RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 PIH1D2Q8WWB5 315 aa21.4■■□□□ 1.02
CASC4-204ENST00000557945 FAM131CQ96AQ9 280 aa21.4■■□□□ 1.02
CASC4-204ENST00000557945 LRRC45Q96CN5 670 aa21.4■■□□□ 1.02
CASC4-204ENST00000557945 RMDN1Q96DB5 314 aa21.4■■□□□ 1.02
CASC4-204ENST00000557945 FEM1CQ96JP0 617 aa21.4■■□□□ 1.02
CASC4-204ENST00000557945 MRGPRX2Q96LB1 330 aa21.4■■□□□ 1.02
CASC4-204ENST00000557945 FICDQ9BVA6 458 aa21.4■■□□□ 1.02
CASC4-204ENST00000557945 GPR174Q9BXC1 333 aa21.4■■□□□ 1.02
CASC4-204ENST00000557945 MBD1Q9UIS9 605 aaPredicted RBP21.4■■□□□ 1.02
CASC4-204ENST00000557945 ITM2BQ9Y287 266 aa21.4■■□□□ 1.02
CASC4-204ENST00000557945 TBC1D3DA0A087WVF3 549 aa21.39■■□□□ 1.02
CASC4-204ENST00000557945 TBC1D3IA0A087WXS9 549 aa21.39■■□□□ 1.02
CASC4-204ENST00000557945 TBC1D3EA0A087X179 549 aa21.39■■□□□ 1.02
CASC4-204ENST00000557945 TBC1D3KA0A087X1G2 549 aa21.39■■□□□ 1.02
CASC4-204ENST00000557945 TBC1D3FA6NER0 549 aaPredicted RBP21.39■■□□□ 1.02
CASC4-204ENST00000557945 LRRC72A6NJI9 287 aa21.39■■□□□ 1.02
CASC4-204ENST00000557945 TBC1D3LB9A6J9 549 aa21.39■■□□□ 1.02
CASC4-204ENST00000557945 PSMD3O43242 534 aa21.39■■□□□ 1.02
CASC4-204ENST00000557945 HRO43593 1189 aa21.39■■□□□ 1.02
CASC4-204ENST00000557945 PLRG1O43660 514 aaKnown RBP21.39■■□□□ 1.02
CASC4-204ENST00000557945 PCDH8O95206 1070 aa21.39■■□□□ 1.02
CASC4-204ENST00000557945 TBC1D3HP0C7X1 549 aa21.39■■□□□ 1.02
CASC4-204ENST00000557945 CTPS1P17812 591 aa21.39■■□□□ 1.02
CASC4-204ENST00000557945 BCKDHBP21953 392 aa21.39■■□□□ 1.02
CASC4-204ENST00000557945 NFKBIAP25963 317 aa21.39■■□□□ 1.02
CASC4-204ENST00000557945 SUOXP51687 545 aa21.39■■□□□ 1.02
CASC4-204ENST00000557945 TERF1P54274 439 aa21.39■■□□□ 1.02
CASC4-204ENST00000557945 TAS2R38P59533 333 aa21.39■■□□□ 1.02
CASC4-204ENST00000557945 RPL26P61254 145 aaKnown RBP21.39■■□□□ 1.02
CASC4-204ENST00000557945 SEMG2Q02383 582 aa21.39■■□□□ 1.02
CASC4-204ENST00000557945 SPARCL1Q14515 664 aa21.39■■□□□ 1.02
CASC4-204ENST00000557945 TBC1D3GQ6DHY5 549 aa21.39■■□□□ 1.02
CASC4-204ENST00000557945 TBC1D3CQ6IPX1 549 aa21.39■■□□□ 1.02
CASC4-204ENST00000557945 CEP68Q76N32 757 aa21.39■■□□□ 1.02
CASC4-204ENST00000557945 TBC1D3Q8IZP1 549 aaPredicted RBP21.39■■□□□ 1.02
CASC4-204ENST00000557945 SLC25A41Q8N5S1 370 aa21.39■■□□□ 1.02
CASC4-204ENST00000557945 ZBTB44Q8NCP5 570 aa21.39■■□□□ 1.02
CASC4-204ENST00000557945 MNS1Q8NEH6 495 aa21.39■■□□□ 1.02
CASC4-204ENST00000557945 RPL26L1Q9UNX3 145 aaKnown RBP21.39■■□□□ 1.02
CASC4-204ENST00000557945 FADS3Q9Y5Q0 445 aa21.39■■□□□ 1.02
CASC4-204ENST00000557945 NDST3O95803 873 aa21.38■■□□□ 1.01
CASC4-204ENST00000557945 AGTP01019 485 aa21.38■■□□□ 1.01
CASC4-204ENST00000557945 CNR2P34972 360 aa21.38■■□□□ 1.01
CASC4-204ENST00000557945 PTGIRP43119 386 aa21.38■■□□□ 1.01
CASC4-204ENST00000557945 RPL6Q02878 288 aaKnown RBP21.38■■□□□ 1.01
CASC4-204ENST00000557945 ELP6Q0PNE2 266 aa21.38■■□□□ 1.01
CASC4-204ENST00000557945 TCF15Q12870 199 aa21.38■■□□□ 1.01
CASC4-204ENST00000557945 USP45Q70EL2 814 aa21.38■■□□□ 1.01
CASC4-204ENST00000557945 DEFB119Q8N690 84 aa21.38■■□□□ 1.01
CASC4-204ENST00000557945 PDCD7Q8N8D1 485 aaKnown RBP21.38■■□□□ 1.01
CASC4-204ENST00000557945 OR2T34Q8NGX1 318 aa21.38■■□□□ 1.01
CASC4-204ENST00000557945 SPOCK2Q92563 424 aa21.38■■□□□ 1.01
CASC4-204ENST00000557945 SLCO2A1Q92959 643 aa21.38■■□□□ 1.01
CASC4-204ENST00000557945 TRIB3Q96RU7 358 aa21.38■■□□□ 1.01
CASC4-204ENST00000557945 APOL2Q9BQE5 337 aa21.38■■□□□ 1.01
CASC4-204ENST00000557945 ASIC3Q9UHC3 531 aa21.38■■□□□ 1.01
CASC4-204ENST00000557945 NEU2Q9Y3R4 380 aa21.38■■□□□ 1.01
CASC4-204ENST00000557945 R4GN57 208 aa21.38■■□□□ 1.01
CASC4-204ENST00000557945 NUMA1Q14980 2115 aa21.38■■□□□ 1.01
CASC4-204ENST00000557945 LOC285095A0A1B0GVY8 99 aa21.37■■□□□ 1.01
CASC4-204ENST00000557945 A8MX80 341 aa21.37■■□□□ 1.01
CASC4-204ENST00000557945 RIOK3O14730 519 aaKnown RBP21.37■■□□□ 1.01
CASC4-204ENST00000557945 AREL1O15033 823 aa21.37■■□□□ 1.01
CASC4-204ENST00000557945 TTI1O43156 1089 aa21.37■■□□□ 1.01
CASC4-204ENST00000557945 AP1G1O43747 822 aa21.37■■□□□ 1.01
CASC4-204ENST00000557945 ALPIP09923 528 aa21.37■■□□□ 1.01
CASC4-204ENST00000557945 CHRNA4P43681 627 aa21.37■■□□□ 1.01
CASC4-204ENST00000557945 GRIA4P48058 902 aa21.37■■□□□ 1.01
CASC4-204ENST00000557945 SEMA5AQ13591 1074 aa21.37■■□□□ 1.01
CASC4-204ENST00000557945 DHX34Q14147 1143 aaKnown RBP21.37■■□□□ 1.01
CASC4-204ENST00000557945 QPCTQ16769 361 aa21.37■■□□□ 1.01
CASC4-204ENST00000557945 ZC3H14Q6PJT7 736 aaKnown RBP21.37■■□□□ 1.01
CASC4-204ENST00000557945 SYDE1Q6ZW31 735 aaPredicted RBP21.37■■□□□ 1.01
CASC4-204ENST00000557945 C11orf74Q86VG3 221 aa21.37■■□□□ 1.01
CASC4-204ENST00000557945 JAMLQ86YT9 394 aa21.37■■□□□ 1.01
CASC4-204ENST00000557945 SMIM14Q96QK8 99 aa21.37■■□□□ 1.01
CASC4-204ENST00000557945 TBL1YQ9BQ87 522 aa21.37■■□□□ 1.01
CASC4-204ENST00000557945 KDM4CQ9H3R0 1056 aa21.37■■□□□ 1.01
CASC4-204ENST00000557945 LRRC40Q9H9A6 602 aa21.37■■□□□ 1.01
CASC4-204ENST00000557945 PREBQ9HCU5 417 aa21.37■■□□□ 1.01
CASC4-204ENST00000557945 GGT7Q9UJ14 662 aa21.37■■□□□ 1.01
CASC4-204ENST00000557945 EML5Q05BV3 1969 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 CTAGE15A4D2H0 777 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 ANKRD66B4E2M5 251 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 SPINT1O43278 529 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 TSPAN6O43657 245 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 RNGTTO60942 597 aaKnown RBP21.36■■□□□ 1.01
CASC4-204ENST00000557945 USP12O75317 370 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 AP2A1O95782 977 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 EPOP01588 193 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 APRTP07741 180 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 CTAGE8P0CG41 777 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 CYP2A6P11509 494 aaPredicted RBP21.36■■□□□ 1.01
CASC4-204ENST00000557945 ADCY8P40145 1251 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 MRPS25P82663 173 aaKnown RBP21.36■■□□□ 1.01
CASC4-204ENST00000557945 OLIG2Q13516 323 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 PTK6Q13882 451 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 PTPRRQ15256 657 aa21.36■■□□□ 1.01
CASC4-204ENST00000557945 SIRPB2Q5JXA9 342 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms