RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 TJP3O95049 919 aa15.67■□□□□ 0.1
LINC01220-201ENST00000558575 UGT2B4P06133 528 aa15.67■□□□□ 0.1
LINC01220-201ENST00000558575 OXTRP30559 389 aa15.67■□□□□ 0.1
LINC01220-201ENST00000558575 SCNN1BP51168 640 aa15.67■□□□□ 0.1
LINC01220-201ENST00000558575 RENBPP51606 427 aa15.67■□□□□ 0.1
LINC01220-201ENST00000558575 TAS2R38P59533 333 aa15.67■□□□□ 0.1
LINC01220-201ENST00000558575 IFI35P80217 286 aaPredicted RBP15.67■□□□□ 0.1
LINC01220-201ENST00000558575 OTUD4Q01804 1114 aaKnown RBP15.67■□□□□ 0.1
LINC01220-201ENST00000558575 AP1B1Q10567 949 aa15.67■□□□□ 0.1
LINC01220-201ENST00000558575 SLC14A1Q13336 389 aa15.67■□□□□ 0.1
LINC01220-201ENST00000558575 NOMO1Q15155 1222 aa15.67■□□□□ 0.1
LINC01220-201ENST00000558575 TTC31Q49AM3 519 aaPredicted RBP15.67■□□□□ 0.1
LINC01220-201ENST00000558575 PIP5KL1Q5T9C9 394 aa15.67■□□□□ 0.1
LINC01220-201ENST00000558575 AGBL4Q5VU57 503 aa15.67■□□□□ 0.1
LINC01220-201ENST00000558575 TIGD7Q6NT04 549 aaPredicted RBP15.67■□□□□ 0.1
LINC01220-201ENST00000558575 NCEH1Q6PIU2 408 aa15.67■□□□□ 0.1
LINC01220-201ENST00000558575 TMPRSS7Q7RTY8 843 aa15.67■□□□□ 0.1
LINC01220-201ENST00000558575 ZC3H18Q86VM9 953 aaKnown RBP15.67■□□□□ 0.1
LINC01220-201ENST00000558575 CAMK1DQ8IU85 385 aa15.67■□□□□ 0.1
LINC01220-201ENST00000558575 LURAP1LQ8IV03 231 aa15.67■□□□□ 0.1
LINC01220-201ENST00000558575 SLC41A1Q8IVJ1 513 aa15.67■□□□□ 0.1
LINC01220-201ENST00000558575 ARRDC2Q8TBH0 407 aa15.67■□□□□ 0.1
LINC01220-201ENST00000558575 KLHL32Q96NJ5 620 aa15.67■□□□□ 0.1
LINC01220-201ENST00000558575 GPR174Q9BXC1 333 aa15.67■□□□□ 0.1
LINC01220-201ENST00000558575 BRD8Q9H0E9 1235 aa15.67■□□□□ 0.1
LINC01220-201ENST00000558575 CARD9Q9H257 536 aa15.67■□□□□ 0.1
LINC01220-201ENST00000558575 NOD2Q9HC29 1040 aa15.67■□□□□ 0.1
LINC01220-201ENST00000558575 KCND1Q9NSA2 647 aa15.67■□□□□ 0.1
LINC01220-201ENST00000558575 APOBEC2Q9Y235 224 aaKnown RBP15.67■□□□□ 0.1
LINC01220-201ENST00000558575 R3HDM2Q9Y2K5 976 aaKnown RBP15.67■□□□□ 0.1
LINC01220-201ENST00000558575 ATP8A1Q9Y2Q0 1164 aa15.67■□□□□ 0.1
LINC01220-201ENST00000558575 C16orf96A6NNT2 1141 aa15.66■□□□□ 0.1
LINC01220-201ENST00000558575 PPP1R12AO14974 1030 aaPredicted RBP15.66■□□□□ 0.1
LINC01220-201ENST00000558575 PIGNO95427 931 aa15.66■□□□□ 0.1
LINC01220-201ENST00000558575 HLA-DQB2P05538 268 aa15.66■□□□□ 0.1
LINC01220-201ENST00000558575 TIMP2P16035 220 aa15.66■□□□□ 0.1
LINC01220-201ENST00000558575 HSPA9P38646 679 aaKnown RBP15.66■□□□□ 0.1
LINC01220-201ENST00000558575 CETN2P41208 172 aa15.66■□□□□ 0.1
LINC01220-201ENST00000558575 RPL6Q02878 288 aaKnown RBP15.66■□□□□ 0.1
LINC01220-201ENST00000558575 NIPAL4Q0D2K0 466 aa15.66■□□□□ 0.1
LINC01220-201ENST00000558575 WASHC5Q12768 1159 aa15.66■□□□□ 0.1
LINC01220-201ENST00000558575 XRCC4Q13426 336 aa15.66■□□□□ 0.1
LINC01220-201ENST00000558575 ZNF235Q14590 738 aa15.66■□□□□ 0.1
LINC01220-201ENST00000558575 ZNF805Q5CZA5 627 aa15.66■□□□□ 0.1
LINC01220-201ENST00000558575 ALG1LQ6GMV1 187 aa15.66■□□□□ 0.1
LINC01220-201ENST00000558575 GDPD4Q6W3E5 623 aa15.66■□□□□ 0.1
LINC01220-201ENST00000558575 BZW1Q7L1Q6 419 aaKnown RBP15.66■□□□□ 0.1
LINC01220-201ENST00000558575 PARS2Q7L3T8 475 aaKnown RBP15.66■□□□□ 0.1
LINC01220-201ENST00000558575 GLRX5Q86SX6 157 aa15.66■□□□□ 0.1
LINC01220-201ENST00000558575 ZSWIM9Q86XI8 627 aa15.66■□□□□ 0.1
LINC01220-201ENST00000558575 SLC13A5Q86YT5 568 aaPredicted RBP15.66■□□□□ 0.1
LINC01220-201ENST00000558575 GANCQ8TET4 914 aa15.66■□□□□ 0.1
LINC01220-201ENST00000558575 NSMCE1Q8WV22 266 aa15.66■□□□□ 0.1
LINC01220-201ENST00000558575 TFB1MQ8WVM0 346 aaKnown RBP15.66■□□□□ 0.1
LINC01220-201ENST00000558575 NUDCD1Q96RS6 583 aa15.66■□□□□ 0.1
LINC01220-201ENST00000558575 OMDQ99983 421 aa15.66■□□□□ 0.1
LINC01220-201ENST00000558575 HDAC8Q9BY41 377 aa15.66■□□□□ 0.1
LINC01220-201ENST00000558575 CEP41Q9BYV8 373 aa15.66■□□□□ 0.1
LINC01220-201ENST00000558575 BTBD1Q9H0C5 482 aa15.66■□□□□ 0.1
LINC01220-201ENST00000558575 SUV39H2Q9H5I1 410 aa15.66■□□□□ 0.1
LINC01220-201ENST00000558575 C6orf106Q9H6K1 298 aaPredicted RBP15.66■□□□□ 0.1
LINC01220-201ENST00000558575 SGK2Q9HBY8 427 aa15.66■□□□□ 0.1
LINC01220-201ENST00000558575 TOR4AQ9NXH8 423 aa15.66■□□□□ 0.1
LINC01220-201ENST00000558575 FZD4Q9ULV1 537 aa15.66■□□□□ 0.1
LINC01220-201ENST00000558575 NCKAP1Q9Y2A7 1128 aa15.66■□□□□ 0.1
LINC01220-201ENST00000558575 JRKLQ9Y4A0 524 aa15.66■□□□□ 0.1
LINC01220-201ENST00000558575 TRABD2BA6NFA1 517 aa15.65■□□□□ 0.1
LINC01220-201ENST00000558575 TRAFD1O14545 582 aaPredicted RBP15.65■□□□□ 0.1
LINC01220-201ENST00000558575 FANCGO15287 622 aa15.65■□□□□ 0.1
LINC01220-201ENST00000558575 SPINT1O43278 529 aa15.65■□□□□ 0.1
LINC01220-201ENST00000558575 ATP1A1P05023 1023 aaKnown RBP15.65■□□□□ 0.1
LINC01220-201ENST00000558575 ITIH2P19823 946 aa15.65■□□□□ 0.1
LINC01220-201ENST00000558575 ITGB7P26010 798 aa15.65■□□□□ 0.1
LINC01220-201ENST00000558575 PTPN3P26045 913 aa15.65■□□□□ 0.1
LINC01220-201ENST00000558575 CXCR5P32302 372 aa15.65■□□□□ 0.1
LINC01220-201ENST00000558575 ABCG1P45844 678 aa15.65■□□□□ 0.1
LINC01220-201ENST00000558575 DSC2Q02487 901 aa15.65■□□□□ 0.1
LINC01220-201ENST00000558575 RAD51Q06609 339 aa15.65■□□□□ 0.1
LINC01220-201ENST00000558575 CAMK2BQ13554 666 aa15.65■□□□□ 0.1
LINC01220-201ENST00000558575 SIX1Q15475 284 aaPredicted RBP15.65■□□□□ 0.1
LINC01220-201ENST00000558575 SLC45A4Q5BKX6 768 aa15.65■□□□□ 0.1
LINC01220-201ENST00000558575 SLC36A4Q6YBV0 504 aa15.65■□□□□ 0.1
LINC01220-201ENST00000558575 ERN2Q76MJ5 926 aaKnown RBP15.65■□□□□ 0.1
LINC01220-201ENST00000558575 QKIQ96PU8 341 aaKnown RBP eCLIP15.65■□□□□ 0.1
LINC01220-201ENST00000558575 SEMA3CQ99985 751 aa15.65■□□□□ 0.1
LINC01220-201ENST00000558575 USP29Q9HBJ7 922 aa15.65■□□□□ 0.1
LINC01220-201ENST00000558575 AMACRQ9UHK6 382 aa15.65■□□□□ 0.1
LINC01220-201ENST00000558575 PCOLCE2Q9UKZ9 415 aa15.65■□□□□ 0.1
LINC01220-201ENST00000558575 TSPAN11A1L157 253 aa15.64■□□□□ 0.09
LINC01220-201ENST00000558575 GOLGA6L9A6NEM1 432 aa15.64■□□□□ 0.09
LINC01220-201ENST00000558575 METTL12A8MUP2 240 aa15.64■□□□□ 0.09
LINC01220-201ENST00000558575 HACD1B0YJ81 288 aa15.64■□□□□ 0.09
LINC01220-201ENST00000558575 PLRG1O43660 514 aaKnown RBP15.64■□□□□ 0.09
LINC01220-201ENST00000558575 KIF5CO60282 957 aa15.64■□□□□ 0.09
LINC01220-201ENST00000558575 SEMA4FO95754 770 aa15.64■□□□□ 0.09
LINC01220-201ENST00000558575 MMP2P08253 660 aa15.64■□□□□ 0.09
LINC01220-201ENST00000558575 ITPKBP27987 946 aa15.64■□□□□ 0.09
LINC01220-201ENST00000558575 RBL1P28749 1068 aa15.64■□□□□ 0.09
LINC01220-201ENST00000558575 CD68P34810 354 aaPredicted RBP15.64■□□□□ 0.09
LINC01220-201ENST00000558575 ABL2P42684 1182 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms