RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 PLRG1O43660 514 aaKnown RBP14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 TMEM63AO94886 807 aa14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 SEC31AO94979 1220 aaKnown RBP14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 NDST3O95803 873 aa14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 DNTTP04053 509 aa14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 ADRB3P13945 408 aa14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 HLA-DPA1P20036 260 aa14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 PSMA3P25788 255 aa14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 ACTN2P35609 894 aa14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 GRIA4P48058 902 aa14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 NEK3P51956 506 aa14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 POLR2LP62875 67 aaKnown RBP14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 DMWDQ09019 674 aa14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 GPS1Q13098 491 aa14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 PRPSAP1Q14558 356 aa14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 QPCTQ16769 361 aa14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 ARMC12Q5T9G4 340 aa14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 ANO7Q6IWH7 933 aa14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 HOOK3Q86VS8 718 aa14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 WDR5BQ86VZ2 330 aa14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 RYBPQ8N488 228 aaPredicted RBP14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 MCUQ8NE86 351 aa14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 HMGB4Q8WW32 186 aa14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 FAM126AQ9BYI3 521 aaPredicted RBP14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 KDM4CQ9H3R0 1056 aa14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 CASS4Q9NQ75 786 aa14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 RRAGDQ9NQL2 400 aaPredicted RBP14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 UBP1Q9NZI7 540 aa14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 DMGDHQ9UI17 866 aaKnown RBP14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 CHKBQ9Y259 395 aa14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 FADS3Q9Y5Q0 445 aa14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 SPTBN4Q9H254 2564 aa14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 LRRK1Q38SD2 2015 aa14.9□□□□□ -0.02
SNRPA1-207ENST00000559309 FAM186AA6NE01 2351 aa14.89□□□□□ -0.03
SNRPA1-207ENST00000559309 IGHV1OR15-9A0A0B4J2B8 117 aa14.89□□□□□ -0.03
SNRPA1-207ENST00000559309 PROB1E7EW31 1015 aa14.89□□□□□ -0.03
SNRPA1-207ENST00000559309 LAMTOR5O43504 91 aa14.89□□□□□ -0.03
SNRPA1-207ENST00000559309 ZNF217O75362 1048 aa14.89□□□□□ -0.03
SNRPA1-207ENST00000559309 PMPCBO75439 489 aa14.89□□□□□ -0.03
SNRPA1-207ENST00000559309 CPP00450 1065 aa14.89□□□□□ -0.03
SNRPA1-207ENST00000559309 AGTP01019 485 aa14.89□□□□□ -0.03
SNRPA1-207ENST00000559309 CA4P22748 312 aa14.89□□□□□ -0.03
SNRPA1-207ENST00000559309 MMP12P39900 470 aa14.89□□□□□ -0.03
SNRPA1-207ENST00000559309 RPL21P46778 160 aaKnown RBP14.89□□□□□ -0.03
SNRPA1-207ENST00000559309 CREB5Q02930 508 aa14.89□□□□□ -0.03
SNRPA1-207ENST00000559309 SFSWAPQ12872 951 aaKnown RBP14.89□□□□□ -0.03
SNRPA1-207ENST00000559309 RALGDSQ12967 914 aa14.89□□□□□ -0.03
SNRPA1-207ENST00000559309 OLIG2Q13516 323 aa14.89□□□□□ -0.03
SNRPA1-207ENST00000559309 AGERQ15109 404 aa14.89□□□□□ -0.03
SNRPA1-207ENST00000559309 PPP1R7Q15435 360 aa14.89□□□□□ -0.03
SNRPA1-207ENST00000559309 TTC31Q49AM3 519 aaPredicted RBP14.89□□□□□ -0.03
SNRPA1-207ENST00000559309 TMEM52BQ4KMG9 183 aa14.89□□□□□ -0.03
SNRPA1-207ENST00000559309 SIRPB2Q5JXA9 342 aa14.89□□□□□ -0.03
SNRPA1-207ENST00000559309 ANKRD22Q5VYY1 191 aa14.89□□□□□ -0.03
SNRPA1-207ENST00000559309 HIBCHQ6NVY1 386 aaPredicted RBP14.89□□□□□ -0.03
SNRPA1-207ENST00000559309 RAVER1Q8IY67 606 aaKnown RBP14.89□□□□□ -0.03
SNRPA1-207ENST00000559309 ZBTB44Q8NCP5 570 aa14.89□□□□□ -0.03
SNRPA1-207ENST00000559309 ERLEC1Q96DZ1 483 aa14.89□□□□□ -0.03
SNRPA1-207ENST00000559309 C19orf43Q9BQ61 176 aa14.89□□□□□ -0.03
SNRPA1-207ENST00000559309 TBL1YQ9BQ87 522 aa14.89□□□□□ -0.03
SNRPA1-207ENST00000559309 NEUROG2Q9H2A3 272 aa14.89□□□□□ -0.03
SNRPA1-207ENST00000559309 FBXL12Q9NXK8 326 aa14.89□□□□□ -0.03
SNRPA1-207ENST00000559309 WSB2Q9NYS7 404 aaPredicted RBP14.89□□□□□ -0.03
SNRPA1-207ENST00000559309 WHRNQ9P202 907 aa14.89□□□□□ -0.03
SNRPA1-207ENST00000559309 TPX2Q9ULW0 747 aaKnown RBP14.89□□□□□ -0.03
SNRPA1-207ENST00000559309 ZNF106Q9H2Y7 1883 aaKnown RBP14.89□□□□□ -0.03
SNRPA1-207ENST00000559309 A0A1W2PP55 124 aa14.88□□□□□ -0.03
SNRPA1-207ENST00000559309 GOLGA6CA6NDK9 693 aa14.88□□□□□ -0.03
SNRPA1-207ENST00000559309 GOLGA6BA6NDN3 693 aa14.88□□□□□ -0.03
SNRPA1-207ENST00000559309 CAPN8A6NHC0 703 aa14.88□□□□□ -0.03
SNRPA1-207ENST00000559309 F5H423 210 aaPredicted RBP14.88□□□□□ -0.03
SNRPA1-207ENST00000559309 SMAPO00193 183 aa14.88□□□□□ -0.03
SNRPA1-207ENST00000559309 PLK4O00444 970 aa14.88□□□□□ -0.03
SNRPA1-207ENST00000559309 GALR2O43603 387 aaPredicted RBP14.88□□□□□ -0.03
SNRPA1-207ENST00000559309 FGF1P05230 155 aa14.88□□□□□ -0.03
SNRPA1-207ENST00000559309 GOLGA6DP0CG33 693 aa14.88□□□□□ -0.03
SNRPA1-207ENST00000559309 MLNP12872 115 aa14.88□□□□□ -0.03
SNRPA1-207ENST00000559309 GM2AP17900 193 aa14.88□□□□□ -0.03
SNRPA1-207ENST00000559309 GRIA1P42261 906 aa14.88□□□□□ -0.03
SNRPA1-207ENST00000559309 CHRNA4P43681 627 aa14.88□□□□□ -0.03
SNRPA1-207ENST00000559309 ADPRHP54922 357 aa14.88□□□□□ -0.03
SNRPA1-207ENST00000559309 MRPS25P82663 173 aaKnown RBP14.88□□□□□ -0.03
SNRPA1-207ENST00000559309 DNTTIP2Q5QJE6 756 aaKnown RBP14.88□□□□□ -0.03
SNRPA1-207ENST00000559309 NAPEPLDQ6IQ20 393 aa14.88□□□□□ -0.03
SNRPA1-207ENST00000559309 C8orf74Q6P047 294 aa14.88□□□□□ -0.03
SNRPA1-207ENST00000559309 TSSK4Q6SA08 328 aa14.88□□□□□ -0.03
SNRPA1-207ENST00000559309 DPPA4Q7L190 304 aa14.88□□□□□ -0.03
SNRPA1-207ENST00000559309 LINC00523Q86TU6 105 aa14.88□□□□□ -0.03
SNRPA1-207ENST00000559309 CAND1Q86VP6 1230 aaKnown RBP14.88□□□□□ -0.03
SNRPA1-207ENST00000559309 LONP2Q86WA8 852 aa14.88□□□□□ -0.03
SNRPA1-207ENST00000559309 PPIL6Q8IXY8 311 aa14.88□□□□□ -0.03
SNRPA1-207ENST00000559309 HDDC3Q8N4P3 179 aa14.88□□□□□ -0.03
SNRPA1-207ENST00000559309 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.88□□□□□ -0.03
SNRPA1-207ENST00000559309 IPMKQ8NFU5 416 aa14.88□□□□□ -0.03
SNRPA1-207ENST00000559309 LRRC45Q96CN5 670 aa14.88□□□□□ -0.03
SNRPA1-207ENST00000559309 SMIM14Q96QK8 99 aa14.88□□□□□ -0.03
SNRPA1-207ENST00000559309 FICDQ9BVA6 458 aa14.88□□□□□ -0.03
SNRPA1-207ENST00000559309 ADGRE3Q9BY15 652 aa14.88□□□□□ -0.03
SNRPA1-207ENST00000559309 SGK2Q9HBY8 427 aa14.88□□□□□ -0.03
SNRPA1-207ENST00000559309 MAGEE1Q9HCI5 957 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms