RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 EARS2Q5JPH6 523 aaKnown RBP1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 DCST1Q5T197 706 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 OTUD1Q5VV17 481 aaPredicted RBP1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 C1QL3Q5VWW1 255 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 ZNF449Q6P9G9 518 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 DHRS13Q6UX07 377 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 KYAT3Q6YP21 454 aaKnown RBP1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 TRAPPC11Q7Z392 1133 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 EXOC3L1Q86VI1 746 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 CHD1LQ86WJ1 897 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 HEATR4Q86WZ0 1026 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 METTL23Q86XA0 190 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 SFTPA2Q8IWL1 248 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 ZCCHC9Q8N567 271 aaKnown RBP1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 ANKRD52Q8NB46 1076 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 KCNH5Q8NCM2 988 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 LINS1Q8NG48 757 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 MAFAQ8NHW3 353 aaPredicted RBP1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 MYCBPAPQ8TBZ2 947 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 CACTINQ8WUQ7 758 aaKnown RBP1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 CCDC47Q96A33 483 aaKnown RBP1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 LRRC59Q96AG4 307 aaKnown RBP1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 TRMT61AQ96FX7 289 aaKnown RBP1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 FERMT1Q9BQL6 677 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 DNAI2Q9GZS0 605 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 CDT1Q9H211 546 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 SEMA4BQ9NPR2 832 aaPredicted RBP1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 VPS18Q9P253 973 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 SLCO3A1Q9UIG8 710 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 DBNLQ9UJU6 430 aaKnown RBP1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 PLA2G2DQ9UNK4 145 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 ZNF541Q9H0D2 1346 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 A0A0G2JLL6 359 aaPredicted RBP1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 hCG_1807616A0A1W2PRN6 198 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 NPIPB13A6NJU9 1138 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 NPIPB5A8MRT5 1133 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 NPIPB4C9JG80 1138 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 ADM5C9JUS6 153 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 CLIC1O00299 241 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 SPDEFO95238 335 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 URODP06132 367 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 IL6RP08887 468 aaPredicted RBP1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 LINGO3P0C6S8 592 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 ZNF20P17024 532 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 ENGP17813 658 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 ERCC2P18074 760 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 HLA-DPA1P20036 260 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 UBA1P22314 1058 aaKnown RBP1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 CXCR5P32302 372 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 HOXD13P35453 343 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 EIF2DP41214 584 aaKnown RBP1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 MTHFRP42898 656 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 ALDH7A1P49419 539 aaKnown RBP1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 SLC37A1P57057 533 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 EFEMP1Q12805 493 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 ACAP1Q15027 740 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 RASA2Q15283 850 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 FAM205BPQ63HN1 556 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 JADE1Q6IE81 842 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 RANBP10Q6VN20 620 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 GPAT4Q86UL3 456 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 WDR63Q8IWG1 891 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 CNTROBQ8N137 903 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 C17orf53Q8N3J3 647 aaPredicted RBP1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 MINDY1Q8N5J2 469 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 CADM4Q8NFZ8 388 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 C9orf43Q8TAL5 461 aaPredicted RBP1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 ZNF398Q8TD17 642 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 CREB3L4Q8TEY5 395 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 RUFY2Q8WXA3 655 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 ARHGEF26Q96DR7 871 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 ADAD1Q96M93 576 aaKnown RBP1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 KLHL15Q96M94 604 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 MROH8Q9H579 483 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 BPIFA1Q9NP55 256 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 MBNL1Q9NR56 388 aaKnown RBP1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 ARHGEF38Q9NXL2 777 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 CEP72Q9P209 647 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 PACSIN3Q9UKS6 424 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 SNX7Q9UNH6 387 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 MST1RQ04912 1400 aa1.4□□□□□ -2.19
CTDSPL2-202ENST00000558373 COL4A3Q01955 1670 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 COL4A2P08572 1712 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 FAM237BA0A1B0GVD1 139 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 MS4A18H0YCH9 400 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 MASP2O00187 686 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 SH2B2O14492 632 aaPredicted RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 ZNF185O15231 689 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 EXOC3O60645 756 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 MITFO75030 526 aaPredicted RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 BEST1O76090 585 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 NFATC1O95644 943 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 EBLN1P0CF75 366 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 APEHP13798 732 aaKnown RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 TNFRSF1AP19438 455 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 HOXD3P31249 432 aaPredicted RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 NRIP1P48552 1158 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 AGTR2P50052 363 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 RBP5P82980 135 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 B4GALNT1Q00973 533 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms