RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 NOD2Q9HC29 1040 aa13.31□□□□□ -0.28
SMAD3-213ENST00000560175 DDX56Q9NY93 547 aaKnown RBP13.31□□□□□ -0.28
SMAD3-213ENST00000560175 SALL4Q9UJQ4 1053 aa13.31□□□□□ -0.28
SMAD3-213ENST00000560175 ATP8A1Q9Y2Q0 1164 aa13.31□□□□□ -0.28
SMAD3-213ENST00000560175 RCCD1A6NED2 376 aa13.3□□□□□ -0.28
SMAD3-213ENST00000560175 TMEM110-MUSTN1A8MSY1 372 aa13.3□□□□□ -0.28
SMAD3-213ENST00000560175 PJA2O43164 708 aa13.3□□□□□ -0.28
SMAD3-213ENST00000560175 TNFSF14O43557 240 aa13.3□□□□□ -0.28
SMAD3-213ENST00000560175 FZD6O60353 706 aa13.3□□□□□ -0.28
SMAD3-213ENST00000560175 FTH1P19P0C7X4 201 aa13.3□□□□□ -0.28
SMAD3-213ENST00000560175 GM2AP17900 193 aa13.3□□□□□ -0.28
SMAD3-213ENST00000560175 MX2P20592 715 aa13.3□□□□□ -0.28
SMAD3-213ENST00000560175 COMTP21964 271 aa13.3□□□□□ -0.28
SMAD3-213ENST00000560175 IGFALSP35858 605 aa13.3□□□□□ -0.28
SMAD3-213ENST00000560175 IL9RQ01113 521 aa13.3□□□□□ -0.28
SMAD3-213ENST00000560175 PPIDQ08752 370 aaKnown RBP13.3□□□□□ -0.28
SMAD3-213ENST00000560175 ZNF235Q14590 738 aa13.3□□□□□ -0.28
SMAD3-213ENST00000560175 WSCD2Q2TBF2 565 aa13.3□□□□□ -0.28
SMAD3-213ENST00000560175 LIPIQ6XZB0 460 aa13.3□□□□□ -0.28
SMAD3-213ENST00000560175 GATAD2AQ86YP4 633 aa13.3□□□□□ -0.28
SMAD3-213ENST00000560175 CXorf40AQ8TE69 158 aa13.3□□□□□ -0.28
SMAD3-213ENST00000560175 NSMCE1Q8WV22 266 aa13.3□□□□□ -0.28
SMAD3-213ENST00000560175 MYOCQ99972 504 aa13.3□□□□□ -0.28
SMAD3-213ENST00000560175 TMEM121BQ9BXQ6 578 aaPredicted RBP13.3□□□□□ -0.28
SMAD3-213ENST00000560175 MBNL1Q9NR56 388 aaKnown RBP13.3□□□□□ -0.28
SMAD3-213ENST00000560175 IMPACTQ9P2X3 320 aa13.3□□□□□ -0.28
SMAD3-213ENST00000560175 REXO2Q9Y3B8 237 aaKnown RBP13.3□□□□□ -0.28
SMAD3-213ENST00000560175 PCDHGC4Q9Y5F7 938 aa13.3□□□□□ -0.28
SMAD3-213ENST00000560175 WDFY3Q8IZQ1 3526 aa13.3□□□□□ -0.28
SMAD3-213ENST00000560175 GOLGA4Q13439 2230 aaKnown RBP13.29□□□□□ -0.28
SMAD3-213ENST00000560175 AKAP13Q12802 2813 aa13.29□□□□□ -0.28
SMAD3-213ENST00000560175 TTC24A2A3L6 582 aaPredicted RBP13.29□□□□□ -0.28
SMAD3-213ENST00000560175 LRRD1A4D1F6 860 aa13.29□□□□□ -0.28
SMAD3-213ENST00000560175 SOWAHDA6NJG2 315 aa13.29□□□□□ -0.28
SMAD3-213ENST00000560175 PSTPIP1O43586 416 aa13.29□□□□□ -0.28
SMAD3-213ENST00000560175 TOP3BO95985 862 aaKnown RBP13.29□□□□□ -0.28
SMAD3-213ENST00000560175 CSF2P04141 144 aa13.29□□□□□ -0.28
SMAD3-213ENST00000560175 ITGAVP06756 1048 aa13.29□□□□□ -0.28
SMAD3-213ENST00000560175 C6P13671 934 aa13.29□□□□□ -0.28
SMAD3-213ENST00000560175 CCNB1P14635 433 aa13.29□□□□□ -0.28
SMAD3-213ENST00000560175 KCNA4P22459 653 aa13.29□□□□□ -0.28
SMAD3-213ENST00000560175 DGKAP23743 735 aa13.29□□□□□ -0.28
SMAD3-213ENST00000560175 GJC1P36383 396 aa13.29□□□□□ -0.28
SMAD3-213ENST00000560175 CDKN2BP42772 138 aa13.29□□□□□ -0.28
SMAD3-213ENST00000560175 LIG3P49916 1009 aa13.29□□□□□ -0.28
SMAD3-213ENST00000560175 PEX5P50542 639 aa13.29□□□□□ -0.28
SMAD3-213ENST00000560175 TRAF2Q12933 501 aa13.29□□□□□ -0.28
SMAD3-213ENST00000560175 SPA17Q15506 151 aa13.29□□□□□ -0.28
SMAD3-213ENST00000560175 INAVAQ3KP66 663 aa13.29□□□□□ -0.28
SMAD3-213ENST00000560175 TPRG1LQ5T0D9 272 aa13.29□□□□□ -0.28
SMAD3-213ENST00000560175 C11orf63Q6NUN7 778 aa13.29□□□□□ -0.28
SMAD3-213ENST00000560175 ERAP2Q6P179 960 aa13.29□□□□□ -0.28
SMAD3-213ENST00000560175 RAD9BQ6WBX8 426 aa13.29□□□□□ -0.28
SMAD3-213ENST00000560175 DPPA4Q7L190 304 aa13.29□□□□□ -0.28
SMAD3-213ENST00000560175 TPCN2Q8NHX9 752 aa13.29□□□□□ -0.28
SMAD3-213ENST00000560175 ARRDC2Q8TBH0 407 aa13.29□□□□□ -0.28
SMAD3-213ENST00000560175 PIH1D2Q8WWB5 315 aa13.29□□□□□ -0.28
SMAD3-213ENST00000560175 SCRN2Q96FV2 425 aa13.29□□□□□ -0.28
SMAD3-213ENST00000560175 OLFM3Q96PB7 478 aa13.29□□□□□ -0.28
SMAD3-213ENST00000560175 MCCC1Q96RQ3 725 aaPredicted RBP13.29□□□□□ -0.28
SMAD3-213ENST00000560175 IL12RB2Q99665 862 aa13.29□□□□□ -0.28
SMAD3-213ENST00000560175 C1QTNF7Q9BXJ2 289 aa13.29□□□□□ -0.28
SMAD3-213ENST00000560175 LUC7LQ9NQ29 371 aaKnown RBP13.29□□□□□ -0.28
SMAD3-213ENST00000560175 SCUBE2Q9NQ36 999 aa13.29□□□□□ -0.28
SMAD3-213ENST00000560175 PHTF1Q9UMS5 762 aa13.29□□□□□ -0.28
SMAD3-213ENST00000560175 APOBEC2Q9Y235 224 aaKnown RBP13.29□□□□□ -0.28
SMAD3-213ENST00000560175 PIAS2O75928 621 aa13.28□□□□□ -0.28
SMAD3-213ENST00000560175 PGLSO95336 258 aa13.28□□□□□ -0.28
SMAD3-213ENST00000560175 HOXC4P09017 264 aaPredicted RBP13.28□□□□□ -0.28
SMAD3-213ENST00000560175 C1SP09871 688 aa13.28□□□□□ -0.28
SMAD3-213ENST00000560175 ATXN1LP0C7T5 689 aaKnown RBP13.28□□□□□ -0.28
SMAD3-213ENST00000560175 NME1P15531 152 aaKnown RBP13.28□□□□□ -0.28
SMAD3-213ENST00000560175 ZFXP17010 805 aaPredicted RBP13.28□□□□□ -0.28
SMAD3-213ENST00000560175 XPAP23025 273 aaPredicted RBP13.28□□□□□ -0.28
SMAD3-213ENST00000560175 MAXP61244 160 aa13.28□□□□□ -0.28
SMAD3-213ENST00000560175 IFI35P80217 286 aaPredicted RBP13.28□□□□□ -0.28
SMAD3-213ENST00000560175 EIF2B5Q13144 721 aaKnown RBP13.28□□□□□ -0.28
SMAD3-213ENST00000560175 ZNF211Q13398 564 aaPredicted RBP13.28□□□□□ -0.28
SMAD3-213ENST00000560175 LRRC14Q15048 493 aa13.28□□□□□ -0.28
SMAD3-213ENST00000560175 MFSD7Q6UXD7 560 aa13.28□□□□□ -0.28
SMAD3-213ENST00000560175 KATNAL2Q8IYT4 538 aa13.28□□□□□ -0.28
SMAD3-213ENST00000560175 CNTD1Q8N815 330 aa13.28□□□□□ -0.28
SMAD3-213ENST00000560175 TBATAQ96M53 351 aa13.28□□□□□ -0.28
SMAD3-213ENST00000560175 WRAP53Q9BUR4 548 aaKnown RBP13.28□□□□□ -0.28
SMAD3-213ENST00000560175 SCNM1Q9BWG6 230 aa13.28□□□□□ -0.28
SMAD3-213ENST00000560175 POLR1EQ9GZS1 481 aaKnown RBP13.28□□□□□ -0.28
SMAD3-213ENST00000560175 BRD8Q9H0E9 1235 aa13.28□□□□□ -0.28
SMAD3-213ENST00000560175 NT5MQ9NPB1 228 aa13.28□□□□□ -0.28
SMAD3-213ENST00000560175 RBM22Q9NW64 420 aaKnown RBP eCLIP13.28□□□□□ -0.28
SMAD3-213ENST00000560175 KLF15Q9UIH9 416 aa13.28□□□□□ -0.28
SMAD3-213ENST00000560175 TFR2Q9UP52 801 aa13.28□□□□□ -0.28
SMAD3-213ENST00000560175 MSRB2Q9Y3D2 182 aa13.28□□□□□ -0.28
SMAD3-213ENST00000560175 HYOU1Q9Y4L1 999 aa13.28□□□□□ -0.28
SMAD3-213ENST00000560175 NEUROG3Q9Y4Z2 214 aa13.28□□□□□ -0.28
SMAD3-213ENST00000560175 PCDHGA1Q9Y5H4 931 aa13.28□□□□□ -0.28
SMAD3-213ENST00000560175 CSNK1G3Q9Y6M4 447 aa13.28□□□□□ -0.28
SMAD3-213ENST00000560175 LRP4O75096 1905 aa13.28□□□□□ -0.28
SMAD3-213ENST00000560175 FRYQ5TBA9 3013 aa13.28□□□□□ -0.28
SMAD3-213ENST00000560175 MAP3K6O95382 1288 aa13.27□□□□□ -0.29
SMAD3-213ENST00000560175 PRLP01236 227 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms