RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 AUHQ13825 339 aaKnown RBP6.94□□□□□ -1.3
SLIRP-204ENST00000555890 PRKD1Q15139 912 aaPredicted RBP6.94□□□□□ -1.3
SLIRP-204ENST00000555890 TCEA2Q15560 299 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 LONRF1Q17RB8 773 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 PARP6Q2NL67 630 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 KLHL38Q2WGJ6 581 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 CCDC38Q502W7 563 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 ANKRD20A2Q5SQ80 823 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 ANKRD20A1Q5TYW2 823 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 SDHAF4Q5VUM1 108 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 ANKRD20A3Q5VUR7 823 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 ANKRD22Q5VYY1 191 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 PLPP4Q5VZY2 271 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 TPGS2Q68CL5 300 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 ITPRIPL1Q6GPH6 555 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 SLC8B1Q6J4K2 584 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 RWDD4Q6NW29 188 aaKnown RBP6.94□□□□□ -1.3
SLIRP-204ENST00000555890 TSSK4Q6SA08 328 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 PRSS55Q6UWB4 352 aaPredicted RBP6.94□□□□□ -1.3
SLIRP-204ENST00000555890 LRRC31Q6UY01 552 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 RAB44Q7Z6P3 723 aaPredicted RBP6.94□□□□□ -1.3
SLIRP-204ENST00000555890 TADA2BQ86TJ2 420 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 SULF2Q8IWU5 870 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 MMP21Q8N119 569 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 CHCHD4Q8N4Q1 142 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 ATP6V0D2Q8N8Y2 350 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 PDZD8Q8NEN9 1154 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 CCDC110Q8TBZ0 833 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 CASP10Q92851 521 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 IRF7Q92985 503 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 TLCD1Q96CP7 247 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 LRRC39Q96DD0 335 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 TBC1D31Q96DN5 1066 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 P2RY11Q96G91 374 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 TMEM169Q96HH4 297 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 B3GALT6Q96L58 329 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 C1orf74Q96LT6 269 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 FCRL3Q96P31 734 aaPredicted RBP6.94□□□□□ -1.3
SLIRP-204ENST00000555890 VAT1Q99536 393 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 SIK2Q9H0K1 926 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 KCNK12Q9HB15 430 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 NMUR1Q9HB89 426 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 XAB2Q9HCS7 855 aaKnown RBP6.94□□□□□ -1.3
SLIRP-204ENST00000555890 SPG21Q9NZD8 308 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 GMIPQ9P107 970 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 FNIP2Q9P278 1114 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 HSFX1Q9UBD0 423 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 DKK4Q9UBT3 224 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 STK39Q9UEW8 545 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 FETUBQ9UGM5 382 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 AFF4Q9UHB7 1163 aaKnown RBP6.94□□□□□ -1.3
SLIRP-204ENST00000555890 SFMBT1Q9UHJ3 866 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 SLC24A2Q9UI40 661 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 TRHDEQ9UKU6 1024 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 MAN2B2Q9Y2E5 1009 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 PCDHB14Q9Y5E9 798 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 CDY1Q9Y6F8 540 aa6.94□□□□□ -1.3
SLIRP-204ENST00000555890 MYO18AQ92614 2054 aaKnown RBP6.94□□□□□ -1.3
SLIRP-204ENST00000555890 C2orf16Q68DN1 1984 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 ATMQ13315 3056 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 FAM72CH0Y354 149 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 J3QW42 95 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 RNF103O00237 685 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 SHOX2O60902 331 aaPredicted RBP6.93□□□□□ -1.3
SLIRP-204ENST00000555890 CLASP2O75122 1294 aaKnown RBP6.93□□□□□ -1.3
SLIRP-204ENST00000555890 TMEM63AO94886 807 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 LRIG2O94898 1065 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 METTL18O95568 372 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 EFEMP2O95967 443 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 SOD2P04179 222 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 S100BP04271 92 aaPredicted RBP6.93□□□□□ -1.3
SLIRP-204ENST00000555890 APRTP07741 180 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 MLNP12872 115 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 VAV1P15498 845 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 PPM1AP35813 382 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 PBX3P40426 434 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 MDH1P40925 334 aaKnown RBP6.93□□□□□ -1.3
SLIRP-204ENST00000555890 MTHFRP42898 656 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 IRAK1P51617 712 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 MLLT6P55198 1093 aaPredicted RBP6.93□□□□□ -1.3
SLIRP-204ENST00000555890 CREMQ03060 361 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 PPIDQ08752 370 aaKnown RBP6.93□□□□□ -1.3
SLIRP-204ENST00000555890 GALNT2Q10471 571 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 EFEMP1Q12805 493 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 TAF10Q12962 218 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 SEMA5AQ13591 1074 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 PRPSAP1Q14558 356 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 RASA2Q15283 850 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 TAF12Q16514 161 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 C10orf120Q5SQS8 335 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 HP1BP3Q5SSJ5 553 aaPredicted RBP6.93□□□□□ -1.3
SLIRP-204ENST00000555890 FNBP1LQ5T0N5 605 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 FAM72AQ5TYM5 149 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 FAM72DQ6L9T8 149 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 C3orf62Q6ZUJ4 267 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 TAS1R1Q7RTX1 841 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 PID1Q7Z2X4 250 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 TRIM46Q7Z4K8 759 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 DDX53Q86TM3 631 aaKnown RBP6.93□□□□□ -1.3
SLIRP-204ENST00000555890 FAM72BQ86X60 149 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms