RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 FAM122AQ96E09 287 aa25.71■■□□□ 1.71
SMAD6-202ENST00000557916 FCRL5Q96RD9 977 aa25.71■■□□□ 1.71
SMAD6-202ENST00000557916 HINFPQ9BQA5 517 aa25.71■■□□□ 1.71
SMAD6-202ENST00000557916 GON4LQ3T8J9 2241 aa25.71■■□□□ 1.71
SMAD6-202ENST00000557916 C5orf60A6NFR6 353 aa25.71■■□□□ 1.71
SMAD6-202ENST00000557916 F5H423 210 aaPredicted RBP25.71■■□□□ 1.71
SMAD6-202ENST00000557916 CES2O00748 559 aa25.71■■□□□ 1.71
SMAD6-202ENST00000557916 LATO43561 262 aa25.71■■□□□ 1.71
SMAD6-202ENST00000557916 MT-CYBP00156 380 aaPredicted RBP25.71■■□□□ 1.71
SMAD6-202ENST00000557916 TCP1P17987 556 aaKnown RBP25.71■■□□□ 1.71
SMAD6-202ENST00000557916 RPS21P63220 83 aaKnown RBP25.71■■□□□ 1.71
SMAD6-202ENST00000557916 OASLQ15646 514 aaKnown RBP25.71■■□□□ 1.71
SMAD6-202ENST00000557916 SLC14A2Q15849 920 aa25.71■■□□□ 1.71
SMAD6-202ENST00000557916 PAPD7Q5XG87 772 aaKnown RBP25.71■■□□□ 1.71
SMAD6-202ENST00000557916 SEL1L3Q68CR1 1132 aa25.71■■□□□ 1.71
SMAD6-202ENST00000557916 CCDC110Q8TBZ0 833 aa25.71■■□□□ 1.71
SMAD6-202ENST00000557916 PIH1D2Q8WWB5 315 aa25.71■■□□□ 1.71
SMAD6-202ENST00000557916 TADA1Q96BN2 335 aa25.71■■□□□ 1.71
SMAD6-202ENST00000557916 SPATA13Q96N96 652 aa25.71■■□□□ 1.71
SMAD6-202ENST00000557916 NAP1L3Q99457 506 aaPredicted RBP25.71■■□□□ 1.71
SMAD6-202ENST00000557916 EBF2Q9HAK2 575 aa25.71■■□□□ 1.71
SMAD6-202ENST00000557916 PCDH9Q9HC56 1237 aa25.71■■□□□ 1.71
SMAD6-202ENST00000557916 UBP1Q9NZI7 540 aa25.71■■□□□ 1.71
SMAD6-202ENST00000557916 ZFR2Q9UPR6 939 aaKnown RBP25.71■■□□□ 1.71
SMAD6-202ENST00000557916 ZNF148Q9UQR1 794 aa25.71■■□□□ 1.71
SMAD6-202ENST00000557916 FRYLO94915 3013 aa25.7■■□□□ 1.71
SMAD6-202ENST00000557916 A0A1W2PPC4 97 aa25.7■■□□□ 1.7
SMAD6-202ENST00000557916 PGRMC1O00264 195 aaKnown RBP25.7■■□□□ 1.7
SMAD6-202ENST00000557916 STIP1P31948 543 aaKnown RBP25.7■■□□□ 1.7
SMAD6-202ENST00000557916 MMP12P39900 470 aa25.7■■□□□ 1.7
SMAD6-202ENST00000557916 GDF10P55107 478 aa25.7■■□□□ 1.7
SMAD6-202ENST00000557916 SEMG2Q02383 582 aa25.7■■□□□ 1.7
SMAD6-202ENST00000557916 TMEM52BQ4KMG9 183 aa25.7■■□□□ 1.7
SMAD6-202ENST00000557916 TMEM259Q4ZIN3 620 aa25.7■■□□□ 1.7
SMAD6-202ENST00000557916 PEAR1Q5VY43 1037 aaPredicted RBP25.7■■□□□ 1.7
SMAD6-202ENST00000557916 ACTRT1Q8TDG2 376 aa25.7■■□□□ 1.7
SMAD6-202ENST00000557916 CXorf40AQ8TE69 158 aa25.7■■□□□ 1.7
SMAD6-202ENST00000557916 KLK6Q92876 244 aa25.7■■□□□ 1.7
SMAD6-202ENST00000557916 ORAI3Q9BRQ5 295 aa25.7■■□□□ 1.7
SMAD6-202ENST00000557916 WRAP53Q9BUR4 548 aaKnown RBP25.7■■□□□ 1.7
SMAD6-202ENST00000557916 GBA3Q9H227 469 aa25.7■■□□□ 1.7
SMAD6-202ENST00000557916 HOMER3Q9NSC5 361 aa25.7■■□□□ 1.7
SMAD6-202ENST00000557916 ZNF185O15231 689 aa25.69■■□□□ 1.7
SMAD6-202ENST00000557916 GFRA3O60609 400 aa25.69■■□□□ 1.7
SMAD6-202ENST00000557916 OPHN1O60890 802 aa25.69■■□□□ 1.7
SMAD6-202ENST00000557916 PRLP01236 227 aa25.69■■□□□ 1.7
SMAD6-202ENST00000557916 PRLRP16471 622 aa25.69■■□□□ 1.7
SMAD6-202ENST00000557916 NFKBIAP25963 317 aa25.69■■□□□ 1.7
SMAD6-202ENST00000557916 HOXD12P35452 270 aa25.69■■□□□ 1.7
SMAD6-202ENST00000557916 EPHB1P54762 984 aa25.69■■□□□ 1.7
SMAD6-202ENST00000557916 CCDC6Q16204 474 aa25.69■■□□□ 1.7
SMAD6-202ENST00000557916 PCSK7Q16549 785 aa25.69■■□□□ 1.7
SMAD6-202ENST00000557916 ZNF284Q2VY69 593 aa25.69■■□□□ 1.7
SMAD6-202ENST00000557916 SETMARQ53H47 684 aaPredicted RBP25.69■■□□□ 1.7
SMAD6-202ENST00000557916 DRICH1Q6PGQ1 229 aaPredicted RBP25.69■■□□□ 1.7
SMAD6-202ENST00000557916 ZSCAN30Q86W11 494 aa25.69■■□□□ 1.7
SMAD6-202ENST00000557916 NDUFAF2Q8N183 169 aa25.69■■□□□ 1.7
SMAD6-202ENST00000557916 DCLK2Q8N568 766 aa25.69■■□□□ 1.7
SMAD6-202ENST00000557916 VPS45Q9NRW7 570 aa25.69■■□□□ 1.7
SMAD6-202ENST00000557916 SUSD2Q9UGT4 822 aa25.69■■□□□ 1.7
SMAD6-202ENST00000557916 FAM153AQ9UHL3 310 aa25.69■■□□□ 1.7
SMAD6-202ENST00000557916 OTOGLQ3ZCN5 2332 aa25.68■■□□□ 1.7
SMAD6-202ENST00000557916 IGLON5A6NGN9 336 aa25.68■■□□□ 1.7
SMAD6-202ENST00000557916 MMP20O60882 483 aa25.68■■□□□ 1.7
SMAD6-202ENST00000557916 PMPCBO75439 489 aa25.68■■□□□ 1.7
SMAD6-202ENST00000557916 GCATO75600 419 aa25.68■■□□□ 1.7
SMAD6-202ENST00000557916 GNSP15586 552 aa25.68■■□□□ 1.7
SMAD6-202ENST00000557916 NUDT1P36639 197 aa25.68■■□□□ 1.7
SMAD6-202ENST00000557916 PLA2G5P39877 138 aa25.68■■□□□ 1.7
SMAD6-202ENST00000557916 RPL26P61254 145 aaKnown RBP25.68■■□□□ 1.7
SMAD6-202ENST00000557916 SPEM2Q0P670 501 aa25.68■■□□□ 1.7
SMAD6-202ENST00000557916 PLA2G2CQ5R387 149 aa25.68■■□□□ 1.7
SMAD6-202ENST00000557916 ARHGEF18Q6ZSZ5 1173 aa25.68■■□□□ 1.7
SMAD6-202ENST00000557916 KDELC2Q7Z4H8 507 aa25.68■■□□□ 1.7
SMAD6-202ENST00000557916 ZCCHC9Q8N567 271 aaKnown RBP25.68■■□□□ 1.7
SMAD6-202ENST00000557916 PRELID2Q8N945 189 aa25.68■■□□□ 1.7
SMAD6-202ENST00000557916 LPCAT1Q8NF37 534 aa25.68■■□□□ 1.7
SMAD6-202ENST00000557916 C1orf216Q8TAB5 229 aa25.68■■□□□ 1.7
SMAD6-202ENST00000557916 SCRN2Q96FV2 425 aa25.68■■□□□ 1.7
SMAD6-202ENST00000557916 OXNAD1Q96HP4 312 aaPredicted RBP25.68■■□□□ 1.7
SMAD6-202ENST00000557916 SLC17A9Q9BYT1 436 aa25.68■■□□□ 1.7
SMAD6-202ENST00000557916 SMARCAL1Q9NZC9 954 aa25.68■■□□□ 1.7
SMAD6-202ENST00000557916 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.68■■□□□ 1.7
SMAD6-202ENST00000557916 B4GALT6Q9UBX8 382 aa25.68■■□□□ 1.7
SMAD6-202ENST00000557916 RPL26L1Q9UNX3 145 aaKnown RBP25.68■■□□□ 1.7
SMAD6-202ENST00000557916 DRG1Q9Y295 367 aaKnown RBP25.68■■□□□ 1.7
SMAD6-202ENST00000557916 PPIL1Q9Y3C6 166 aa25.68■■□□□ 1.7
SMAD6-202ENST00000557916 SAR1BQ9Y6B6 198 aa25.68■■□□□ 1.7
SMAD6-202ENST00000557916 SLCO1B1Q9Y6L6 691 aa25.68■■□□□ 1.7
SMAD6-202ENST00000557916 TNRC6BQ9UPQ9 1833 aaKnown RBP25.68■■□□□ 1.7
SMAD6-202ENST00000557916 A8MX80 341 aa25.67■■□□□ 1.7
SMAD6-202ENST00000557916 SLC31A1O15431 190 aa25.67■■□□□ 1.7
SMAD6-202ENST00000557916 ITGAVP06756 1048 aa25.67■■□□□ 1.7
SMAD6-202ENST00000557916 CTPS1P17812 591 aa25.67■■□□□ 1.7
SMAD6-202ENST00000557916 ETF1P62495 437 aaKnown RBP25.67■■□□□ 1.7
SMAD6-202ENST00000557916 CDK18Q07002 472 aa25.67■■□□□ 1.7
SMAD6-202ENST00000557916 SGCGQ13326 291 aa25.67■■□□□ 1.7
SMAD6-202ENST00000557916 DPPA4Q7L190 304 aa25.67■■□□□ 1.7
SMAD6-202ENST00000557916 RTP4Q96DX8 246 aa25.67■■□□□ 1.7
SMAD6-202ENST00000557916 IFT43Q96FT9 208 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms