RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 C4orf47A7E2U8 309 aa6.34□□□□□ -1.39
RTF1-204ENST00000558117 TMEM232C9JQI7 657 aa6.34□□□□□ -1.39
RTF1-204ENST00000558117 MPHOSPH10O00566 681 aaKnown RBP6.34□□□□□ -1.39
RTF1-204ENST00000558117 HNRNPDLO14979 420 aaKnown RBP6.34□□□□□ -1.39
RTF1-204ENST00000558117 PRAMEF2O60811 474 aa6.34□□□□□ -1.39
RTF1-204ENST00000558117 TUBB4AP04350 444 aa6.34□□□□□ -1.39
RTF1-204ENST00000558117 HTR3AP46098 478 aa6.34□□□□□ -1.39
RTF1-204ENST00000558117 RPS9P46781 194 aaKnown RBP6.34□□□□□ -1.39
RTF1-204ENST00000558117 RFX5P48382 616 aaPredicted RBP6.34□□□□□ -1.39
RTF1-204ENST00000558117 TXNL4AP83876 142 aaKnown RBP6.34□□□□□ -1.39
RTF1-204ENST00000558117 CFHR1Q03591 330 aa6.34□□□□□ -1.39
RTF1-204ENST00000558117 AWAT1Q58HT5 328 aa6.34□□□□□ -1.39
RTF1-204ENST00000558117 MIS18BP1Q6P0N0 1132 aa6.34□□□□□ -1.39
RTF1-204ENST00000558117 TMEM65Q6PI78 240 aa6.34□□□□□ -1.39
RTF1-204ENST00000558117 TMEM179Q6ZVK1 233 aa6.34□□□□□ -1.39
RTF1-204ENST00000558117 KRT73Q86Y46 540 aa6.34□□□□□ -1.39
RTF1-204ENST00000558117 P3H2Q8IVL5 708 aa6.34□□□□□ -1.39
RTF1-204ENST00000558117 SYTL1Q8IYJ3 562 aa6.34□□□□□ -1.39
RTF1-204ENST00000558117 IPO4Q8TEX9 1081 aaKnown RBP6.34□□□□□ -1.39
RTF1-204ENST00000558117 GRAMD1AQ96CP6 724 aa6.34□□□□□ -1.39
RTF1-204ENST00000558117 SLC29A3Q9BZD2 475 aa6.34□□□□□ -1.39
RTF1-204ENST00000558117 SH2D4AQ9H788 454 aa6.34□□□□□ -1.39
RTF1-204ENST00000558117 USP29Q9HBJ7 922 aa6.34□□□□□ -1.39
RTF1-204ENST00000558117 SLC38A10Q9HBR0 1119 aa6.34□□□□□ -1.39
RTF1-204ENST00000558117 LTB4R2Q9NPC1 389 aa6.34□□□□□ -1.39
RTF1-204ENST00000558117 VPS45Q9NRW7 570 aa6.34□□□□□ -1.39
RTF1-204ENST00000558117 TM7SF3Q9NS93 570 aa6.34□□□□□ -1.39
RTF1-204ENST00000558117 HMG20BQ9P0W2 317 aa6.34□□□□□ -1.39
RTF1-204ENST00000558117 DENND4AQ7Z401 1863 aa6.34□□□□□ -1.39
RTF1-204ENST00000558117 TTC3P53804 2025 aa6.33□□□□□ -1.4
RTF1-204ENST00000558117 GREB1Q4ZG55 1949 aa6.33□□□□□ -1.4
RTF1-204ENST00000558117 MGAQ8IWI9 3026 aa6.33□□□□□ -1.4
RTF1-204ENST00000558117 HAS3O00219 553 aa6.33□□□□□ -1.4
RTF1-204ENST00000558117 PPP6CO00743 305 aa6.33□□□□□ -1.4
RTF1-204ENST00000558117 RNF8O76064 485 aa6.33□□□□□ -1.4
RTF1-204ENST00000558117 LATS1O95835 1130 aa6.33□□□□□ -1.4
RTF1-204ENST00000558117 MBPP02686 304 aaPredicted RBP6.33□□□□□ -1.4
RTF1-204ENST00000558117 GP1BBP13224 206 aa6.33□□□□□ -1.4
RTF1-204ENST00000558117 DYNLL1P63167 89 aaKnown RBP6.33□□□□□ -1.4
RTF1-204ENST00000558117 GPC5P78333 572 aa6.33□□□□□ -1.4
RTF1-204ENST00000558117 CFHR3Q02985 330 aa6.33□□□□□ -1.4
RTF1-204ENST00000558117 ICA1Q05084 483 aa6.33□□□□□ -1.4
RTF1-204ENST00000558117 BTKQ06187 659 aa6.33□□□□□ -1.4
RTF1-204ENST00000558117 DNASE1L3Q13609 305 aa6.33□□□□□ -1.4
RTF1-204ENST00000558117 KCNJ12Q14500 433 aa6.33□□□□□ -1.4
RTF1-204ENST00000558117 BRD3Q15059 726 aa6.33□□□□□ -1.4
RTF1-204ENST00000558117 TMEM196Q5HYL7 178 aa6.33□□□□□ -1.4
RTF1-204ENST00000558117 MUL1Q969V5 352 aa6.33□□□□□ -1.4
RTF1-204ENST00000558117 C5orf34Q96MH7 638 aa6.33□□□□□ -1.4
RTF1-204ENST00000558117 ARPC5LQ9BPX5 153 aa6.33□□□□□ -1.4
RTF1-204ENST00000558117 TTLL2Q9BWV7 592 aa6.33□□□□□ -1.4
RTF1-204ENST00000558117 ACAD9Q9H845 621 aa6.33□□□□□ -1.4
RTF1-204ENST00000558117 NECTIN3Q9NQS3 549 aa6.33□□□□□ -1.4
RTF1-204ENST00000558117 EPS15L1Q9UBC2 864 aa6.33□□□□□ -1.4
RTF1-204ENST00000558117 LZTS1Q9Y250 596 aa6.33□□□□□ -1.4
RTF1-204ENST00000558117 DAAM1Q9Y4D1 1078 aa6.33□□□□□ -1.4
RTF1-204ENST00000558117 DTNAQ9Y4J8 743 aa6.33□□□□□ -1.4
RTF1-204ENST00000558117 KIAA1671Q9BY89 1806 aa6.33□□□□□ -1.4
RTF1-204ENST00000558117 MIA3Q5JRA6 1907 aa6.33□□□□□ -1.4
RTF1-204ENST00000558117 LRBAP50851 2863 aa6.32□□□□□ -1.4
RTF1-204ENST00000558117 A0A087WV48 116 aa6.32□□□□□ -1.4
RTF1-204ENST00000558117 DNAJC9-AS1A6NH13 148 aa6.32□□□□□ -1.4
RTF1-204ENST00000558117 PIP5K1BO14986 540 aa6.32□□□□□ -1.4
RTF1-204ENST00000558117 ZBED4O75132 1171 aa6.32□□□□□ -1.4
RTF1-204ENST00000558117 EPN2O95208 641 aa6.32□□□□□ -1.4
RTF1-204ENST00000558117 VIPP01282 170 aa6.32□□□□□ -1.4
RTF1-204ENST00000558117 PRR35P0CG20 571 aa6.32□□□□□ -1.4
RTF1-204ENST00000558117 SETSIPP0DME0 302 aa6.32□□□□□ -1.4
RTF1-204ENST00000558117 DRD1P21728 446 aa6.32□□□□□ -1.4
RTF1-204ENST00000558117 CD72P21854 359 aa6.32□□□□□ -1.4
RTF1-204ENST00000558117 KELP23276 732 aa6.32□□□□□ -1.4
RTF1-204ENST00000558117 LMO1P25800 156 aa6.32□□□□□ -1.4
RTF1-204ENST00000558117 CSRP3P50461 194 aa6.32□□□□□ -1.4
RTF1-204ENST00000558117 OAZ1P54368 228 aa6.32□□□□□ -1.4
RTF1-204ENST00000558117 NSUN2Q08J23 767 aaKnown RBP eCLIP6.32□□□□□ -1.4
RTF1-204ENST00000558117 PPP2R5BQ15173 497 aa6.32□□□□□ -1.4
RTF1-204ENST00000558117 MTX3Q5HYI7 312 aa6.32□□□□□ -1.4
RTF1-204ENST00000558117 FAM90A2PQ658T7 463 aa6.32□□□□□ -1.4
RTF1-204ENST00000558117 NAA16Q6N069 864 aaPredicted RBP6.32□□□□□ -1.4
RTF1-204ENST00000558117 YTHDF3Q7Z739 585 aaKnown RBP6.32□□□□□ -1.4
RTF1-204ENST00000558117 NEK8Q86SG6 692 aa6.32□□□□□ -1.4
RTF1-204ENST00000558117 CNGA4Q8IV77 575 aa6.32□□□□□ -1.4
RTF1-204ENST00000558117 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.32□□□□□ -1.4
RTF1-204ENST00000558117 MRPS27Q92552 414 aaKnown RBP6.32□□□□□ -1.4
RTF1-204ENST00000558117 TMEM41AQ96HV5 264 aa6.32□□□□□ -1.4
RTF1-204ENST00000558117 EPS8L2Q9H6S3 715 aa6.32□□□□□ -1.4
RTF1-204ENST00000558117 ARFGAP3Q9NP61 516 aa6.32□□□□□ -1.4
RTF1-204ENST00000558117 ANKMY1Q9P2S6 941 aa6.32□□□□□ -1.4
RTF1-204ENST00000558117 PCDHB2Q9Y5E7 798 aa6.32□□□□□ -1.4
RTF1-204ENST00000558117 FOCADQ5VW36 1801 aa6.32□□□□□ -1.4
RTF1-204ENST00000558117 PCNX2A6NKB5 2137 aa6.31□□□□□ -1.4
RTF1-204ENST00000558117 PCNX1Q96RV3 2341 aa6.31□□□□□ -1.4
RTF1-204ENST00000558117 CLIC1O00299 241 aa6.31□□□□□ -1.4
RTF1-204ENST00000558117 ADAMTS3O15072 1205 aa6.31□□□□□ -1.4
RTF1-204ENST00000558117 DHHO43323 396 aa6.31□□□□□ -1.4
RTF1-204ENST00000558117 CYP2A6P11509 494 aaPredicted RBP6.31□□□□□ -1.4
RTF1-204ENST00000558117 AKR1B1P15121 316 aa6.31□□□□□ -1.4
RTF1-204ENST00000558117 GALNSP34059 522 aa6.31□□□□□ -1.4
RTF1-204ENST00000558117 CCDC15Q0P6D6 951 aa6.31□□□□□ -1.4
RTF1-204ENST00000558117 ZNF268Q14587 947 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms