RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 SRCP12931 536 aa12.55□□□□□ -0.4
SHMT2-233ENST00000557529 DRD4P21917 467 aa12.55□□□□□ -0.4
SHMT2-233ENST00000557529 GRIA4P48058 902 aa12.55□□□□□ -0.4
SHMT2-233ENST00000557529 CD151P48509 253 aa12.55□□□□□ -0.4
SHMT2-233ENST00000557529 SNRPD1P62314 119 aaKnown RBP12.55□□□□□ -0.4
SHMT2-233ENST00000557529 BCL2L1Q07817 233 aa12.55□□□□□ -0.4
SHMT2-233ENST00000557529 DHCR24Q15392 516 aa12.55□□□□□ -0.4
SHMT2-233ENST00000557529 PDK4Q16654 411 aa12.55□□□□□ -0.4
SHMT2-233ENST00000557529 INSCQ1MX18 579 aa12.55□□□□□ -0.4
SHMT2-233ENST00000557529 FAM78AQ5JUQ0 283 aa12.55□□□□□ -0.4
SHMT2-233ENST00000557529 ARMC12Q5T9G4 340 aa12.55□□□□□ -0.4
SHMT2-233ENST00000557529 ZNF470Q6ECI4 717 aa12.55□□□□□ -0.4
SHMT2-233ENST00000557529 C22orf39Q6P5X5 142 aa12.55□□□□□ -0.4
SHMT2-233ENST00000557529 KYAT3Q6YP21 454 aaKnown RBP12.55□□□□□ -0.4
SHMT2-233ENST00000557529 GLT6D1Q7Z4J2 308 aa12.55□□□□□ -0.4
SHMT2-233ENST00000557529 KIAA0907Q7Z7F0 614 aaPredicted RBP12.55□□□□□ -0.4
SHMT2-233ENST00000557529 PCDH20Q8N6Y1 951 aaKnown RBP12.55□□□□□ -0.4
SHMT2-233ENST00000557529 OR2AP1Q8NGE2 309 aa12.55□□□□□ -0.4
SHMT2-233ENST00000557529 BPIFB1Q8TDL5 484 aa12.55□□□□□ -0.4
SHMT2-233ENST00000557529 FGF13Q92913 245 aa12.55□□□□□ -0.4
SHMT2-233ENST00000557529 MYO19Q96H55 970 aa12.55□□□□□ -0.4
SHMT2-233ENST00000557529 TUBGCP5Q96RT8 1024 aa12.55□□□□□ -0.4
SHMT2-233ENST00000557529 GPR22Q99680 433 aa12.55□□□□□ -0.4
SHMT2-233ENST00000557529 SLC13A1Q9BZW2 595 aa12.55□□□□□ -0.4
SHMT2-233ENST00000557529 TM6SF2Q9BZW4 377 aa12.55□□□□□ -0.4
SHMT2-233ENST00000557529 FAM107BQ9H098 131 aa12.55□□□□□ -0.4
SHMT2-233ENST00000557529 RABEP2Q9H5N1 569 aa12.55□□□□□ -0.4
SHMT2-233ENST00000557529 ATP13A3Q9H7F0 1226 aa12.55□□□□□ -0.4
SHMT2-233ENST00000557529 TRPV4Q9HBA0 871 aa12.55□□□□□ -0.4
SHMT2-233ENST00000557529 SLC17A7Q9P2U7 560 aa12.55□□□□□ -0.4
SHMT2-233ENST00000557529 GGT7Q9UJ14 662 aa12.55□□□□□ -0.4
SHMT2-233ENST00000557529 FBXO5Q9UKT4 447 aa12.55□□□□□ -0.4
SHMT2-233ENST00000557529 GRID1Q9ULK0 1009 aa12.55□□□□□ -0.4
SHMT2-233ENST00000557529 MTO1Q9Y2Z2 717 aaKnown RBP12.55□□□□□ -0.4
SHMT2-233ENST00000557529 FZD6O60353 706 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 PGLSO95336 258 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 NFATC1O95644 943 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 AHSGP02765 367 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 CYP17A1P05093 508 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 GSTA1P08263 222 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 PDHA1P08559 390 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 DHRS4L1P0CG22 281 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 ADH5P11766 374 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 HOXB8P17481 243 aaPredicted RBP12.54□□□□□ -0.4
SHMT2-233ENST00000557529 POLR2EP19388 210 aaKnown RBP12.54□□□□□ -0.4
SHMT2-233ENST00000557529 PSMA3P25788 255 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 SLC1A2P43004 574 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 ETV4P43268 484 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 EPHB1P54762 984 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 ECT2LQ008S8 904 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 HYAL1Q12794 435 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 PDE1CQ14123 709 aaPredicted RBP12.54□□□□□ -0.4
SHMT2-233ENST00000557529 GRM3Q14832 879 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 ZSCAN26Q16670 478 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 QPCTQ16769 361 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 EML3Q32P44 896 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 COL13A1Q5TAT6 717 aaPredicted RBP12.54□□□□□ -0.4
SHMT2-233ENST00000557529 ASTLQ6HA08 431 aaPredicted RBP12.54□□□□□ -0.4
SHMT2-233ENST00000557529 ANKRD54Q6NXT1 300 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 LCA5Q86VQ0 697 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 LRRC34Q8IZ02 419 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 TDHQ8IZJ6 230 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 RYBPQ8N488 228 aaPredicted RBP12.54□□□□□ -0.4
SHMT2-233ENST00000557529 OTUD6BQ8N6M0 293 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 GPR150Q8NGU9 434 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 OR6P1Q8NGX9 317 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 LRRC8CQ8TDW0 803 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 WFIKKN2Q8TEU8 576 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 PDCD6IPQ8WUM4 868 aaKnown RBP12.54□□□□□ -0.4
SHMT2-233ENST00000557529 SCG3Q8WXD2 468 aaKnown RBP12.54□□□□□ -0.4
SHMT2-233ENST00000557529 HDAC10Q969S8 669 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 E2F7Q96AV8 911 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 FAM111AQ96PZ2 611 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 SNX15Q9NRS6 342 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 NLE1Q9NVX2 485 aaPredicted RBP12.54□□□□□ -0.4
SHMT2-233ENST00000557529 THG1LQ9NWX6 298 aaKnown RBP12.54□□□□□ -0.4
SHMT2-233ENST00000557529 EVLQ9UI08 416 aaPredicted RBP12.54□□□□□ -0.4
SHMT2-233ENST00000557529 FBXO10Q9UK96 956 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 ANKRD6Q9Y2G4 727 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 PCDHB9Q9Y5E1 797 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 SPO11Q9Y5K1 396 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 ARL5AQ9Y689 179 aa12.54□□□□□ -0.4
SHMT2-233ENST00000557529 NUP210Q8TEM1 1887 aaPredicted RBP12.54□□□□□ -0.4
SHMT2-233ENST00000557529 CEP290O15078 2479 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 ATG2AQ2TAZ0 1938 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 ERICH4A6NGS2 130 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 RFXAPO00287 272 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 HTRA2O43464 458 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-233ENST00000557529 GLP2RO95838 553 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 ASLP04424 464 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 PRKCGP05129 697 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 PIRTP0C851 137 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 TAC1P20366 129 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 OGNP20774 298 aaKnown RBP12.53□□□□□ -0.4
SHMT2-233ENST00000557529 LPOP22079 712 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-233ENST00000557529 SERPINA4P29622 427 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 FOXN2P32314 431 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 VIPR2P41587 438 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 CTSOP43234 321 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-233ENST00000557529 LEPRP48357 1165 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms