RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 SLC14A2Q15849 920 aa16.4■□□□□ 0.22
SHMT2-232ENST00000557487 C6orf10Q5SRN2 563 aa16.4■□□□□ 0.22
SHMT2-232ENST00000557487 PAQR9Q6ZVX9 377 aa16.4■□□□□ 0.22
SHMT2-232ENST00000557487 CUZD1Q86UP6 607 aa16.4■□□□□ 0.22
SHMT2-232ENST00000557487 OSTM1Q86WC4 334 aa16.4■□□□□ 0.22
SHMT2-232ENST00000557487 HMGCLL1Q8TB92 370 aa16.4■□□□□ 0.22
SHMT2-232ENST00000557487 MOCOSQ96EN8 888 aa16.4■□□□□ 0.22
SHMT2-232ENST00000557487 ASB2Q96Q27 587 aa16.4■□□□□ 0.22
SHMT2-232ENST00000557487 OSBPL6Q9BZF3 934 aa16.4■□□□□ 0.22
SHMT2-232ENST00000557487 ULBP1Q9BZM6 244 aa16.4■□□□□ 0.22
SHMT2-232ENST00000557487 PCDHAC1Q9H158 963 aa16.4■□□□□ 0.22
SHMT2-232ENST00000557487 SEMA6AQ9H2E6 1030 aa16.4■□□□□ 0.22
SHMT2-232ENST00000557487 MUC13Q9H3R2 512 aa16.4■□□□□ 0.22
SHMT2-232ENST00000557487 TXNRD2Q9NNW7 524 aa16.4■□□□□ 0.22
SHMT2-232ENST00000557487 IGSF5Q9NSI5 407 aa16.4■□□□□ 0.22
SHMT2-232ENST00000557487 CCM2LQ9NUG4 571 aaPredicted RBP16.4■□□□□ 0.22
SHMT2-232ENST00000557487 CDH7Q9ULB5 785 aa16.4■□□□□ 0.22
SHMT2-232ENST00000557487 TMEM233B4DJY2 109 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 F7P08709 466 aaPredicted RBP16.39■□□□□ 0.21
SHMT2-232ENST00000557487 LTA4HP09960 611 aaKnown RBP16.39■□□□□ 0.21
SHMT2-232ENST00000557487 ZNF286BP0CG31 522 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 HOXD8P13378 290 aaPredicted RBP16.39■□□□□ 0.21
SHMT2-232ENST00000557487 CPB1P15086 417 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 MYF6P23409 242 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 NDUFV1P49821 464 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 MPP1Q00013 466 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 ACAP2Q15057 778 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 HFE2Q6ZVN8 426 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 LZTR1Q8N653 840 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 KLHL23Q8NBE8 558 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 RNF169Q8NCN4 708 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 ZNF420Q8TAQ5 688 aaPredicted RBP16.39■□□□□ 0.21
SHMT2-232ENST00000557487 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.39■□□□□ 0.21
SHMT2-232ENST00000557487 PPWD1Q96BP3 646 aaKnown RBP16.39■□□□□ 0.21
SHMT2-232ENST00000557487 SLC45A3Q96JT2 553 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 MED10Q9BTT4 135 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 OSBPL2Q9H1P3 480 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 R3HDMLQ9H3Y0 253 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 NXF3Q9H4D5 531 aaKnown RBP16.39■□□□□ 0.21
SHMT2-232ENST00000557487 WDCPQ9H6R7 721 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 CDHR5Q9HBB8 845 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 CD320Q9NPF0 282 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 TREX1Q9NSU2 369 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 DDIT4Q9NX09 232 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 DUS2Q9NX74 493 aaKnown RBP16.39■□□□□ 0.21
SHMT2-232ENST00000557487 OR12D3Q9UGF7 316 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 FBXO5Q9UKT4 447 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 FAF1Q9UNN5 650 aaPredicted RBP16.39■□□□□ 0.21
SHMT2-232ENST00000557487 SH3PXD2BA1X283 911 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 GABRDO14764 452 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 CSPG5O95196 566 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 FCGR1AP12314 374 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 LRPAP1P30533 357 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 SLC1A2P43004 574 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 LILRA4P59901 499 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 RAB41Q5JT25 222 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 ZNF618Q5T7W0 954 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 HMBOX1Q6NT76 420 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 ISLR2Q6UXK2 745 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 ZNF554Q86TJ5 538 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 MFSD6LQ8IWD5 586 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 DENND6AQ8IWF6 608 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 MYO1HQ8N1T3 1032 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 CYP2S1Q96SQ9 504 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 IL12RB2Q99665 862 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 SLC29A1Q99808 456 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 OMDQ99983 421 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 TRIM62Q9BVG3 475 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 CFHR5Q9BXR6 569 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 NOL11Q9H8H0 719 aaKnown RBP16.39■□□□□ 0.21
SHMT2-232ENST00000557487 GLOD4Q9HC38 313 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 ACSS2Q9NR19 701 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 RNF186Q9NXI6 227 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 NDUFAF1Q9Y375 327 aa16.39■□□□□ 0.21
SHMT2-232ENST00000557487 A8MT66 165 aa16.38■□□□□ 0.21
SHMT2-232ENST00000557487 NRP1O14786 923 aa16.38■□□□□ 0.21
SHMT2-232ENST00000557487 GPR32O75388 356 aa16.38■□□□□ 0.21
SHMT2-232ENST00000557487 BEST1O76090 585 aa16.38■□□□□ 0.21
SHMT2-232ENST00000557487 NCAM1P13591 858 aa16.38■□□□□ 0.21
SHMT2-232ENST00000557487 DARSP14868 501 aaKnown RBP16.38■□□□□ 0.21
SHMT2-232ENST00000557487 IL10P22301 178 aa16.38■□□□□ 0.21
SHMT2-232ENST00000557487 ARNTP27540 789 aa16.38■□□□□ 0.21
SHMT2-232ENST00000557487 ATP6V0D1P61421 351 aa16.38■□□□□ 0.21
SHMT2-232ENST00000557487 PRKCQQ04759 706 aa16.38■□□□□ 0.21
SHMT2-232ENST00000557487 CTBP1Q13363 440 aa16.38■□□□□ 0.21
SHMT2-232ENST00000557487 Q3C1V9 767 aa16.38■□□□□ 0.21
SHMT2-232ENST00000557487 CIB1Q99828 191 aa16.38■□□□□ 0.21
SHMT2-232ENST00000557487 C9orf16Q9BUW7 83 aa16.38■□□□□ 0.21
SHMT2-232ENST00000557487 YTHDF1Q9BYJ9 559 aaKnown RBP16.38■□□□□ 0.21
SHMT2-232ENST00000557487 ANLNQ9NQW6 1124 aa16.38■□□□□ 0.21
SHMT2-232ENST00000557487 ARHGEF38Q9NXL2 777 aa16.38■□□□□ 0.21
SHMT2-232ENST00000557487 CCDC167Q9P0B6 97 aa16.38■□□□□ 0.21
SHMT2-232ENST00000557487 ABCD2Q9UBJ2 740 aa16.38■□□□□ 0.21
SHMT2-232ENST00000557487 GJD2Q9UKL4 321 aa16.38■□□□□ 0.21
SHMT2-232ENST00000557487 TRAF6Q9Y4K3 522 aa16.38■□□□□ 0.21
SHMT2-232ENST00000557487 PTCH2Q9Y6C5 1203 aa16.38■□□□□ 0.21
SHMT2-232ENST00000557487 YJEFN3A6XGL0 299 aa16.37■□□□□ 0.21
SHMT2-232ENST00000557487 LRIG2O94898 1065 aa16.37■□□□□ 0.21
SHMT2-232ENST00000557487 ALDH1A1P00352 501 aa16.37■□□□□ 0.21
SHMT2-232ENST00000557487 HSD17B1P14061 328 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms