RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 CCDC28BQ9BUN5 200 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 EML4Q9HC35 981 aaKnown RBP11.35□□□□□ -0.59
CLPX-204ENST00000559152 GPAMQ9HCL2 828 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 TCF7L2Q9NQB0 619 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 STOML1Q9UBI4 398 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 TTC3P53804 2025 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 A0A1B0GVM2 712 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 TCAF2A6NFQ2 919 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 TRPC5OSA6NMA1 111 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 ADAM12O43184 909 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 COCHO43405 550 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 RPP40O75818 363 aaKnown RBP11.35□□□□□ -0.59
CLPX-204ENST00000559152 PIGNO95427 931 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 PENKP01210 267 aaPredicted RBP11.35□□□□□ -0.59
CLPX-204ENST00000559152 TFEBP19484 476 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 SLC6A4P31645 630 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 CPA2P48052 419 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 NSUN2Q08J23 767 aaKnown RBP eCLIP11.35□□□□□ -0.59
CLPX-204ENST00000559152 ADGRF1Q5T601 910 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 CNKSR3Q6P9H4 555 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 ZNF783Q6ZMS7 281 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 ATG14Q6ZNE5 492 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 DENND1CQ8IV53 801 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 SLC22A9Q8IVM8 553 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 HERC6Q8IVU3 1022 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 CFAP52Q8N1V2 620 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 HEXDCQ8WVB3 486 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 FAR2Q96K12 515 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 POPDC3Q9HBV1 291 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 MAFFQ9ULX9 164 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 PLA2G4CQ9UP65 541 aa11.35□□□□□ -0.59
CLPX-204ENST00000559152 DOCK4Q8N1I0 1966 aa11.34□□□□□ -0.59
CLPX-204ENST00000559152 LATS1O95835 1130 aa11.34□□□□□ -0.59
CLPX-204ENST00000559152 S1PR4O95977 384 aa11.34□□□□□ -0.59
CLPX-204ENST00000559152 RHOCP08134 193 aa11.34□□□□□ -0.59
CLPX-204ENST00000559152 GM2AP17900 193 aa11.34□□□□□ -0.59
CLPX-204ENST00000559152 OGNP20774 298 aaKnown RBP11.34□□□□□ -0.59
CLPX-204ENST00000559152 HOXD9P28356 352 aaPredicted RBP11.34□□□□□ -0.59
CLPX-204ENST00000559152 CSHL1Q14406 222 aa11.34□□□□□ -0.59
CLPX-204ENST00000559152 KHDC1Q4VXA5 237 aaKnown RBP11.34□□□□□ -0.59
CLPX-204ENST00000559152 RFWD3Q6PCD5 774 aa11.34□□□□□ -0.59
CLPX-204ENST00000559152 BLOC1S5Q8TDH9 187 aa11.34□□□□□ -0.59
CLPX-204ENST00000559152 UBXN10Q96LJ8 280 aa11.34□□□□□ -0.59
CLPX-204ENST00000559152 FAM161BQ96MY7 647 aa11.34□□□□□ -0.59
CLPX-204ENST00000559152 SPON2Q9BUD6 331 aa11.34□□□□□ -0.59
CLPX-204ENST00000559152 CYP4F11Q9HBI6 524 aa11.34□□□□□ -0.59
CLPX-204ENST00000559152 IGSF5Q9NSI5 407 aa11.34□□□□□ -0.59
CLPX-204ENST00000559152 CDYLQ9Y232 598 aa11.34□□□□□ -0.59
CLPX-204ENST00000559152 A0A0D9SEW6 157 aa11.33□□□□□ -0.59
CLPX-204ENST00000559152 H3BNC9 293 aa11.33□□□□□ -0.59
CLPX-204ENST00000559152 CD3EAPO15446 510 aaKnown RBP11.33□□□□□ -0.59
CLPX-204ENST00000559152 UPP2O95045 317 aa11.33□□□□□ -0.59
CLPX-204ENST00000559152 THRAP10827 490 aa11.33□□□□□ -0.59
CLPX-204ENST00000559152 HMGA1P17096 107 aaKnown RBP11.33□□□□□ -0.59
CLPX-204ENST00000559152 GNAZP19086 355 aa11.33□□□□□ -0.59
CLPX-204ENST00000559152 GLDCP23378 1020 aa11.33□□□□□ -0.59
CLPX-204ENST00000559152 CORO1AP31146 461 aaKnown RBP11.33□□□□□ -0.59
CLPX-204ENST00000559152 RFC2P35250 354 aa11.33□□□□□ -0.59
CLPX-204ENST00000559152 GCKP35557 465 aa11.33□□□□□ -0.59
CLPX-204ENST00000559152 NUMBP49757 651 aa11.33□□□□□ -0.59
CLPX-204ENST00000559152 DSG1Q02413 1049 aa11.33□□□□□ -0.59
CLPX-204ENST00000559152 GALNT1Q10472 559 aaPredicted RBP11.33□□□□□ -0.59
CLPX-204ENST00000559152 DLG1Q12959 904 aa11.33□□□□□ -0.59
CLPX-204ENST00000559152 ZNF460Q14592 562 aa11.33□□□□□ -0.59
CLPX-204ENST00000559152 KPNB1Q14974 876 aaKnown RBP11.33□□□□□ -0.59
CLPX-204ENST00000559152 CCDC6Q16204 474 aa11.33□□□□□ -0.59
CLPX-204ENST00000559152 TECRLQ5HYJ1 363 aa11.33□□□□□ -0.59
CLPX-204ENST00000559152 SPOUT1Q5T280 376 aaKnown RBP11.33□□□□□ -0.59
CLPX-204ENST00000559152 VWA5B1Q5TIE3 1220 aa11.33□□□□□ -0.59
CLPX-204ENST00000559152 SLC39A5Q6ZMH5 540 aa11.33□□□□□ -0.59
CLPX-204ENST00000559152 DEFB128Q7Z7B8 93 aa11.33□□□□□ -0.59
CLPX-204ENST00000559152 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.33□□□□□ -0.59
CLPX-204ENST00000559152 ULK2Q8IYT8 1036 aa11.33□□□□□ -0.59
CLPX-204ENST00000559152 MYEOVQ96EZ4 313 aa11.33□□□□□ -0.59
CLPX-204ENST00000559152 TMEM169Q96HH4 297 aa11.33□□□□□ -0.59
CLPX-204ENST00000559152 NDNQ99608 321 aa11.33□□□□□ -0.59
CLPX-204ENST00000559152 CLSTN3Q9BQT9 956 aa11.33□□□□□ -0.59
CLPX-204ENST00000559152 THTPAQ9BU02 230 aa11.33□□□□□ -0.59
CLPX-204ENST00000559152 ARHGAP26Q9UNA1 814 aa11.33□□□□□ -0.59
CLPX-204ENST00000559152 TBC1D30Q9Y2I9 924 aa11.33□□□□□ -0.59
CLPX-204ENST00000559152 MUSKO15146 869 aa11.33□□□□□ -0.6
CLPX-204ENST00000559152 INSIG1O15503 277 aa11.33□□□□□ -0.6
CLPX-204ENST00000559152 STC2O76061 302 aa11.33□□□□□ -0.6
CLPX-204ENST00000559152 IPO13O94829 963 aaKnown RBP11.33□□□□□ -0.6
CLPX-204ENST00000559152 GJB5O95377 273 aa11.33□□□□□ -0.6
CLPX-204ENST00000559152 CHRNGP07510 517 aa11.33□□□□□ -0.6
CLPX-204ENST00000559152 CCDC166P0CW27 439 aa11.33□□□□□ -0.6
CLPX-204ENST00000559152 RPL17P18621 184 aaKnown RBP11.33□□□□□ -0.6
CLPX-204ENST00000559152 MPSTP25325 297 aa11.33□□□□□ -0.6
CLPX-204ENST00000559152 ELF1P32519 619 aa11.33□□□□□ -0.6
CLPX-204ENST00000559152 PFKPQ01813 784 aa11.33□□□□□ -0.6
CLPX-204ENST00000559152 IHHQ14623 411 aa11.33□□□□□ -0.6
CLPX-204ENST00000559152 NAA25Q14CX7 972 aa11.33□□□□□ -0.6
CLPX-204ENST00000559152 SLC9B1Q4ZJI4 515 aa11.33□□□□□ -0.6
CLPX-204ENST00000559152 RBM20Q5T481 1227 aaKnown RBP11.33□□□□□ -0.6
CLPX-204ENST00000559152 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.33□□□□□ -0.6
CLPX-204ENST00000559152 TRIM67Q6ZTA4 783 aa11.33□□□□□ -0.6
CLPX-204ENST00000559152 CCNYL1Q8N7R7 359 aa11.33□□□□□ -0.6
CLPX-204ENST00000559152 OR4L1Q8NH43 312 aa11.33□□□□□ -0.6
CLPX-204ENST00000559152 GIMAP7Q8NHV1 300 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms