RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 APOOQ9BUR5 198 aa16.02■□□□□ 0.16
TUBB3-213ENST00000557262 PCSK1NQ9UHG2 260 aa16.02■□□□□ 0.16
TUBB3-213ENST00000557262 PADI4Q9UM07 663 aa16.02■□□□□ 0.16
TUBB3-213ENST00000557262 DOLKQ9UPQ8 538 aa16.02■□□□□ 0.16
TUBB3-213ENST00000557262 PTPRQQ9UMZ3 2332 aa16.01■□□□□ 0.15
TUBB3-213ENST00000557262 SHROOM3Q8TF72 1996 aa16.01■□□□□ 0.15
TUBB3-213ENST00000557262 CFAP69A5D8W1 941 aa16.01■□□□□ 0.15
TUBB3-213ENST00000557262 ATXN7O15265 892 aaPredicted RBP16.01■□□□□ 0.15
TUBB3-213ENST00000557262 TCEA3O75764 348 aa16.01■□□□□ 0.15
TUBB3-213ENST00000557262 RASGRP1O95267 797 aa16.01■□□□□ 0.15
TUBB3-213ENST00000557262 MBD3O95983 291 aa16.01■□□□□ 0.15
TUBB3-213ENST00000557262 FTLP02792 175 aaPredicted RBP16.01■□□□□ 0.15
TUBB3-213ENST00000557262 ALPIP09923 528 aa16.01■□□□□ 0.15
TUBB3-213ENST00000557262 GZMAP12544 262 aa16.01■□□□□ 0.15
TUBB3-213ENST00000557262 C6P13671 934 aa16.01■□□□□ 0.15
TUBB3-213ENST00000557262 ERCC2P18074 760 aa16.01■□□□□ 0.15
TUBB3-213ENST00000557262 HCAR3P49019 387 aa16.01■□□□□ 0.15
TUBB3-213ENST00000557262 LIG3P49916 1009 aa16.01■□□□□ 0.15
TUBB3-213ENST00000557262 TYRO3Q06418 890 aa16.01■□□□□ 0.15
TUBB3-213ENST00000557262 NSUN2Q08J23 767 aaKnown RBP eCLIP16.01■□□□□ 0.15
TUBB3-213ENST00000557262 AFMIDQ63HM1 303 aa16.01■□□□□ 0.15
TUBB3-213ENST00000557262 IGF2-ASQ6U949 168 aa16.01■□□□□ 0.15
TUBB3-213ENST00000557262 CRTC1Q6UUV9 634 aa16.01■□□□□ 0.15
TUBB3-213ENST00000557262 ENPP7Q6UWV6 458 aa16.01■□□□□ 0.15
TUBB3-213ENST00000557262 RBM44Q6ZP01 1051 aaKnown RBP16.01■□□□□ 0.15
TUBB3-213ENST00000557262 RFX8Q6ZV50 586 aa16.01■□□□□ 0.15
TUBB3-213ENST00000557262 TSEN2Q8NCE0 465 aaKnown RBP16.01■□□□□ 0.15
TUBB3-213ENST00000557262 LSM14AQ8ND56 463 aaKnown RBP16.01■□□□□ 0.15
TUBB3-213ENST00000557262 TSACCQ96A04 125 aaPredicted RBP16.01■□□□□ 0.15
TUBB3-213ENST00000557262 NAF1Q96HR8 494 aaKnown RBP16.01■□□□□ 0.15
TUBB3-213ENST00000557262 SNRNP25Q9BV90 132 aaKnown RBP16.01■□□□□ 0.15
TUBB3-213ENST00000557262 EDEM3Q9BZQ6 932 aa16.01■□□□□ 0.15
TUBB3-213ENST00000557262 HAUS4Q9H6D7 363 aa16.01■□□□□ 0.15
TUBB3-213ENST00000557262 ATP13A3Q9H7F0 1226 aa16.01■□□□□ 0.15
TUBB3-213ENST00000557262 AIPL1Q9NZN9 384 aa16.01■□□□□ 0.15
TUBB3-213ENST00000557262 ENTPD2Q9Y5L3 495 aa16.01■□□□□ 0.15
TUBB3-213ENST00000557262 TEX51A0A1B0GUA7 166 aa16■□□□□ 0.15
TUBB3-213ENST00000557262 LRRC53A6NM62 1247 aa16■□□□□ 0.15
TUBB3-213ENST00000557262 SMTNL1A8MU46 457 aa16■□□□□ 0.15
TUBB3-213ENST00000557262 ATMINO43313 823 aaPredicted RBP16■□□□□ 0.15
TUBB3-213ENST00000557262 PRPSAP2O60256 369 aa16■□□□□ 0.15
TUBB3-213ENST00000557262 RBMS1P29558 406 aaKnown RBP16■□□□□ 0.15
TUBB3-213ENST00000557262 SERPINA4P29622 427 aa16■□□□□ 0.15
TUBB3-213ENST00000557262 MIPP30301 263 aa16■□□□□ 0.15
TUBB3-213ENST00000557262 MMP12P39900 470 aa16■□□□□ 0.15
TUBB3-213ENST00000557262 RGRP47804 291 aa16■□□□□ 0.15
TUBB3-213ENST00000557262 ZNF135P52742 658 aaPredicted RBP16■□□□□ 0.15
TUBB3-213ENST00000557262 SRP54P61011 504 aaKnown RBP16■□□□□ 0.15
TUBB3-213ENST00000557262 POLR2LP62875 67 aaKnown RBP16■□□□□ 0.15
TUBB3-213ENST00000557262 RFTN1Q14699 578 aaPredicted RBP16■□□□□ 0.15
TUBB3-213ENST00000557262 NFATC4Q14934 902 aa16■□□□□ 0.15
TUBB3-213ENST00000557262 ASIC2Q16515 512 aa16■□□□□ 0.15
TUBB3-213ENST00000557262 ALG11Q2TAA5 492 aa16■□□□□ 0.15
TUBB3-213ENST00000557262 FILIP1LQ4L180 1135 aa16■□□□□ 0.15
TUBB3-213ENST00000557262 C3orf38Q5JPI3 329 aa16■□□□□ 0.15
TUBB3-213ENST00000557262 BROXQ5VW32 411 aa16■□□□□ 0.15
TUBB3-213ENST00000557262 RD3Q7Z3Z2 195 aa16■□□□□ 0.15
TUBB3-213ENST00000557262 ZSWIM9Q86XI8 627 aa16■□□□□ 0.15
TUBB3-213ENST00000557262 PSTKQ8IV42 348 aaKnown RBP16■□□□□ 0.15
TUBB3-213ENST00000557262 ARHGAP12Q8IWW6 846 aa16■□□□□ 0.15
TUBB3-213ENST00000557262 ATL2Q8NHH9 583 aa16■□□□□ 0.15
TUBB3-213ENST00000557262 FNIP1Q8TF40 1166 aa16■□□□□ 0.15
TUBB3-213ENST00000557262 SLC39A7Q92504 469 aa16■□□□□ 0.15
TUBB3-213ENST00000557262 ATXN7L3BQ96GX2 97 aa16■□□□□ 0.15
TUBB3-213ENST00000557262 SLC46A1Q96NT5 459 aa16■□□□□ 0.15
TUBB3-213ENST00000557262 PEBP4Q96S96 227 aa16■□□□□ 0.15
TUBB3-213ENST00000557262 KCTD15Q96SI1 283 aaPredicted RBP16■□□□□ 0.15
TUBB3-213ENST00000557262 ASCL3Q9NQ33 180 aa16■□□□□ 0.15
TUBB3-213ENST00000557262 THSD1Q9NS62 852 aa16■□□□□ 0.15
TUBB3-213ENST00000557262 GULP1Q9UBP9 304 aa16■□□□□ 0.15
TUBB3-213ENST00000557262 SATB2Q9UPW6 733 aa16■□□□□ 0.15
TUBB3-213ENST00000557262 ATP8A1Q9Y2Q0 1164 aa16■□□□□ 0.15
TUBB3-213ENST00000557262 DFFAO00273 331 aa15.99■□□□□ 0.15
TUBB3-213ENST00000557262 TNFP01375 233 aa15.99■□□□□ 0.15
TUBB3-213ENST00000557262 CELA2BP08218 269 aaPredicted RBP15.99■□□□□ 0.15
TUBB3-213ENST00000557262 PRKCIP41743 596 aa15.99■□□□□ 0.15
TUBB3-213ENST00000557262 CXADRP78310 365 aa15.99■□□□□ 0.15
TUBB3-213ENST00000557262 BCL2L1Q07817 233 aa15.99■□□□□ 0.15
TUBB3-213ENST00000557262 IL10RBQ08334 325 aa15.99■□□□□ 0.15
TUBB3-213ENST00000557262 MTM1Q13496 603 aa15.99■□□□□ 0.15
TUBB3-213ENST00000557262 ANO6Q4KMQ2 910 aa15.99■□□□□ 0.15
TUBB3-213ENST00000557262 PPP6R3Q5H9R7 873 aaPredicted RBP15.99■□□□□ 0.15
TUBB3-213ENST00000557262 ZNF571Q7Z3V5 609 aaPredicted RBP15.99■□□□□ 0.15
TUBB3-213ENST00000557262 GKN2Q86XP6 184 aa15.99■□□□□ 0.15
TUBB3-213ENST00000557262 LZTR1Q8N653 840 aa15.99■□□□□ 0.15
TUBB3-213ENST00000557262 KCNE4Q8WWG9 221 aa15.99■□□□□ 0.15
TUBB3-213ENST00000557262 WDR92Q96MX6 357 aa15.99■□□□□ 0.15
TUBB3-213ENST00000557262 CCDC3Q9BQI4 270 aa15.99■□□□□ 0.15
TUBB3-213ENST00000557262 BPIFA3Q9BQP9 254 aa15.99■□□□□ 0.15
TUBB3-213ENST00000557262 CINPQ9BW66 212 aaPredicted RBP15.99■□□□□ 0.15
TUBB3-213ENST00000557262 DPH1Q9BZG8 443 aa15.99■□□□□ 0.15
TUBB3-213ENST00000557262 SP110Q9HB58 689 aa15.99■□□□□ 0.15
TUBB3-213ENST00000557262 CNOT8Q9UFF9 292 aaKnown RBP15.99■□□□□ 0.15
TUBB3-213ENST00000557262 OR1A2Q9Y585 309 aa15.99■□□□□ 0.15
TUBB3-213ENST00000557262 PCDHGA8Q9Y5G5 932 aa15.99■□□□□ 0.15
TUBB3-213ENST00000557262 A0A1W2PNU3 283 aaPredicted RBP15.98■□□□□ 0.15
TUBB3-213ENST00000557262 A0A1W2PQC6 194 aa15.98■□□□□ 0.15
TUBB3-213ENST00000557262 PRKCGP05129 697 aa15.98■□□□□ 0.15
TUBB3-213ENST00000557262 SCNN1BP51168 640 aa15.98■□□□□ 0.15
TUBB3-213ENST00000557262 RENBPP51606 427 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms