RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 TIMM22Q9Y584 194 aa15.56■□□□□ 0.08
AP4E1-202ENST00000558439 MATN3O15232 486 aa15.55■□□□□ 0.08
AP4E1-202ENST00000558439 SYNCRIPO60506 623 aaKnown RBP15.55■□□□□ 0.08
AP4E1-202ENST00000558439 HLA-DQB2P05538 268 aa15.55■□□□□ 0.08
AP4E1-202ENST00000558439 PTPRNQ16849 979 aa15.55■□□□□ 0.08
AP4E1-202ENST00000558439 ZBTB46Q86UZ6 589 aa15.55■□□□□ 0.08
AP4E1-202ENST00000558439 CATSPERZQ9NTU4 200 aa15.55■□□□□ 0.08
AP4E1-202ENST00000558439 ZNF711Q9Y462 761 aa15.55■□□□□ 0.08
AP4E1-202ENST00000558439 RAD54BQ9Y620 910 aa15.55■□□□□ 0.08
AP4E1-202ENST00000558439 MT-ND1P03886 318 aa15.55■□□□□ 0.08
AP4E1-202ENST00000558439 FASP25445 335 aa15.55■□□□□ 0.08
AP4E1-202ENST00000558439 SCNN1AP37088 669 aa15.55■□□□□ 0.08
AP4E1-202ENST00000558439 TUSC3Q13454 348 aa15.55■□□□□ 0.08
AP4E1-202ENST00000558439 NAPRTQ6XQN6 538 aa15.55■□□□□ 0.08
AP4E1-202ENST00000558439 CARNMT1Q8N4J0 409 aa15.55■□□□□ 0.08
AP4E1-202ENST00000558439 NTAN1Q96AB6 310 aa15.55■□□□□ 0.08
AP4E1-202ENST00000558439 HBEGFQ99075 208 aa15.55■□□□□ 0.08
AP4E1-202ENST00000558439 SLC39A3Q9BRY0 314 aa15.55■□□□□ 0.08
AP4E1-202ENST00000558439 GMIPQ9P107 970 aa15.55■□□□□ 0.08
AP4E1-202ENST00000558439 FAM149AA5PLN7 773 aa15.55■□□□□ 0.08
AP4E1-202ENST00000558439 PRKCGP05129 697 aa15.55■□□□□ 0.08
AP4E1-202ENST00000558439 RAB27AP51159 221 aa15.55■□□□□ 0.08
AP4E1-202ENST00000558439 METTL6Q8TCB7 284 aa15.55■□□□□ 0.08
AP4E1-202ENST00000558439 MAPK15Q8TD08 544 aa15.55■□□□□ 0.08
AP4E1-202ENST00000558439 HMCESQ96FZ2 354 aa15.55■□□□□ 0.08
AP4E1-202ENST00000558439 RMND5BQ96G75 393 aaPredicted RBP15.55■□□□□ 0.08
AP4E1-202ENST00000558439 RNF145Q96MT1 663 aa15.55■□□□□ 0.08
AP4E1-202ENST00000558439 HGH1Q9BTY7 390 aa15.55■□□□□ 0.08
AP4E1-202ENST00000558439 PRDM5Q9NQX1 630 aaPredicted RBP15.55■□□□□ 0.08
AP4E1-202ENST00000558439 PCDHB7Q9Y5E2 793 aa15.55■□□□□ 0.08
AP4E1-202ENST00000558439 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.54■□□□□ 0.08
AP4E1-202ENST00000558439 ZBTB14O43829 449 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 NRP2O60462 931 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 AFF1P51825 1210 aaKnown RBP15.54■□□□□ 0.08
AP4E1-202ENST00000558439 BRMS1LQ5PSV4 323 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 C16orf87Q6PH81 154 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 SATL1Q86VE3 508 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 DDI1Q8WTU0 396 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 ARNTL2Q8WYA1 636 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 DLG3Q92796 817 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 CASP10Q92851 521 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 KCTD14Q9BQ13 255 aaPredicted RBP15.54■□□□□ 0.08
AP4E1-202ENST00000558439 SENP6Q9GZR1 1112 aaPredicted RBP15.54■□□□□ 0.08
AP4E1-202ENST00000558439 CASS4Q9NQ75 786 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 UBR3Q6ZT12 1888 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 PRRG1O14668 218 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 ALBP02768 609 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 KCNE1P15382 129 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 SQLEQ14534 574 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 CTC1Q2NKJ3 1217 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 VPS26BQ4G0F5 336 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 PAOXQ6QHF9 649 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 EPGNQ6UW88 154 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 LPCAT2Q7L5N7 544 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 MFN1Q8IWA4 741 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 PGAM4Q8N0Y7 254 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 MLPHQ9BV36 600 aaPredicted RBP15.54■□□□□ 0.08
AP4E1-202ENST00000558439 VPS28Q9UK41 221 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 LTBP3Q9NS15 1303 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 SYCE1LA8MT33 242 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 SNNO75324 88 aaPredicted RBP15.54■□□□□ 0.08
AP4E1-202ENST00000558439 F2P00734 622 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 ALDH2P05091 517 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 HDCP19113 662 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 MAP4P27816 1152 aaKnown RBP15.54■□□□□ 0.08
AP4E1-202ENST00000558439 CDK18Q07002 472 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 ATP6AP1LQ52LC2 224 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 KHSRPQ92945 711 aaKnown RBP eCLIP15.54■□□□□ 0.08
AP4E1-202ENST00000558439 DNAJA2O60884 412 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 GPR32O75388 356 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 SLC10A7Q0GE19 358 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 VEPH1Q14D04 833 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 CDYL2Q8N8U2 506 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 OR9I1Q8NGQ6 314 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 RAET1EQ8TD07 263 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 TMEM209Q96SK2 561 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 WWOXQ9NZC7 414 aa15.54■□□□□ 0.08
AP4E1-202ENST00000558439 SBF2Q86WG5 1849 aa15.53■□□□□ 0.08
AP4E1-202ENST00000558439 CD3EAPO15446 510 aaKnown RBP15.53■□□□□ 0.08
AP4E1-202ENST00000558439 SIX3O95343 332 aaPredicted RBP15.53■□□□□ 0.08
AP4E1-202ENST00000558439 LBPP18428 481 aa15.53■□□□□ 0.08
AP4E1-202ENST00000558439 RPL5P46777 297 aaKnown RBP15.53■□□□□ 0.08
AP4E1-202ENST00000558439 NIPAL4Q0D2K0 466 aa15.53■□□□□ 0.08
AP4E1-202ENST00000558439 TAF10Q12962 218 aa15.53■□□□□ 0.08
AP4E1-202ENST00000558439 MARCH8Q5T0T0 291 aa15.53■□□□□ 0.08
AP4E1-202ENST00000558439 ZNF534Q76KX8 674 aa15.53■□□□□ 0.08
AP4E1-202ENST00000558439 MON1AQ86VX9 555 aa15.53■□□□□ 0.08
AP4E1-202ENST00000558439 IFNLR1Q8IU57 520 aaPredicted RBP15.53■□□□□ 0.08
AP4E1-202ENST00000558439 KCTD13Q8WZ19 329 aa15.53■□□□□ 0.08
AP4E1-202ENST00000558439 CYP2S1Q96SQ9 504 aa15.53■□□□□ 0.08
AP4E1-202ENST00000558439 ACBD6Q9BR61 282 aa15.53■□□□□ 0.08
AP4E1-202ENST00000558439 CRLS1Q9UJA2 301 aa15.53■□□□□ 0.08
AP4E1-202ENST00000558439 COPG1Q9Y678 874 aaKnown RBP15.53■□□□□ 0.08
AP4E1-202ENST00000558439 DCLK1O15075 740 aa15.53■□□□□ 0.08
AP4E1-202ENST00000558439 CLOCKO15516 846 aa15.53■□□□□ 0.08
AP4E1-202ENST00000558439 HNRNPCP07910 306 aaKnown RBP eCLIP15.53■□□□□ 0.08
AP4E1-202ENST00000558439 PTPRCAPQ14761 206 aa15.53■□□□□ 0.08
AP4E1-202ENST00000558439 AASDHQ4L235 1098 aaPredicted RBP15.53■□□□□ 0.08
AP4E1-202ENST00000558439 RNF180Q86T96 592 aa15.53■□□□□ 0.08
AP4E1-202ENST00000558439 HERC6Q8IVU3 1022 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms