 aa12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 CD86P42081 329 aa12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 FNTAP49354 379 aa12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 DHPSP49366 369 aaPredicted RBP12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 SKOR1P84550 965 aa12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 DSC2Q02487 901 aa12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 ARHGEF7Q14155 803 aa12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 TEAD4Q15561 434 aa12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 PEAR1Q5VY43 1037 aaPredicted RBP12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 NYAP1Q6ZVC0 841 aa12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 DPPA4Q7L190 304 aa12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 GSTA5Q7RTV2 222 aa12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 LINC00523Q86TU6 105 aa12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 IQCHQ86VS3 1027 aa12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 DCP2Q8IU60 420 aaKnown RBP12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 RGL4Q8IZJ4 473 aa12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 FAM71DQ8N9W8 422 aa12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 DENND6BQ8NEG7 585 aa12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 PDCD6IPQ8WUM4 868 aaKnown RBP12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 RUBCNQ92622 972 aa12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 ERLEC1Q96DZ1 483 aa12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 HSPA12BQ96MM6 686 aa12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 LENG8Q96PV6 779 aaPredicted RBP12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 MCCC1Q96RQ3 725 aaPredicted RBP12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 WDR24Q96S15 920 aa12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 LYSMD1Q96S90 227 aa12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 TMEM121Q9BTD3 319 aa12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 MLPHQ9BV36 600 aaPredicted RBP12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 FSD1LQ9BXM9 530 aa12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 ZDHHC5Q9C0B5 715 aa12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 CDH19Q9H159 772 aa12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 TRABDQ9H4I3 376 aa12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 RAD18Q9NS91 495 aa12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 NCDNQ9UBB6 729 aa12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 SERGEFQ9UGK8 458 aa12.13□□□□□ -0.47
RABGGTA-215ENST00000560207 CACNA1EQ15878 2313 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 PLXNA2O75051 1894 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 A0A0J9YYE9 177 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 A0A1B0GTW7 788 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 TCRBV7S2A1N4TA0A589 114 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 RGSL1A5PLK6 1076 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 TM7SF2O76062 418 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 NDST3O95803 873 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 TRBC1P01850 177 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 FGF1P05230 155 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 NFKB1P19838 968 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 BCKDHBP21953 392 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 GKP32189 559 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 MMP12P39900 470 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 TAS2R38P59533 333 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 RACK1P63244 317 aaKnown RBP12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 CDK16Q00536 496 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 PDE1BQ01064 536 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 NIPAL4Q0D2K0 466 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 TRAF2Q12933 501 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 LAMB3Q13751 1172 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 SIX1Q15475 284 aaPredicted RBP12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 DUOXA1Q1HG43 343 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 TMEM259Q4ZIN3 620 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 ARMC3Q5W041 872 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 NAPEPLDQ6IQ20 393 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 SYDE1Q6ZW31 735 aaPredicted RBP12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 TMEFF1Q8IYR6 380 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 PIH1D2Q8WWB5 315 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 C1orf54Q8WWF1 131 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 MAGOHBQ96A72 148 aaKnown RBP12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 VOPP1Q96AW1 172 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 BIRC7Q96CA5 298 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 RMDN1Q96DB5 314 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 RBM15Q96T37 977 aaKnown RBP eCLIP12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 C1QTNF2Q9BXJ5 285 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 SLC17A9Q9BYT1 436 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 C6orf106Q9H6K1 298 aaPredicted RBP12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 LRRC40Q9H9A6 602 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 MAGEE1Q9HCI5 957 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 PCDH12Q9NPG4 1184 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 INVSQ9Y283 1065 aa12.12□□□□□ -0.47
RABGGTA-215ENST00000560207 R3HDM2Q9Y2K5 976 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms