RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 GTPBP1O00178 669 aaKnown RBP8.88□□□□□ -0.99
SYNE3-205ENST00000557275 DCXO43602 365 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 GH1P01241 217 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 ANXA2P07355 339 aaKnown RBP8.88□□□□□ -0.99
SYNE3-205ENST00000557275 DBTP11182 482 aaKnown RBP8.88□□□□□ -0.99
SYNE3-205ENST00000557275 SETMARQ53H47 684 aaPredicted RBP8.88□□□□□ -0.99
SYNE3-205ENST00000557275 MIIPQ5JXC2 388 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 CWF19L1Q69YN2 538 aaKnown RBP8.88□□□□□ -0.99
SYNE3-205ENST00000557275 ADGRG2Q8IZP9 1017 aa8.88□□□□□ -0.99
SYNE3-205ENST00000557275 TTLL13PA6NNM8 815 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 SSX4O60224 188 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 OR10H2O60403 315 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 GRIA1P42261 906 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 TOMM20Q15388 145 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 ZZZ3Q8IYH5 903 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 MSL3Q8N5Y2 521 aaKnown RBP8.87□□□□□ -0.99
SYNE3-205ENST00000557275 TNFSF13BQ9Y275 285 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 OAS3Q9Y6K5 1087 aaKnown RBP8.87□□□□□ -0.99
SYNE3-205ENST00000557275 PDYNP01213 254 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 PROCP04070 461 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 POLD2P49005 469 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 SWT1Q5T5J6 900 aaKnown RBP8.87□□□□□ -0.99
SYNE3-205ENST00000557275 SVOPLQ8N434 492 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 TSEN15Q8WW01 171 aaKnown RBP8.87□□□□□ -0.99
SYNE3-205ENST00000557275 CATSPERZQ9NTU4 200 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 TMEM184CQ9NVA4 438 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 PPIEQ9UNP9 301 aaKnown RBP8.87□□□□□ -0.99
SYNE3-205ENST00000557275 ZNF780BQ9Y6R6 833 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 ZFYVE16Q7Z3T8 1539 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 TDP2O95551 362 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 SLC9A3P48764 834 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 KLHL22Q53GT1 634 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 BEND7Q8N7W2 519 aaPredicted RBP8.87□□□□□ -0.99
SYNE3-205ENST00000557275 FUT8Q9BYC5 575 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 TLX3O43711 291 aaPredicted RBP8.87□□□□□ -0.99
SYNE3-205ENST00000557275 NADKO95544 446 aaPredicted RBP8.87□□□□□ -0.99
SYNE3-205ENST00000557275 ADAM17P78536 824 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 NT5DC3Q86UY8 548 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 FUKQ8N0W3 1084 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 C9orf43Q8TAL5 461 aaPredicted RBP8.87□□□□□ -0.99
SYNE3-205ENST00000557275 MID1O15344 667 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 PGRP06401 933 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 FDPSP14324 419 aaKnown RBP8.87□□□□□ -0.99
SYNE3-205ENST00000557275 PLEKHG4Q58EX7 1191 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 HSDL2Q6YN16 418 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 KCNK18Q7Z418 384 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 TTC7BQ86TV6 843 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 WDSUB1Q8N9V3 476 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 KAT2AQ92830 837 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 RBM47A0AV96 593 aaKnown RBP8.87□□□□□ -0.99
SYNE3-205ENST00000557275 C19orf81C9J6K1 198 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 M0QYT0 321 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 IGSF6O95976 241 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 TYMPP19971 482 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 ZDHHC20Q5W0Z9 365 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 POF1BQ8WVV4 589 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 LY9Q9HBG7 655 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 TOR4AQ9NXH8 423 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 FADS2P1A8MWK0 482 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 GLRBP48167 497 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 DEFA5Q01523 94 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 CFAP206Q8IYR0 622 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 WRNIP1Q96S55 665 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 GREM2Q9H772 168 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 MAU2Q9Y6X3 613 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 RP2O75695 350 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 A1BGP04217 495 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 BGNP21810 368 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 CREMQ03060 361 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 OGFRL1Q5TC84 451 aaPredicted RBP8.87□□□□□ -0.99
SYNE3-205ENST00000557275 CIAPIN1Q6FI81 312 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 TRMT11Q7Z4G4 463 aaKnown RBP8.87□□□□□ -0.99
SYNE3-205ENST00000557275 GALNT6Q8NCL4 622 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 FBXO32Q969P5 355 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 IRX2Q9BZI1 471 aaPredicted RBP8.87□□□□□ -0.99
SYNE3-205ENST00000557275 HHATLQ9HCP6 504 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 NEO1Q92859 1461 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 CENPBD1B2RD01 187 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 NR2F1P10589 423 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 CRY1Q16526 586 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 SYVN1Q86TM6 617 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 ZNF227Q86WZ6 799 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 ADGRF4Q8IZF3 695 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 ADCY4Q8NFM4 1077 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 REEP2Q9BRK0 252 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 HGH1Q9BTY7 390 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 HTATIP2Q9BUP3 242 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 SPTBN1Q01082 2364 aaKnown RBP8.87□□□□□ -0.99
SYNE3-205ENST00000557275 GMFGO60234 142 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 SLC26A2P50443 739 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 CSHL1Q14406 222 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 GRHL1Q9NZI5 618 aa8.87□□□□□ -0.99
SYNE3-205ENST00000557275 CHADO15335 359 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 ANXA5P08758 320 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 ZNF14P17017 642 aaPredicted RBP8.86□□□□□ -0.99
SYNE3-205ENST00000557275 ABL2P42684 1182 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 RAB27AP51159 221 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 GRM3Q14832 879 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 TSGA10IPQ3SY00 556 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 GTPBP2Q9BX10 602 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms