RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 ZNF165P49910 485 aa22.77■■□□□ 1.24
ACTN1-220ENST00000556433 BLKP51451 505 aa22.77■■□□□ 1.24
ACTN1-220ENST00000556433 GABREP78334 506 aa22.77■■□□□ 1.24
ACTN1-220ENST00000556433 INPP5AQ14642 412 aa22.77■■□□□ 1.24
ACTN1-220ENST00000556433 C6orf132Q5T0Z8 1188 aa22.77■■□□□ 1.24
ACTN1-220ENST00000556433 CRTC1Q6UUV9 634 aa22.77■■□□□ 1.24
ACTN1-220ENST00000556433 ENPP7Q6UWV6 458 aa22.77■■□□□ 1.24
ACTN1-220ENST00000556433 ARHGAP36Q6ZRI8 547 aa22.77■■□□□ 1.24
ACTN1-220ENST00000556433 ZSWIM9Q86XI8 627 aa22.77■■□□□ 1.24
ACTN1-220ENST00000556433 PSTKQ8IV42 348 aaKnown RBP22.77■■□□□ 1.24
ACTN1-220ENST00000556433 SLC35F3Q8IY50 421 aa22.77■■□□□ 1.24
ACTN1-220ENST00000556433 LSMEM2Q8N112 164 aa22.77■■□□□ 1.24
ACTN1-220ENST00000556433 PAF1Q8N7H5 531 aa22.77■■□□□ 1.24
ACTN1-220ENST00000556433 TPCN2Q8NHX9 752 aa22.77■■□□□ 1.24
ACTN1-220ENST00000556433 TSACCQ96A04 125 aaPredicted RBP22.77■■□□□ 1.24
ACTN1-220ENST00000556433 ZNF578Q96N58 590 aaPredicted RBP22.77■■□□□ 1.24
ACTN1-220ENST00000556433 APOOQ9BUR5 198 aa22.77■■□□□ 1.24
ACTN1-220ENST00000556433 CINPQ9BW66 212 aaPredicted RBP22.77■■□□□ 1.24
ACTN1-220ENST00000556433 PRORYQ9H606 182 aa22.77■■□□□ 1.24
ACTN1-220ENST00000556433 MYO1AQ9UBC5 1043 aa22.77■■□□□ 1.24
ACTN1-220ENST00000556433 DOLKQ9UPQ8 538 aa22.77■■□□□ 1.24
ACTN1-220ENST00000556433 A0A1B0GTH6 734 aa22.76■■□□□ 1.23
ACTN1-220ENST00000556433 HTR1BP28222 390 aa22.76■■□□□ 1.23
ACTN1-220ENST00000556433 LSSP48449 732 aa22.76■■□□□ 1.23
ACTN1-220ENST00000556433 HCAR3P49019 387 aa22.76■■□□□ 1.23
ACTN1-220ENST00000556433 IL10RBQ08334 325 aa22.76■■□□□ 1.23
ACTN1-220ENST00000556433 ISXQ2M1V0 245 aa22.76■■□□□ 1.23
ACTN1-220ENST00000556433 PERM1Q5SV97 790 aa22.76■■□□□ 1.23
ACTN1-220ENST00000556433 CYP4V2Q6ZWL3 525 aaPredicted RBP22.76■■□□□ 1.23
ACTN1-220ENST00000556433 RD3Q7Z3Z2 195 aa22.76■■□□□ 1.23
ACTN1-220ENST00000556433 HID1Q8IV36 788 aa22.76■■□□□ 1.23
ACTN1-220ENST00000556433 FSTL5Q8N475 847 aaPredicted RBP22.76■■□□□ 1.23
ACTN1-220ENST00000556433 NPWQ8N729 165 aa22.76■■□□□ 1.23
ACTN1-220ENST00000556433 EDEM3Q9BZQ6 932 aa22.76■■□□□ 1.23
ACTN1-220ENST00000556433 POLR1BQ9H9Y6 1135 aa22.76■■□□□ 1.23
ACTN1-220ENST00000556433 CWC15Q9P013 229 aaKnown RBP22.76■■□□□ 1.23
ACTN1-220ENST00000556433 SCINQ9Y6U3 715 aa22.76■■□□□ 1.23
ACTN1-220ENST00000556433 EIF4E1BA6NMX2 242 aaKnown RBP22.75■■□□□ 1.23
ACTN1-220ENST00000556433 LRCH4O75427 683 aa22.75■■□□□ 1.23
ACTN1-220ENST00000556433 CELA2BP08218 269 aaPredicted RBP22.75■■□□□ 1.23
ACTN1-220ENST00000556433 CTSEP14091 401 aa22.75■■□□□ 1.23
ACTN1-220ENST00000556433 MMP12P39900 470 aa22.75■■□□□ 1.23
ACTN1-220ENST00000556433 ZNF135P52742 658 aaPredicted RBP22.75■■□□□ 1.23
ACTN1-220ENST00000556433 HK3P52790 923 aa22.75■■□□□ 1.23
ACTN1-220ENST00000556433 BCL2L1Q07817 233 aa22.75■■□□□ 1.23
ACTN1-220ENST00000556433 NSUN2Q08J23 767 aaKnown RBP eCLIP22.75■■□□□ 1.23
ACTN1-220ENST00000556433 RFTN1Q14699 578 aaPredicted RBP22.75■■□□□ 1.23
ACTN1-220ENST00000556433 NFATC4Q14934 902 aa22.75■■□□□ 1.23
ACTN1-220ENST00000556433 NR1I3Q14994 352 aa22.75■■□□□ 1.23
ACTN1-220ENST00000556433 ACAP1Q15027 740 aa22.75■■□□□ 1.23
ACTN1-220ENST00000556433 AGERQ15109 404 aa22.75■■□□□ 1.23
ACTN1-220ENST00000556433 ALG11Q2TAA5 492 aa22.75■■□□□ 1.23
ACTN1-220ENST00000556433 ESRP1Q6NXG1 681 aaKnown RBP22.75■■□□□ 1.23
ACTN1-220ENST00000556433 CAVIN1Q6NZI2 390 aaKnown RBP22.75■■□□□ 1.23
ACTN1-220ENST00000556433 SCG3Q8WXD2 468 aaKnown RBP22.75■■□□□ 1.23
ACTN1-220ENST00000556433 TRIM11Q96F44 468 aa22.75■■□□□ 1.23
ACTN1-220ENST00000556433 MRPL47Q9HD33 250 aaKnown RBP22.75■■□□□ 1.23
ACTN1-220ENST00000556433 GULP1Q9UBP9 304 aa22.75■■□□□ 1.23
ACTN1-220ENST00000556433 PADI4Q9UM07 663 aa22.75■■□□□ 1.23
ACTN1-220ENST00000556433 OR1A2Q9Y585 309 aa22.75■■□□□ 1.23
ACTN1-220ENST00000556433 FASNP49327 2511 aaKnown RBP22.74■■□□□ 1.23
ACTN1-220ENST00000556433 IGSF10Q6WRI0 2623 aa22.74■■□□□ 1.23
ACTN1-220ENST00000556433 RASGRP1O95267 797 aa22.74■■□□□ 1.23
ACTN1-220ENST00000556433 SERPINC1P01008 464 aa22.74■■□□□ 1.23
ACTN1-220ENST00000556433 PCCBP05166 539 aa22.74■■□□□ 1.23
ACTN1-220ENST00000556433 MYBL1P10243 752 aa22.74■■□□□ 1.23
ACTN1-220ENST00000556433 SCNN1BP51168 640 aa22.74■■□□□ 1.23
ACTN1-220ENST00000556433 DPYSQ14117 519 aa22.74■■□□□ 1.23
ACTN1-220ENST00000556433 ELOCQ15369 112 aa22.74■■□□□ 1.23
ACTN1-220ENST00000556433 TCEA2Q15560 299 aa22.74■■□□□ 1.23
ACTN1-220ENST00000556433 RBM44Q6ZP01 1051 aaKnown RBP22.74■■□□□ 1.23
ACTN1-220ENST00000556433 TP53INP2Q8IXH6 220 aa22.74■■□□□ 1.23
ACTN1-220ENST00000556433 LZTR1Q8N653 840 aa22.74■■□□□ 1.23
ACTN1-220ENST00000556433 ZNF248Q8NDW4 579 aa22.74■■□□□ 1.23
ACTN1-220ENST00000556433 ATL2Q8NHH9 583 aa22.74■■□□□ 1.23
ACTN1-220ENST00000556433 NAT6Q93015 286 aa22.74■■□□□ 1.23
ACTN1-220ENST00000556433 LGMNQ99538 433 aa22.74■■□□□ 1.23
ACTN1-220ENST00000556433 ZWILCHQ9H900 591 aa22.74■■□□□ 1.23
ACTN1-220ENST00000556433 CFAP69A5D8W1 941 aa22.73■■□□□ 1.23
ACTN1-220ENST00000556433 H3BRJ5 948 aa22.73■■□□□ 1.23
ACTN1-220ENST00000556433 DXOO77932 396 aaKnown RBP22.73■■□□□ 1.23
ACTN1-220ENST00000556433 ALPIP09923 528 aa22.73■■□□□ 1.23
ACTN1-220ENST00000556433 PCK1P35558 622 aa22.73■■□□□ 1.23
ACTN1-220ENST00000556433 PCBP4P57723 403 aaKnown RBP22.73■■□□□ 1.23
ACTN1-220ENST00000556433 SRP54P61011 504 aaKnown RBP22.73■■□□□ 1.23
ACTN1-220ENST00000556433 POLR2LP62875 67 aaKnown RBP22.73■■□□□ 1.23
ACTN1-220ENST00000556433 MTM1Q13496 603 aa22.73■■□□□ 1.23
ACTN1-220ENST00000556433 SPACA3Q8IXA5 215 aa22.73■■□□□ 1.23
ACTN1-220ENST00000556433 GRAMD1AQ96CP6 724 aa22.73■■□□□ 1.23
ACTN1-220ENST00000556433 ECHDC3Q96DC8 303 aa22.73■■□□□ 1.23
ACTN1-220ENST00000556433 ATXN7L3BQ96GX2 97 aa22.73■■□□□ 1.23
ACTN1-220ENST00000556433 NAF1Q96HR8 494 aaKnown RBP22.73■■□□□ 1.23
ACTN1-220ENST00000556433 UBL7Q96S82 380 aaPredicted RBP22.73■■□□□ 1.23
ACTN1-220ENST00000556433 ISCUQ9H1K1 167 aa22.73■■□□□ 1.23
ACTN1-220ENST00000556433 KLQ9UEF7 1012 aa22.73■■□□□ 1.23
ACTN1-220ENST00000556433 SEPT3Q9UH03 358 aa22.73■■□□□ 1.23
ACTN1-220ENST00000556433 RECQL5O94762 991 aaPredicted RBP22.72■■□□□ 1.23
ACTN1-220ENST00000556433 IL1R2P27930 398 aa22.72■■□□□ 1.23
ACTN1-220ENST00000556433 RENBPP51606 427 aa22.72■■□□□ 1.23
ACTN1-220ENST00000556433 TLE3Q04726 772 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms