RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 CREBRFQ8IUR6 639 aa17.97■□□□□ 0.47
TSPAN3-204ENST00000558394 C9orf43Q8TAL5 461 aaPredicted RBP17.97■□□□□ 0.47
TSPAN3-204ENST00000558394 KIAA1524Q8TCG1 905 aa17.97■□□□□ 0.47
TSPAN3-204ENST00000558394 C18orf8Q96DM3 657 aa17.97■□□□□ 0.47
TSPAN3-204ENST00000558394 PDXPQ96GD0 296 aa17.97■□□□□ 0.47
TSPAN3-204ENST00000558394 TTYH3Q9C0H2 523 aa17.97■□□□□ 0.47
TSPAN3-204ENST00000558394 MAGEH1Q9H213 219 aa17.97■□□□□ 0.47
TSPAN3-204ENST00000558394 RDH14Q9HBH5 336 aa17.97■□□□□ 0.47
TSPAN3-204ENST00000558394 GDPD2Q9HCC8 539 aa17.97■□□□□ 0.47
TSPAN3-204ENST00000558394 ZNF71Q9NQZ8 489 aaPredicted RBP17.97■□□□□ 0.47
TSPAN3-204ENST00000558394 DKK3Q9UBP4 350 aa17.97■□□□□ 0.47
TSPAN3-204ENST00000558394 APEX2Q9UBZ4 518 aa17.97■□□□□ 0.47
TSPAN3-204ENST00000558394 CTNND2Q9UQB3 1225 aa17.97■□□□□ 0.47
TSPAN3-204ENST00000558394 DGKBQ9Y6T7 804 aa17.97■□□□□ 0.47
TSPAN3-204ENST00000558394 BLACEA4D250 179 aa17.96■□□□□ 0.47
TSPAN3-204ENST00000558394 ZSCAN5CA6NGD5 496 aaPredicted RBP17.96■□□□□ 0.47
TSPAN3-204ENST00000558394 ZNF891A8MT65 544 aaPredicted RBP17.96■□□□□ 0.47
TSPAN3-204ENST00000558394 CACNB4O00305 520 aaPredicted RBP17.96■□□□□ 0.47
TSPAN3-204ENST00000558394 HGSO14964 777 aaPredicted RBP17.96■□□□□ 0.47
TSPAN3-204ENST00000558394 BUB1O43683 1085 aa17.96■□□□□ 0.47
TSPAN3-204ENST00000558394 RAMP2O60895 175 aa17.96■□□□□ 0.47
TSPAN3-204ENST00000558394 FGFR1OPO95684 399 aaKnown RBP17.96■□□□□ 0.47
TSPAN3-204ENST00000558394 CCL4P13236 92 aa17.96■□□□□ 0.47
TSPAN3-204ENST00000558394 LIFP15018 202 aa17.96■□□□□ 0.47
TSPAN3-204ENST00000558394 CD44P16070 742 aaKnown RBP17.96■□□□□ 0.47
TSPAN3-204ENST00000558394 KELP23276 732 aa17.96■□□□□ 0.47
TSPAN3-204ENST00000558394 SCNN1AP37088 669 aa17.96■□□□□ 0.47
TSPAN3-204ENST00000558394 MARSP56192 900 aaKnown RBP17.96■□□□□ 0.47
TSPAN3-204ENST00000558394 MTM1Q13496 603 aa17.96■□□□□ 0.47
TSPAN3-204ENST00000558394 HLTFQ14527 1009 aaKnown RBP eCLIP17.96■□□□□ 0.47
TSPAN3-204ENST00000558394 EFHC2Q5JST6 749 aa17.96■□□□□ 0.47
TSPAN3-204ENST00000558394 CFAP58Q5T655 872 aa17.96■□□□□ 0.47
TSPAN3-204ENST00000558394 ERAP2Q6P179 960 aa17.96■□□□□ 0.47
TSPAN3-204ENST00000558394 TMPRSS9Q7Z410 1059 aa17.96■□□□□ 0.47
TSPAN3-204ENST00000558394 CACNA2D3Q8IZS8 1091 aa17.96■□□□□ 0.47
TSPAN3-204ENST00000558394 TMEM35BQ8NCS4 154 aa17.96■□□□□ 0.47
TSPAN3-204ENST00000558394 OR56A4Q8NGH8 313 aa17.96■□□□□ 0.47
TSPAN3-204ENST00000558394 SHC3Q92529 594 aa17.96■□□□□ 0.47
TSPAN3-204ENST00000558394 HMCESQ96FZ2 354 aa17.96■□□□□ 0.47
TSPAN3-204ENST00000558394 CDH19Q9H159 772 aa17.96■□□□□ 0.47
TSPAN3-204ENST00000558394 RETREG1Q9H6L5 497 aa17.96■□□□□ 0.47
TSPAN3-204ENST00000558394 PLCB1Q9NQ66 1216 aa17.96■□□□□ 0.47
TSPAN3-204ENST00000558394 MOSPD1Q9UJG1 213 aa17.96■□□□□ 0.47
TSPAN3-204ENST00000558394 CLEC18AA5D8T8 446 aa17.95■□□□□ 0.46
TSPAN3-204ENST00000558394 RHPN2P1A8MT19 583 aa17.95■□□□□ 0.46
TSPAN3-204ENST00000558394 CAPN5O15484 640 aaPredicted RBP17.95■□□□□ 0.46
TSPAN3-204ENST00000558394 TMCC1O94876 653 aa17.95■□□□□ 0.46
TSPAN3-204ENST00000558394 ALDH4A1P30038 563 aa17.95■□□□□ 0.46
TSPAN3-204ENST00000558394 STX17P56962 302 aa17.95■□□□□ 0.46
TSPAN3-204ENST00000558394 RHOAP61586 193 aa17.95■□□□□ 0.46
TSPAN3-204ENST00000558394 SPECC1LQ69YQ0 1117 aa17.95■□□□□ 0.46
TSPAN3-204ENST00000558394 FOXR2Q6PJQ5 311 aa17.95■□□□□ 0.46
TSPAN3-204ENST00000558394 CLEC18BQ6UXF7 455 aa17.95■□□□□ 0.46
TSPAN3-204ENST00000558394 GBP6Q6ZN66 633 aa17.95■□□□□ 0.46
TSPAN3-204ENST00000558394 ATCAYQ86WG3 371 aa17.95■□□□□ 0.46
TSPAN3-204ENST00000558394 CLEC18CQ8NCF0 446 aa17.95■□□□□ 0.46
TSPAN3-204ENST00000558394 MSANTD4Q8NCY6 345 aa17.95■□□□□ 0.46
TSPAN3-204ENST00000558394 RCBTB1Q8NDN9 531 aa17.95■□□□□ 0.46
TSPAN3-204ENST00000558394 CFAP57Q96MR6 1250 aa17.95■□□□□ 0.46
TSPAN3-204ENST00000558394 PSMG3-AS1Q96PY0 264 aa17.95■□□□□ 0.46
TSPAN3-204ENST00000558394 OR12D3Q9UGF7 316 aa17.95■□□□□ 0.46
TSPAN3-204ENST00000558394 ANKRD36A6QL64 1941 aa17.95■□□□□ 0.46
TSPAN3-204ENST00000558394 ARHGEF17Q96PE2 2063 aaPredicted RBP17.95■□□□□ 0.46
TSPAN3-204ENST00000558394 KDELR3O43731 214 aa17.94■□□□□ 0.46
TSPAN3-204ENST00000558394 RHOQP17081 205 aa17.94■□□□□ 0.46
TSPAN3-204ENST00000558394 SLC9A1P19634 815 aa17.94■□□□□ 0.46
TSPAN3-204ENST00000558394 UGT1A3P35503 534 aa17.94■□□□□ 0.46
TSPAN3-204ENST00000558394 B4GALNT1Q00973 533 aa17.94■□□□□ 0.46
TSPAN3-204ENST00000558394 CLPPQ16740 277 aaPredicted RBP17.94■□□□□ 0.46
TSPAN3-204ENST00000558394 SLC47A2Q86VL8 602 aa17.94■□□□□ 0.46
TSPAN3-204ENST00000558394 CASKIN2Q8WXE0 1202 aa17.94■□□□□ 0.46
TSPAN3-204ENST00000558394 OR1E3Q8WZA6 343 aa17.94■□□□□ 0.46
TSPAN3-204ENST00000558394 KIAA1143Q96AT1 154 aaPredicted RBP17.94■□□□□ 0.46
TSPAN3-204ENST00000558394 NDFIP2Q9NV92 336 aa17.94■□□□□ 0.46
TSPAN3-204ENST00000558394 TMEM248Q9NWD8 314 aa17.94■□□□□ 0.46
TSPAN3-204ENST00000558394 MAN1B1Q9UKM7 699 aa17.94■□□□□ 0.46
TSPAN3-204ENST00000558394 DAAM1Q9Y4D1 1078 aa17.94■□□□□ 0.46
TSPAN3-204ENST00000558394 PCDHGA3Q9Y5H0 932 aa17.94■□□□□ 0.46
TSPAN3-204ENST00000558394 GOLGA8SH3BPF8 625 aa17.93■□□□□ 0.46
TSPAN3-204ENST00000558394 FGF3P11487 239 aaPredicted RBP17.93■□□□□ 0.46
TSPAN3-204ENST00000558394 CSTF2P33240 577 aaKnown RBP eCLIP17.93■□□□□ 0.46
TSPAN3-204ENST00000558394 FLT3P36888 993 aa17.93■□□□□ 0.46
TSPAN3-204ENST00000558394 OR1D5P58170 312 aa17.93■□□□□ 0.46
TSPAN3-204ENST00000558394 BPIFB4P59827 614 aa17.93■□□□□ 0.46
TSPAN3-204ENST00000558394 EXOC3L4Q17RC7 722 aa17.93■□□□□ 0.46
TSPAN3-204ENST00000558394 TSR1Q2NL82 804 aaKnown RBP17.93■□□□□ 0.46
TSPAN3-204ENST00000558394 NYAP1Q6ZVC0 841 aa17.93■□□□□ 0.46
TSPAN3-204ENST00000558394 AGBL5Q8NDL9 886 aa17.93■□□□□ 0.46
TSPAN3-204ENST00000558394 HCAR2Q8TDS4 363 aa17.93■□□□□ 0.46
TSPAN3-204ENST00000558394 CCDC74BQ96LY2 380 aa17.93■□□□□ 0.46
TSPAN3-204ENST00000558394 ASPSCR1Q9BZE9 553 aa17.93■□□□□ 0.46
TSPAN3-204ENST00000558394 ZMYND15Q9H091 742 aa17.93■□□□□ 0.46
TSPAN3-204ENST00000558394 TMEM168Q9H0V1 697 aa17.93■□□□□ 0.46
TSPAN3-204ENST00000558394 CYP4F12Q9HCS2 524 aa17.93■□□□□ 0.46
TSPAN3-204ENST00000558394 PCDH12Q9NPG4 1184 aa17.93■□□□□ 0.46
TSPAN3-204ENST00000558394 MRPL40Q9NQ50 206 aaKnown RBP17.93■□□□□ 0.46
TSPAN3-204ENST00000558394 ZDHHC9Q9Y397 364 aa17.93■□□□□ 0.46
TSPAN3-204ENST00000558394 MFHAS1Q9Y4C4 1052 aa17.93■□□□□ 0.46
TSPAN3-204ENST00000558394 USP9YO00507 2555 aaPredicted RBP17.92■□□□□ 0.46
TSPAN3-204ENST00000558394 TNFRSF10CO14798 259 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms