RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 FAM182AQ5T1J6 154 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 ARMC12Q5T9G4 340 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 KCNT2Q6UVM3 1135 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 METTL7BQ6UX53 244 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 C12orf29Q8N999 325 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 LSM14AQ8ND56 463 aaKnown RBP14.03□□□□□ -0.16
SPG11-210ENST00000558319 NEK7Q8TDX7 302 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 MORF4L1Q9UBU8 362 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 C3orf18Q9UK00 162 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 ISM1B1AKI9 464 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 UQCRBP14927 111 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 AUHQ13825 339 aaKnown RBP14.03□□□□□ -0.16
SPG11-210ENST00000558319 ATP13A4Q4VNC1 1196 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 C12orf56Q8IXR9 622 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 KIAA0319LQ8IZA0 1049 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 ALLCQ8N6M5 410 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 ING5Q8WYH8 240 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 EZH1Q92800 747 aaPredicted RBP14.03□□□□□ -0.16
SPG11-210ENST00000558319 C15orf38-AP3S2A0A0A6YYH1 394 aa14.02□□□□□ -0.16
SPG11-210ENST00000558319 A0A1W2PQ67 120 aa14.02□□□□□ -0.16
SPG11-210ENST00000558319 HOXA2O43364 376 aa14.02□□□□□ -0.16
SPG11-210ENST00000558319 EPHA3P29320 983 aa14.02□□□□□ -0.16
SPG11-210ENST00000558319 PIK3CGP48736 1102 aa14.02□□□□□ -0.16
SPG11-210ENST00000558319 COPZ1P61923 177 aa14.02□□□□□ -0.16
SPG11-210ENST00000558319 PTCHD4Q6ZW05 846 aa14.02□□□□□ -0.16
SPG11-210ENST00000558319 ANKS1BQ7Z6G8 1248 aa14.02□□□□□ -0.16
SPG11-210ENST00000558319 ARPINQ7Z6K5 226 aa14.02□□□□□ -0.16
SPG11-210ENST00000558319 FAM129CQ86XR2 697 aa14.02□□□□□ -0.16
SPG11-210ENST00000558319 KIAA0895Q8NCT3 520 aa14.02□□□□□ -0.16
SPG11-210ENST00000558319 DGCR14Q96DF8 476 aaKnown RBP14.02□□□□□ -0.16
SPG11-210ENST00000558319 ASB8Q9H765 288 aa14.02□□□□□ -0.16
SPG11-210ENST00000558319 SAMHD1Q9Y3Z3 626 aaKnown RBP14.02□□□□□ -0.16
SPG11-210ENST00000558319 OR10H1Q9Y4A9 318 aa14.02□□□□□ -0.16
SPG11-210ENST00000558319 ATP6AP2A0A1C7CYW4 349 aa14.02□□□□□ -0.16
SPG11-210ENST00000558319 A0A1W2PQ72 361 aa14.02□□□□□ -0.16
SPG11-210ENST00000558319 ATP6AP2O75787 350 aa14.02□□□□□ -0.16
SPG11-210ENST00000558319 PTPN3P26045 913 aa14.02□□□□□ -0.16
SPG11-210ENST00000558319 SWI5Q1ZZU3 235 aa14.02□□□□□ -0.16
SPG11-210ENST00000558319 FIGNQ5HY92 759 aa14.02□□□□□ -0.16
SPG11-210ENST00000558319 TNS4Q8IZW8 715 aa14.02□□□□□ -0.16
SPG11-210ENST00000558319 OR52L1Q8NGH7 329 aa14.02□□□□□ -0.16
SPG11-210ENST00000558319 RASSF1Q9NS23 344 aa14.02□□□□□ -0.16
SPG11-210ENST00000558319 ITGA11Q9UKX5 1188 aa14.02□□□□□ -0.16
SPG11-210ENST00000558319 ABHD14A-ACY1A0A1B0GW23 586 aa14.02□□□□□ -0.17
SPG11-210ENST00000558319 PDE2AO00408 941 aaPredicted RBP14.02□□□□□ -0.17
SPG11-210ENST00000558319 ERAL1O75616 437 aaKnown RBP14.02□□□□□ -0.17
SPG11-210ENST00000558319 VGLL4Q14135 290 aa14.02□□□□□ -0.17
SPG11-210ENST00000558319 CEP68Q76N32 757 aa14.02□□□□□ -0.17
SPG11-210ENST00000558319 ABRAQ8N0Z2 381 aa14.02□□□□□ -0.17
SPG11-210ENST00000558319 CLHC1Q8NHS4 586 aa14.02□□□□□ -0.17
SPG11-210ENST00000558319 PTCD3Q96EY7 689 aaKnown RBP14.02□□□□□ -0.17
SPG11-210ENST00000558319 TNFSF13BQ9Y275 285 aa14.02□□□□□ -0.17
SPG11-210ENST00000558319 NEDD8-MDP1E9PL57 170 aa14.02□□□□□ -0.17
SPG11-210ENST00000558319 CCDC166P0CW27 439 aa14.02□□□□□ -0.17
SPG11-210ENST00000558319 SEMA5AQ13591 1074 aa14.02□□□□□ -0.17
SPG11-210ENST00000558319 SERPINA13PQ6UXR4 307 aa14.02□□□□□ -0.17
SPG11-210ENST00000558319 FAM43BQ6ZT52 329 aaPredicted RBP14.02□□□□□ -0.17
SPG11-210ENST00000558319 SLC34A3Q8N130 599 aa14.02□□□□□ -0.17
SPG11-210ENST00000558319 TRPV3Q8NET8 790 aa14.02□□□□□ -0.17
SPG11-210ENST00000558319 PCDHA11Q9Y5I1 949 aa14.02□□□□□ -0.17
SPG11-210ENST00000558319 AP2A2O94973 939 aa14.02□□□□□ -0.17
SPG11-210ENST00000558319 PDCD2LQ9BRP1 358 aa14.02□□□□□ -0.17
SPG11-210ENST00000558319 ETNK2Q9NVF9 386 aa14.02□□□□□ -0.17
SPG11-210ENST00000558319 HPSEQ9Y251 543 aa14.02□□□□□ -0.17
SPG11-210ENST00000558319 DHRS7Q9Y394 339 aa14.02□□□□□ -0.17
SPG11-210ENST00000558319 RBM7Q9Y580 266 aaKnown RBP14.02□□□□□ -0.17
SPG11-210ENST00000558319 SPATA31A5Q5VU36 1347 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 SPATA31A7Q8IWB4 1347 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 DHRS12A0PJE2 317 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 E7ENX8 843 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 OR10H3O60404 316 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 HIST1H2ABP04908 130 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 ALAS2P22557 587 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 MIPP30301 263 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 CDK7P50613 346 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 TYSND1Q2T9J0 566 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 ZNF549Q6P9A3 640 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 FAM183BPQ6ZVS7 135 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 HIST3H2AQ7L7L0 130 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 CXXC5Q7LFL8 322 aaKnown RBP14.01□□□□□ -0.17
SPG11-210ENST00000558319 YTHDF3Q7Z739 585 aaKnown RBP14.01□□□□□ -0.17
SPG11-210ENST00000558319 LRRC20Q8TCA0 184 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 PHF10Q8WUB8 498 aaKnown RBP14.01□□□□□ -0.17
SPG11-210ENST00000558319 SELENOMQ8WWX9 145 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 HIST1H2ACQ93077 130 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 CXorf40BQ96DE9 158 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 MLXQ9UH92 298 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 ABCC3O15438 1527 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 CAPN8A6NHC0 703 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 ARHGEF33A8MVX0 844 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 F9P00740 461 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 VIL1P09327 827 aaKnown RBP14.01□□□□□ -0.17
SPG11-210ENST00000558319 ZNF7P17097 686 aaPredicted RBP14.01□□□□□ -0.17
SPG11-210ENST00000558319 TROAPQ12815 778 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 TARBP2Q15633 366 aaKnown RBP14.01□□□□□ -0.17
SPG11-210ENST00000558319 HYIQ5T013 277 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 FAM151BQ6UXP7 276 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 MCOLN3Q8TDD5 553 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 TCF12Q99081 682 aa14.01□□□□□ -0.17
SPG11-210ENST00000558319 ARL8BQ9NVJ2 186 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms