RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 P3H4Q92791 437 aa18.84■□□□□ 0.61
CASC4-209ENST00000559222 AGAP3Q96P47 875 aa18.84■□□□□ 0.61
CASC4-209ENST00000559222 QKIQ96PU8 341 aaKnown RBP eCLIP18.84■□□□□ 0.612e-7■□□□□ 9.9
CASC4-209ENST00000559222 BRD8Q9H0E9 1235 aa18.84■□□□□ 0.61
CASC4-209ENST00000559222 TMEM9BQ9NQ34 198 aa18.84■□□□□ 0.61
CASC4-209ENST00000559222 ANKRD6Q9Y2G4 727 aa18.84■□□□□ 0.61
CASC4-209ENST00000559222 FNDC3AQ9Y2H6 1198 aaKnown RBP18.84■□□□□ 0.61
CASC4-209ENST00000559222 PCDHB9Q9Y5E1 797 aa18.84■□□□□ 0.61
CASC4-209ENST00000559222 RAI2Q9Y5P3 530 aa18.84■□□□□ 0.61
CASC4-209ENST00000559222 ASCC3Q8N3C0 2202 aaKnown RBP18.84■□□□□ 0.61
CASC4-209ENST00000559222 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.83■□□□□ 0.6
CASC4-209ENST00000559222 MIF4GDA9UHW6 222 aaKnown RBP18.83■□□□□ 0.6
CASC4-209ENST00000559222 PRR5-ARHGAP8B1AHC4 643 aa18.83■□□□□ 0.6
CASC4-209ENST00000559222 APOC4-APOC2K7ER74 178 aa18.83■□□□□ 0.6
CASC4-209ENST00000559222 TSPAN6O43657 245 aa18.83■□□□□ 0.6
CASC4-209ENST00000559222 SOCS5O75159 536 aa18.83■□□□□ 0.6
CASC4-209ENST00000559222 PGLSO95336 258 aa18.83■□□□□ 0.6
CASC4-209ENST00000559222 PAK4O96013 591 aaPredicted RBP18.83■□□□□ 0.6
CASC4-209ENST00000559222 CPP00450 1065 aa18.83■□□□□ 0.6
CASC4-209ENST00000559222 APOC2P02655 101 aa18.83■□□□□ 0.6
CASC4-209ENST00000559222 GM2AP17900 193 aa18.83■□□□□ 0.6
CASC4-209ENST00000559222 XPAP23025 273 aaPredicted RBP18.83■□□□□ 0.6
CASC4-209ENST00000559222 CD38P28907 300 aa18.83■□□□□ 0.6
CASC4-209ENST00000559222 NR2C2P49116 596 aa18.83■□□□□ 0.6
CASC4-209ENST00000559222 RPS21P63220 83 aaKnown RBP18.83■□□□□ 0.6
CASC4-209ENST00000559222 SKOR1P84550 965 aa18.83■□□□□ 0.6
CASC4-209ENST00000559222 GSE1Q14687 1217 aa18.83■□□□□ 0.6
CASC4-209ENST00000559222 UAP1L1Q3KQV9 507 aa18.83■□□□□ 0.6
CASC4-209ENST00000559222 TMEM52BQ4KMG9 183 aa18.83■□□□□ 0.6
CASC4-209ENST00000559222 SPATS2Q86XZ4 545 aaKnown RBP18.83■□□□□ 0.6
CASC4-209ENST00000559222 HCAR2Q8TDS4 363 aa18.83■□□□□ 0.6
CASC4-209ENST00000559222 TFB1MQ8WVM0 346 aaKnown RBP18.83■□□□□ 0.6
CASC4-209ENST00000559222 FEM1CQ96JP0 617 aa18.83■□□□□ 0.6
CASC4-209ENST00000559222 KLF6Q99612 283 aaPredicted RBP18.83■□□□□ 0.6
CASC4-209ENST00000559222 C1QTNF2Q9BXJ5 285 aa18.83■□□□□ 0.6
CASC4-209ENST00000559222 SLC17A9Q9BYT1 436 aa18.83■□□□□ 0.6
CASC4-209ENST00000559222 B4GALT6Q9UBX8 382 aa18.83■□□□□ 0.6
CASC4-209ENST00000559222 CDV3Q9UKY7 258 aaKnown RBP18.83■□□□□ 0.6
CASC4-209ENST00000559222 DMTF1Q9Y222 760 aa18.83■□□□□ 0.6
CASC4-209ENST00000559222 R3HDM2Q9Y2K5 976 aaKnown RBP18.83■□□□□ 0.6
CASC4-209ENST00000559222 DCHS1Q96JQ0 3298 aa18.83■□□□□ 0.6
CASC4-209ENST00000559222 DNAH14Q0VDD8 3507 aa18.82■□□□□ 0.6
CASC4-209ENST00000559222 GOLGA8CPA6NN73 597 aa18.82■□□□□ 0.6
CASC4-209ENST00000559222 SLC30A4O14863 429 aa18.82■□□□□ 0.6
CASC4-209ENST00000559222 VILLO15195 856 aa18.82■□□□□ 0.6
CASC4-209ENST00000559222 FZD6O60353 706 aa18.82■□□□□ 0.6
CASC4-209ENST00000559222 PRLP01236 227 aa18.82■□□□□ 0.6
CASC4-209ENST00000559222 PTMAP06454 111 aaKnown RBP18.82■□□□□ 0.6
CASC4-209ENST00000559222 ALPIP09923 528 aa18.82■□□□□ 0.6
CASC4-209ENST00000559222 C6P13671 934 aa18.82■□□□□ 0.6
CASC4-209ENST00000559222 CTPS1P17812 591 aa18.82■□□□□ 0.6
CASC4-209ENST00000559222 HNRNPA2B1P22626 353 aaKnown RBP18.82■□□□□ 0.6
CASC4-209ENST00000559222 CD68P34810 354 aaPredicted RBP18.82■□□□□ 0.6
CASC4-209ENST00000559222 CD86P42081 329 aa18.82■□□□□ 0.6
CASC4-209ENST00000559222 CTSKP43235 329 aa18.82■□□□□ 0.6
CASC4-209ENST00000559222 LIMK1P53667 647 aa18.82■□□□□ 0.6
CASC4-209ENST00000559222 FAM193AP78312 1265 aa18.82■□□□□ 0.6
CASC4-209ENST00000559222 ARHGAP8P85298 464 aa18.82■□□□□ 0.6
CASC4-209ENST00000559222 HLA-BQ31612 363 aa18.82■□□□□ 0.6
CASC4-209ENST00000559222 TPRG1LQ5T0D9 272 aa18.82■□□□□ 0.6
CASC4-209ENST00000559222 MEI1Q5TIA1 1274 aa18.82■□□□□ 0.6
CASC4-209ENST00000559222 ADAT2Q7Z6V5 191 aaKnown RBP18.82■□□□□ 0.6
CASC4-209ENST00000559222 REXO1L1PQ8IX06 675 aa18.82■□□□□ 0.6
CASC4-209ENST00000559222 UBL4BQ8N7F7 174 aa18.82■□□□□ 0.6
CASC4-209ENST00000559222 PAF1Q8N7H5 531 aa18.82■□□□□ 0.6
CASC4-209ENST00000559222 OR13H1Q8NG92 308 aa18.82■□□□□ 0.6
CASC4-209ENST00000559222 CXorf40AQ8TE69 158 aa18.82■□□□□ 0.6
CASC4-209ENST00000559222 PIH1D2Q8WWB5 315 aa18.82■□□□□ 0.6
CASC4-209ENST00000559222 RBM15Q96T37 977 aaKnown RBP eCLIP18.82■□□□□ 0.68e-6■■■■■ 30.1
CASC4-209ENST00000559222 MBNL1Q9NR56 388 aaKnown RBP18.82■□□□□ 0.6
CASC4-209ENST00000559222 DLL3Q9NYJ7 618 aa18.82■□□□□ 0.6
CASC4-209ENST00000559222 CHKBQ9Y259 395 aa18.82■□□□□ 0.6
CASC4-209ENST00000559222 DCDC2BA2VCK2 349 aa18.81■□□□□ 0.6
CASC4-209ENST00000559222 POM121BA6NF01 834 aa18.81■□□□□ 0.6
CASC4-209ENST00000559222 NPIPB15A6NHN6 443 aaPredicted RBP18.81■□□□□ 0.6
CASC4-209ENST00000559222 PRAMEF26H0Y7S4 382 aa18.81■□□□□ 0.6
CASC4-209ENST00000559222 FOXD2O60548 495 aaPredicted RBP18.81■□□□□ 0.6
CASC4-209ENST00000559222 NEBLO76041 1014 aa18.81■□□□□ 0.6
CASC4-209ENST00000559222 LHCGRP22888 699 aa18.81■□□□□ 0.6
CASC4-209ENST00000559222 RBL1P28749 1068 aa18.81■□□□□ 0.6
CASC4-209ENST00000559222 IGFALSP35858 605 aa18.81■□□□□ 0.6
CASC4-209ENST00000559222 LIG3P49916 1009 aa18.81■□□□□ 0.6
CASC4-209ENST00000559222 IL9RQ01113 521 aa18.81■□□□□ 0.6
CASC4-209ENST00000559222 KLF1Q13351 362 aaPredicted RBP18.81■□□□□ 0.6
CASC4-209ENST00000559222 TEAD4Q15561 434 aa18.81■□□□□ 0.6
CASC4-209ENST00000559222 SLC45A4Q5BKX6 768 aa18.81■□□□□ 0.6
CASC4-209ENST00000559222 RALGPS1Q5JS13 557 aa18.81■□□□□ 0.6
CASC4-209ENST00000559222 DPPA4Q7L190 304 aa18.81■□□□□ 0.6
CASC4-209ENST00000559222 TSPAN33Q86UF1 283 aa18.81■□□□□ 0.6
CASC4-209ENST00000559222 SPATA22Q8NHS9 363 aa18.81■□□□□ 0.6
CASC4-209ENST00000559222 BMFQ96LC9 184 aa18.81■□□□□ 0.6
CASC4-209ENST00000559222 TDRD1Q9BXT4 1180 aaKnown RBP18.81■□□□□ 0.6
CASC4-209ENST00000559222 GAREM1Q9H706 876 aa18.81■□□□□ 0.6
CASC4-209ENST00000559222 AMACRQ9UHK6 382 aa18.81■□□□□ 0.6
CASC4-209ENST00000559222 EFR3BQ9Y2G0 817 aa18.81■□□□□ 0.6
CASC4-209ENST00000559222 CACNA1AO00555 2505 aa18.81■□□□□ 0.6
CASC4-209ENST00000559222 H7C0C1 242 aa18.8■□□□□ 0.6
CASC4-209ENST00000559222 TM4SF5O14894 197 aa18.8■□□□□ 0.6
CASC4-209ENST00000559222 NRDCO43847 1150 aa18.8■□□□□ 0.6
CASC4-209ENST00000559222 SYPP08247 313 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms