RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 NR1H2P55055 460 aa5.07□□□□□ -1.6
GPHN-215ENST00000557654 ERVFC1-1P60608 527 aa5.07□□□□□ -1.6
GPHN-215ENST00000557654 GRIK3Q13003 919 aa5.07□□□□□ -1.6
GPHN-215ENST00000557654 BIRC3Q13489 604 aa5.07□□□□□ -1.6
GPHN-215ENST00000557654 ZNF766Q5HY98 468 aa5.07□□□□□ -1.6
GPHN-215ENST00000557654 FAM69BQ5VUD6 431 aa5.07□□□□□ -1.6
GPHN-215ENST00000557654 DLK2Q6UY11 383 aa5.07□□□□□ -1.6
GPHN-215ENST00000557654 LRRC8DQ7L1W4 858 aa5.07□□□□□ -1.6
GPHN-215ENST00000557654 TADA2BQ86TJ2 420 aa5.07□□□□□ -1.6
GPHN-215ENST00000557654 SLITRK1Q96PX8 696 aa5.07□□□□□ -1.6
GPHN-215ENST00000557654 MXRA8Q9BRK3 442 aa5.07□□□□□ -1.6
GPHN-215ENST00000557654 INTS2Q9H0H0 1204 aaKnown RBP5.07□□□□□ -1.6
GPHN-215ENST00000557654 CISD1Q9NZ45 108 aaKnown RBP5.07□□□□□ -1.6
GPHN-215ENST00000557654 HSPB7Q9UBY9 170 aa5.07□□□□□ -1.6
GPHN-215ENST00000557654 CNOT7Q9UIV1 285 aaKnown RBP5.07□□□□□ -1.6
GPHN-215ENST00000557654 PAM16Q9Y3D7 125 aa5.07□□□□□ -1.6
GPHN-215ENST00000557654 SYNJ1O43426 1573 aa5.07□□□□□ -1.6
GPHN-215ENST00000557654 PEG3Q9GZU2 1588 aa5.07□□□□□ -1.6
GPHN-215ENST00000557654 MAPKBP1O60336 1514 aa5.07□□□□□ -1.6
GPHN-215ENST00000557654 ARAP1Q96P48 1450 aa5.07□□□□□ -1.6
GPHN-215ENST00000557654 RAPGEF2Q9Y4G8 1499 aa5.07□□□□□ -1.6
GPHN-215ENST00000557654 EME2A4GXA9 379 aaPredicted RBP5.06□□□□□ -1.6
GPHN-215ENST00000557654 ZIC3O60481 467 aa5.06□□□□□ -1.6
GPHN-215ENST00000557654 GALTP07902 379 aa5.06□□□□□ -1.6
GPHN-215ENST00000557654 PSMC2P35998 433 aaKnown RBP5.06□□□□□ -1.6
GPHN-215ENST00000557654 MAPK9P45984 424 aa5.06□□□□□ -1.6
GPHN-215ENST00000557654 PPM1FP49593 454 aaPredicted RBP5.06□□□□□ -1.6
GPHN-215ENST00000557654 TAF11Q15544 211 aa5.06□□□□□ -1.6
GPHN-215ENST00000557654 EFNB3Q15768 340 aa5.06□□□□□ -1.6
GPHN-215ENST00000557654 KIF19Q2TAC6 998 aa5.06□□□□□ -1.6
GPHN-215ENST00000557654 PAPPA-AS1Q5QFB9 102 aa5.06□□□□□ -1.6
GPHN-215ENST00000557654 TMEM81Q6P7N7 255 aa5.06□□□□□ -1.6
GPHN-215ENST00000557654 SPSB3Q6PJ21 355 aa5.06□□□□□ -1.6
GPHN-215ENST00000557654 MYRIPQ8NFW9 859 aa5.06□□□□□ -1.6
GPHN-215ENST00000557654 SNAPC3Q92966 411 aa5.06□□□□□ -1.6
GPHN-215ENST00000557654 LRFN5Q96NI6 719 aa5.06□□□□□ -1.6
GPHN-215ENST00000557654 RETREG1Q9H6L5 497 aa5.06□□□□□ -1.6
GPHN-215ENST00000557654 DDX31Q9H8H2 851 aaKnown RBP5.06□□□□□ -1.6
GPHN-215ENST00000557654 ZNF556Q9HAH1 456 aa5.06□□□□□ -1.6
GPHN-215ENST00000557654 DDX4Q9NQI0 724 aaKnown RBP5.06□□□□□ -1.6
GPHN-215ENST00000557654 MAP3K1Q13233 1512 aa5.06□□□□□ -1.6
GPHN-215ENST00000557654 CCNB3Q8WWL7 1395 aa5.05□□□□□ -1.6
GPHN-215ENST00000557654 IGLV5-37A0A075B6J1 123 aa5.05□□□□□ -1.6
GPHN-215ENST00000557654 RRN3P2A6NIE6 340 aa5.05□□□□□ -1.6
GPHN-215ENST00000557654 BCAT2O15382 392 aaPredicted RBP5.05□□□□□ -1.6
GPHN-215ENST00000557654 DDNO94850 711 aaPredicted RBP5.05□□□□□ -1.6
GPHN-215ENST00000557654 POU1F1P28069 291 aa5.05□□□□□ -1.6
GPHN-215ENST00000557654 GPD2P43304 727 aa5.05□□□□□ -1.6
GPHN-215ENST00000557654 GALNT2Q10471 571 aa5.05□□□□□ -1.6
GPHN-215ENST00000557654 DLG1Q12959 904 aa5.05□□□□□ -1.6
GPHN-215ENST00000557654 VEPH1Q14D04 833 aa5.05□□□□□ -1.6
GPHN-215ENST00000557654 MMEL1Q495T6 779 aa5.05□□□□□ -1.6
GPHN-215ENST00000557654 FAM76BQ5HYJ3 339 aa5.05□□□□□ -1.6
GPHN-215ENST00000557654 KLHL24Q6TFL4 600 aa5.05□□□□□ -1.6
GPHN-215ENST00000557654 ZC3HC1Q86WB0 502 aaKnown RBP5.05□□□□□ -1.6
GPHN-215ENST00000557654 TDRPQ86YL5 185 aa5.05□□□□□ -1.6
GPHN-215ENST00000557654 DHX40Q8IX18 779 aaKnown RBP5.05□□□□□ -1.6
GPHN-215ENST00000557654 SIN3AQ96ST3 1273 aa5.05□□□□□ -1.6
GPHN-215ENST00000557654 C20orf141Q9NUB4 165 aa5.05□□□□□ -1.6
GPHN-215ENST00000557654 BEX4Q9NWD9 120 aaPredicted RBP5.05□□□□□ -1.6
GPHN-215ENST00000557654 CDC14AQ9UNH5 594 aa5.05□□□□□ -1.6
GPHN-215ENST00000557654 CARD8Q9Y2G2 431 aa5.05□□□□□ -1.6
GPHN-215ENST00000557654 SNX9Q9Y5X1 595 aa5.05□□□□□ -1.6
GPHN-215ENST00000557654 PRXQ9BXM0 1461 aa5.05□□□□□ -1.6
GPHN-215ENST00000557654 LOC102724159A0A0B4J2E5 919 aa5.04□□□□□ -1.6
GPHN-215ENST00000557654 GOLGA6L10A0A0M3HER8 536 aa5.04□□□□□ -1.6
GPHN-215ENST00000557654 TNPO2O14787 897 aaKnown RBP5.04□□□□□ -1.6
GPHN-215ENST00000557654 IGHV4-30-4P0DP06 118 aa5.04□□□□□ -1.6
GPHN-215ENST00000557654 PCNAP12004 261 aa5.04□□□□□ -1.6
GPHN-215ENST00000557654 CCT5P48643 541 aa5.04□□□□□ -1.6
GPHN-215ENST00000557654 BRWD1-AS2P59051 145 aa5.04□□□□□ -1.6
GPHN-215ENST00000557654 ITGADQ13349 1161 aa5.04□□□□□ -1.6
GPHN-215ENST00000557654 SNTA1Q13424 505 aa5.04□□□□□ -1.6
GPHN-215ENST00000557654 PWP2Q15269 919 aaKnown RBP5.04□□□□□ -1.6
GPHN-215ENST00000557654 HIST2H2BCQ6DN03 193 aa5.04□□□□□ -1.6
GPHN-215ENST00000557654 HIST2H2BDQ6DRA6 164 aa5.04□□□□□ -1.6
GPHN-215ENST00000557654 FBXO46Q6PJ61 603 aaPredicted RBP5.04□□□□□ -1.6
GPHN-215ENST00000557654 B3GNT6Q6ZMB0 384 aa5.04□□□□□ -1.6
GPHN-215ENST00000557654 TMTC1Q8IUR5 882 aa5.04□□□□□ -1.6
GPHN-215ENST00000557654 SPATA20Q8TB22 786 aa5.04□□□□□ -1.6
GPHN-215ENST00000557654 IGSF21Q96ID5 467 aa5.04□□□□□ -1.6
GPHN-215ENST00000557654 BBS4Q96RK4 519 aa5.04□□□□□ -1.6
GPHN-215ENST00000557654 SMYD2Q9NRG4 433 aa5.04□□□□□ -1.6
GPHN-215ENST00000557654 NFE2L3Q9Y4A8 694 aa5.04□□□□□ -1.6
GPHN-215ENST00000557654 NFS1Q9Y697 457 aa5.04□□□□□ -1.6
GPHN-215ENST00000557654 CPED1A4D0V7 1026 aa5.03□□□□□ -1.6
GPHN-215ENST00000557654 NCAM2O15394 837 aa5.03□□□□□ -1.6
GPHN-215ENST00000557654 GUCY1B2O75343 617 aa5.03□□□□□ -1.6
GPHN-215ENST00000557654 KDM4BO94953 1096 aa5.03□□□□□ -1.6
GPHN-215ENST00000557654 PYGLP06737 847 aa5.03□□□□□ -1.6
GPHN-215ENST00000557654 HEXAP06865 529 aa5.03□□□□□ -1.6
GPHN-215ENST00000557654 IFIT1P09914 478 aaKnown RBP5.03□□□□□ -1.6
GPHN-215ENST00000557654 ETFAP13804 333 aa5.03□□□□□ -1.6
GPHN-215ENST00000557654 DEKP35659 375 aaKnown RBP5.03□□□□□ -1.6
GPHN-215ENST00000557654 UFM1P61960 85 aa5.03□□□□□ -1.6
GPHN-215ENST00000557654 TLE2Q04725 743 aa5.03□□□□□ -1.6
GPHN-215ENST00000557654 TRPC3Q13507 836 aa5.03□□□□□ -1.6
GPHN-215ENST00000557654 ANKRD54Q6NXT1 300 aa5.03□□□□□ -1.6
GPHN-215ENST00000557654 ZNF354CQ86Y25 554 aa5.03□□□□□ -1.6
GPHN-215ENST00000557654 CREB3L4Q8TEY5 395 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms