RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 HERC4Q5GLZ8 1057 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 NHSL2Q5HYW2 709 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 C10orf120Q5SQS8 335 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 ANKRD20A3Q5VUR7 823 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 IL23RQ5VWK5 629 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 DAB2IPQ5VWQ8 1189 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 STYK1Q6J9G0 422 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 MTFR2Q6P444 385 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 TRAT1Q6PIZ9 186 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 SYT10Q6XYQ8 523 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 ZNF813Q6ZN06 617 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 C3orf62Q6ZUJ4 267 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 DENND5BQ6ZUT9 1274 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 EFL1Q7Z2Z2 1120 aaKnown RBP4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 LONP2Q86WA8 852 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 MB21D2Q8IYB1 491 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 IQCKQ8N0W5 287 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 GHDCQ8N2G8 530 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 TMEM145Q8NBT3 493 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 OR10Z1Q8NGY1 313 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 HEXDCQ8WVB3 486 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 TSEN15Q8WW01 171 aaKnown RBP4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 PRPF31Q8WWY3 499 aaKnown RBP4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 BRF1Q92994 677 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 RNF125Q96EQ8 232 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 C1orf159Q96HA4 380 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 METTL2AQ96IZ6 378 aaKnown RBP4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 VCPIP1Q96JH7 1222 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 CCDC42Q96M95 316 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 ANKRD27Q96NW4 1050 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 RIT2Q99578 217 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 CD244Q9BZW8 370 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 ZNF518BQ9C0D4 1074 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 KLC2Q9H0B6 622 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 LRMDAQ9H2I8 198 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 OPA3Q9H6K4 179 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 COQ10BQ9H8M1 238 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 SLC38A10Q9HBR0 1119 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 MBNL1Q9NR56 388 aaKnown RBP4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 ARMC1Q9NVT9 282 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 THAP1Q9NVV9 213 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 SOHLH2Q9NX45 425 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 CYP39A1Q9NYL5 469 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 NKIRAS1Q9NYS0 192 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 ANKMY1Q9P2S6 941 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 KLHL3Q9UH77 587 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 OGDHLQ9ULD0 1010 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 EMC9Q9Y3B6 208 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 RUSC2Q8N2Y8 1516 aa4.56□□□□□ -1.68
HMGB3P26-201ENST00000560051 FAM149AA5PLN7 773 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 CCDC154A6NI56 674 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 SRRM3A6NNA2 597 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 FOXO6A8MYZ6 492 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 ISM1B1AKI9 464 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 ERVV-2B6SEH9 535 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 ARVCFO00192 962 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 NOP56O00567 594 aaKnown RBP4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 PRPF4O43172 522 aaKnown RBP eCLIP4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 LRRTM2O43300 516 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 PPIP5K2O43314 1243 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 ADAM20O43506 726 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 ECE2O60344 883 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 STX10O60499 249 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 PSIP1O75475 530 aaKnown RBP4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 ZNF821O75541 412 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 PDE5AO76074 875 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 LUC7L3O95232 432 aaKnown RBP4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 DIRAS3O95661 229 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 MBD3O95983 291 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 TUBB4AP04350 444 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 INHBAP08476 426 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 ITGA5P08648 1049 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 KRT19P08727 400 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 ODC1P11926 461 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 SRCP12931 536 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 NCF1P14598 390 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 PDE6AP16499 860 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 GPTP24298 496 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 TM4SF1P30408 202 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 HLA-FP30511 346 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 HMOX2P30519 316 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 CLCNKAP51800 687 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 SEC24CP53992 1094 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 P2RX3P56373 397 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 KIAA1024LP59773 190 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 MRPS25P82663 173 aaKnown RBP4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 AMPD2Q01433 879 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 DUSP4Q13115 394 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 CAPRIN1Q14444 709 aaKnown RBP4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 RPS6KA1Q15418 735 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 NR0B2Q15466 257 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 DGKDQ16760 1214 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 ARHGAP44Q17R89 818 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 PRSS53Q2L4Q9 553 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 MTHFSDQ2M296 383 aaKnown RBP4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 KLHL40Q2TBA0 621 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 ZNF829Q3KNS6 432 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 CDONQ4KMG0 1287 aa4.55□□□□□ -1.68
HMGB3P26-201ENST00000560051 ANKRD20A4Q4UJ75 823 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms