RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 IKBIPQ70UQ0 350 aa4.86□□□□□ -1.63
PRPF39-212ENST00000557477 ANKRD13BQ86YJ7 626 aa4.86□□□□□ -1.63
PRPF39-212ENST00000557477 TDRPQ86YL5 185 aa4.86□□□□□ -1.63
PRPF39-212ENST00000557477 LURAP1LQ8IV03 231 aa4.86□□□□□ -1.63
PRPF39-212ENST00000557477 DHX40Q8IX18 779 aaKnown RBP4.86□□□□□ -1.63
PRPF39-212ENST00000557477 NME8Q8N427 588 aa4.86□□□□□ -1.63
PRPF39-212ENST00000557477 KDM1BQ8NB78 822 aa4.86□□□□□ -1.63
PRPF39-212ENST00000557477 TMEM116Q8NCL8 245 aa4.86□□□□□ -1.63
PRPF39-212ENST00000557477 SLC44A5Q8NCS7 719 aa4.86□□□□□ -1.63
PRPF39-212ENST00000557477 NTN5Q8WTR8 489 aaPredicted RBP4.86□□□□□ -1.63
PRPF39-212ENST00000557477 PABPC5Q96DU9 382 aaKnown RBP4.86□□□□□ -1.63
PRPF39-212ENST00000557477 TIGD1Q96MW7 591 aa4.86□□□□□ -1.63
PRPF39-212ENST00000557477 BBS4Q96RK4 519 aa4.86□□□□□ -1.63
PRPF39-212ENST00000557477 SLITRK6Q9H5Y7 841 aa4.86□□□□□ -1.63
PRPF39-212ENST00000557477 EIF2B3Q9NR50 452 aaKnown RBP4.86□□□□□ -1.63
PRPF39-212ENST00000557477 NCKIPSDQ9NZQ3 722 aa4.86□□□□□ -1.63
PRPF39-212ENST00000557477 SEL1LQ9UBV2 794 aa4.86□□□□□ -1.63
PRPF39-212ENST00000557477 CORO1CQ9ULV4 474 aaPredicted RBP4.86□□□□□ -1.63
PRPF39-212ENST00000557477 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.86□□□□□ -1.63
PRPF39-212ENST00000557477 SLC45A1Q9Y2W3 748 aa4.86□□□□□ -1.63
PRPF39-212ENST00000557477 JCADQ9P266 1359 aa4.86□□□□□ -1.63
PRPF39-212ENST00000557477 UBR1Q8IWV7 1749 aa4.86□□□□□ -1.63
PRPF39-212ENST00000557477 A0A1W2PQF6 199 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 C17orf102A2RUQ5 167 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 LIPT2A6NK58 231 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 HSPB2A8KAH6 182 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 NPIPB11E5RHQ5 1161 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 HSPB6O14558 160 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 AP3D1O14617 1153 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 CNOT3O75175 753 aaKnown RBP4.85□□□□□ -1.63
PRPF39-212ENST00000557477 CLDN7O95471 211 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 CELA2AP08217 269 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 PRR35P0CG20 571 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 PTPN2P17706 415 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 NFKBIAP25963 317 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 TM4SF1P30408 202 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 RFC1P35251 1148 aaPredicted RBP4.85□□□□□ -1.63
PRPF39-212ENST00000557477 HOXD13P35453 343 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 HADHAP40939 763 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 CXCR3P49682 368 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 CLCN5P51795 746 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 HDAC4P56524 1084 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 GRIK3Q13003 919 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 RUNX2Q13950 521 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 PPP2R5BQ15173 497 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 HSPB2Q16082 182 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 SMN1Q16637 294 aaKnown RBP4.85□□□□□ -1.63
PRPF39-212ENST00000557477 GSTA3Q16772 222 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 GLIPR1L2Q4G1C9 344 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 ZKSCAN2Q63HK3 967 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 TTI2Q6NXR4 508 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 KLHL24Q6TFL4 600 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 C16orf54Q6UWD8 224 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 CCDC129Q6ZRS4 1044 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 TBC1D26Q86UD7 250 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 DNAJC10Q8IXB1 793 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 FAM217AQ8IXS0 508 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 FAM185AQ8N0U4 392 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 PDILTQ8N807 584 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 FRMD1Q8N878 549 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 WDFY2Q96P53 400 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 YME1L1Q96TA2 773 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 B3GNT4Q9C0J1 378 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 LHPPQ9H008 270 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 MVB12BQ9H7P6 319 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 MAP6D1Q9H9H5 199 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 POLR1BQ9H9Y6 1135 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 HAUS2Q9NVX0 235 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 SLCO3A1Q9UIG8 710 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 COG5Q9UP83 839 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 ADAM18Q9Y3Q7 739 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.85□□□□□ -1.63
PRPF39-212ENST00000557477 CEP162Q5TB80 1403 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 MBD5Q9P267 1494 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 EFCAB6Q5THR3 1501 aa4.85□□□□□ -1.63
PRPF39-212ENST00000557477 EIF2AK4Q9P2K8 1649 aaKnown RBP4.85□□□□□ -1.63
PRPF39-212ENST00000557477 ARHGEF17Q96PE2 2063 aaPredicted RBP4.84□□□□□ -1.63
PRPF39-212ENST00000557477 PIK3C2BO00750 1634 aa4.84□□□□□ -1.63
PRPF39-212ENST00000557477 ARHGEF5Q12774 1597 aa4.84□□□□□ -1.63
PRPF39-212ENST00000557477 NKTRP30414 1462 aaKnown RBP4.84□□□□□ -1.63
PRPF39-212ENST00000557477 FAM135BQ49AJ0 1406 aa4.84□□□□□ -1.63
PRPF39-212ENST00000557477 A0A096LPK6 155 aa4.84□□□□□ -1.63
PRPF39-212ENST00000557477 FAM237BA0A1B0GVD1 139 aa4.84□□□□□ -1.63
PRPF39-212ENST00000557477 ZNF814B7Z6K7 855 aa4.84□□□□□ -1.63
PRPF39-212ENST00000557477 K7ENM7 598 aa4.84□□□□□ -1.63
PRPF39-212ENST00000557477 GTPBP1O00178 669 aaKnown RBP4.84□□□□□ -1.63
PRPF39-212ENST00000557477 TAF4O00268 1085 aa4.84□□□□□ -1.63
PRPF39-212ENST00000557477 PAGE4O60829 102 aa4.84□□□□□ -1.63
PRPF39-212ENST00000557477 ATG13O75143 517 aa4.84□□□□□ -1.63
PRPF39-212ENST00000557477 ZNF8P17098 575 aaPredicted RBP4.84□□□□□ -1.63
PRPF39-212ENST00000557477 GPR12P47775 334 aa4.84□□□□□ -1.63
PRPF39-212ENST00000557477 GNAQP50148 359 aa4.84□□□□□ -1.63
PRPF39-212ENST00000557477 CLNS1AP54105 237 aaKnown RBP4.84□□□□□ -1.63
PRPF39-212ENST00000557477 KRTAP1-1Q07627 177 aa4.84□□□□□ -1.63
PRPF39-212ENST00000557477 SRSF4Q08170 494 aaKnown RBP4.84□□□□□ -1.63
PRPF39-212ENST00000557477 MTX1Q13505 466 aa4.84□□□□□ -1.63
PRPF39-212ENST00000557477 CAPSQ13938 189 aa4.84□□□□□ -1.63
PRPF39-212ENST00000557477 CCNG2Q16589 344 aa4.84□□□□□ -1.63
PRPF39-212ENST00000557477 NCEH1Q6PIU2 408 aa4.84□□□□□ -1.63
PRPF39-212ENST00000557477 NOXA1Q86UR1 476 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms