RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 NAXDQ8IW45 347 aa15.3■□□□□ 0.04
ACTN1-217ENST00000556203 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.3■□□□□ 0.04
ACTN1-217ENST00000556203 LRRC57Q8N9N7 239 aa15.3■□□□□ 0.04
ACTN1-217ENST00000556203 OR13H1Q8NG92 308 aa15.3■□□□□ 0.04
ACTN1-217ENST00000556203 EXD1Q8NHP7 514 aa15.3■□□□□ 0.04
ACTN1-217ENST00000556203 ASB12Q8WXK4 309 aa15.3■□□□□ 0.04
ACTN1-217ENST00000556203 RBM41Q96IZ5 413 aaKnown RBP15.3■□□□□ 0.04
ACTN1-217ENST00000556203 BMFQ96LC9 184 aa15.3■□□□□ 0.04
ACTN1-217ENST00000556203 CAMK1GQ96NX5 476 aa15.3■□□□□ 0.04
ACTN1-217ENST00000556203 OLFM3Q96PB7 478 aa15.3■□□□□ 0.04
ACTN1-217ENST00000556203 LENG8Q96PV6 779 aaPredicted RBP15.3■□□□□ 0.04
ACTN1-217ENST00000556203 KLF6Q99612 283 aaPredicted RBP15.3■□□□□ 0.04
ACTN1-217ENST00000556203 HAUS2Q9NVX0 235 aa15.3■□□□□ 0.04
ACTN1-217ENST00000556203 ADAMTS9Q9P2N4 1935 aa15.3■□□□□ 0.04
ACTN1-217ENST00000556203 PCDHGB2Q9Y5G2 931 aa15.3■□□□□ 0.04
ACTN1-217ENST00000556203 HS3ST3A1Q9Y663 406 aa15.3■□□□□ 0.04
ACTN1-217ENST00000556203 CACNA1EQ15878 2313 aa15.29■□□□□ 0.04
ACTN1-217ENST00000556203 hCG_1818297A0A087WSY0 165 aa15.29■□□□□ 0.04
ACTN1-217ENST00000556203 A0A1W2PQ67 120 aa15.29■□□□□ 0.04
ACTN1-217ENST00000556203 POM121BA6NF01 834 aa15.29■□□□□ 0.04
ACTN1-217ENST00000556203 A6NNZ2 444 aa15.29■□□□□ 0.04
ACTN1-217ENST00000556203 FPGTO14772 594 aa15.29■□□□□ 0.04
ACTN1-217ENST00000556203 PPP1R12AO14974 1030 aaPredicted RBP15.29■□□□□ 0.04
ACTN1-217ENST00000556203 CPP00450 1065 aa15.29■□□□□ 0.04
ACTN1-217ENST00000556203 JCHAINP01591 159 aa15.29■□□□□ 0.04
ACTN1-217ENST00000556203 C6P13671 934 aa15.29■□□□□ 0.04
ACTN1-217ENST00000556203 CEACAM1P13688 526 aa15.29■□□□□ 0.04
ACTN1-217ENST00000556203 CTNNA2P26232 953 aa15.29■□□□□ 0.04
ACTN1-217ENST00000556203 ADCY2Q08462 1091 aa15.29■□□□□ 0.04
ACTN1-217ENST00000556203 RALGDSQ12967 914 aa15.29■□□□□ 0.04
ACTN1-217ENST00000556203 SUZ12Q15022 739 aaKnown RBP15.29■□□□□ 0.04
ACTN1-217ENST00000556203 SHBQ15464 509 aa15.29■□□□□ 0.04
ACTN1-217ENST00000556203 KYAT3Q6YP21 454 aaKnown RBP15.29■□□□□ 0.04
ACTN1-217ENST00000556203 Q6ZSR6 202 aa15.29■□□□□ 0.04
ACTN1-217ENST00000556203 B4GALNT4Q76KP1 1039 aa15.29■□□□□ 0.04
ACTN1-217ENST00000556203 PTAR1Q7Z6K3 402 aaPredicted RBP15.29■□□□□ 0.04
ACTN1-217ENST00000556203 DENND6BQ8NEG7 585 aa15.29■□□□□ 0.04
ACTN1-217ENST00000556203 SETD7Q8WTS6 366 aaKnown RBP15.29■□□□□ 0.04
ACTN1-217ENST00000556203 C1QTNF7Q9BXJ2 289 aa15.29■□□□□ 0.04
ACTN1-217ENST00000556203 ERVMER34-1Q9H9K5 563 aa15.29■□□□□ 0.04
ACTN1-217ENST00000556203 SAE1Q9UBE0 346 aaPredicted RBP15.29■□□□□ 0.04
ACTN1-217ENST00000556203 AMACRQ9UHK6 382 aa15.29■□□□□ 0.04
ACTN1-217ENST00000556203 COQ6Q9Y2Z9 468 aa15.29■□□□□ 0.04
ACTN1-217ENST00000556203 PCDHB9Q9Y5E1 797 aa15.29■□□□□ 0.04
ACTN1-217ENST00000556203 PCDHA3Q9Y5H8 950 aa15.29■□□□□ 0.04
ACTN1-217ENST00000556203 WDR87Q6ZQQ6 2873 aa15.29■□□□□ 0.04
ACTN1-217ENST00000556203 CCDC66A2RUB6 948 aa15.28■□□□□ 0.04
ACTN1-217ENST00000556203 A8MX80 341 aa15.28■□□□□ 0.04
ACTN1-217ENST00000556203 ARHGAP6O43182 974 aa15.28■□□□□ 0.04
ACTN1-217ENST00000556203 PCDHGA12O60330 932 aa15.28■□□□□ 0.04
ACTN1-217ENST00000556203 PGLSO95336 258 aa15.28■□□□□ 0.04
ACTN1-217ENST00000556203 PECAM1P16284 738 aaPredicted RBP15.28■□□□□ 0.04
ACTN1-217ENST00000556203 TGM2P21980 687 aa15.28■□□□□ 0.04
ACTN1-217ENST00000556203 NR2C2P49116 596 aa15.28■□□□□ 0.04
ACTN1-217ENST00000556203 ARRB1P49407 418 aaPredicted RBP15.28■□□□□ 0.04
ACTN1-217ENST00000556203 LIG3P49916 1009 aa15.28■□□□□ 0.04
ACTN1-217ENST00000556203 IFI35P80217 286 aaPredicted RBP15.28■□□□□ 0.04
ACTN1-217ENST00000556203 NIPAL4Q0D2K0 466 aa15.28■□□□□ 0.04
ACTN1-217ENST00000556203 ZBTB17Q13105 803 aa15.28■□□□□ 0.04
ACTN1-217ENST00000556203 PPP2R5EQ16537 467 aa15.28■□□□□ 0.04
ACTN1-217ENST00000556203 FAM182AQ5T1J6 154 aa15.28■□□□□ 0.04
ACTN1-217ENST00000556203 ARMC12Q5T9G4 340 aa15.28■□□□□ 0.04
ACTN1-217ENST00000556203 ALG1LQ6GMV1 187 aa15.28■□□□□ 0.04
ACTN1-217ENST00000556203 KDM7AQ6ZMT4 941 aa15.28■□□□□ 0.04
ACTN1-217ENST00000556203 DBX2Q6ZNG2 339 aa15.28■□□□□ 0.04
ACTN1-217ENST00000556203 DPPA4Q7L190 304 aa15.28■□□□□ 0.04
ACTN1-217ENST00000556203 BZW1Q7L1Q6 419 aaKnown RBP15.28■□□□□ 0.04
ACTN1-217ENST00000556203 NT5DC3Q86UY8 548 aa15.28■□□□□ 0.04
ACTN1-217ENST00000556203 SLC22A18ASQ8N1D0 253 aa15.28■□□□□ 0.04
ACTN1-217ENST00000556203 OXR1Q8N573 874 aa15.28■□□□□ 0.04
ACTN1-217ENST00000556203 CCDC112Q8NEF3 446 aa15.28■□□□□ 0.04
ACTN1-217ENST00000556203 ARRDC2Q8TBH0 407 aa15.28■□□□□ 0.04
ACTN1-217ENST00000556203 FAM174AQ8TBP5 190 aa15.28■□□□□ 0.04
ACTN1-217ENST00000556203 SPOCK2Q92563 424 aa15.28■□□□□ 0.04
ACTN1-217ENST00000556203 CENPTQ96BT3 561 aa15.28■□□□□ 0.04
ACTN1-217ENST00000556203 IL12RB2Q99665 862 aa15.28■□□□□ 0.04
ACTN1-217ENST00000556203 HEMGNQ9BXL5 484 aa15.28■□□□□ 0.04
ACTN1-217ENST00000556203 BRD8Q9H0E9 1235 aa15.28■□□□□ 0.04
ACTN1-217ENST00000556203 GRPEL1Q9HAV7 217 aa15.28■□□□□ 0.04
ACTN1-217ENST00000556203 SEPT10Q9P0V9 454 aa15.28■□□□□ 0.04
ACTN1-217ENST00000556203 B4GALT6Q9UBX8 382 aa15.28■□□□□ 0.04
ACTN1-217ENST00000556203 RAI2Q9Y5P3 530 aa15.28■□□□□ 0.04
ACTN1-217ENST00000556203 ADGRG1Q9Y653 693 aa15.28■□□□□ 0.04
ACTN1-217ENST00000556203 SPAARA0A1B0GVQ0 90 aa15.27■□□□□ 0.04
ACTN1-217ENST00000556203 YKT6O15498 198 aa15.27■□□□□ 0.04
ACTN1-217ENST00000556203 FLRT2O43155 660 aa15.27■□□□□ 0.04
ACTN1-217ENST00000556203 LZTS3O60299 673 aaPredicted RBP15.27■□□□□ 0.04
ACTN1-217ENST00000556203 CES1P23141 567 aa15.27■□□□□ 0.04
ACTN1-217ENST00000556203 IGFALSP35858 605 aa15.27■□□□□ 0.04
ACTN1-217ENST00000556203 RABIFP47224 123 aa15.27■□□□□ 0.04
ACTN1-217ENST00000556203 RXRGP48443 463 aa15.27■□□□□ 0.04
ACTN1-217ENST00000556203 RWDD2BP57060 319 aa15.27■□□□□ 0.04
ACTN1-217ENST00000556203 IHHQ14623 411 aa15.27■□□□□ 0.04
ACTN1-217ENST00000556203 IRF4Q15306 451 aa15.27■□□□□ 0.04
ACTN1-217ENST00000556203 N4BP2L1Q5TBK1 243 aaPredicted RBP15.27■□□□□ 0.04
ACTN1-217ENST00000556203 PEX26Q7Z412 305 aa15.27■□□□□ 0.04
ACTN1-217ENST00000556203 GATAD2AQ86YP4 633 aa15.27■□□□□ 0.04
ACTN1-217ENST00000556203 SYCE1Q8N0S2 351 aa15.27■□□□□ 0.04
ACTN1-217ENST00000556203 CNTD1Q8N815 330 aa15.27■□□□□ 0.04
ACTN1-217ENST00000556203 TP53I13Q8NBR0 393 aaPredicted RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms