RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 CFAP58Q5T655 872 aa12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 E4F1Q66K89 784 aaPredicted RBP12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 KDM7AQ6ZMT4 941 aa12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 TSEN2Q8NCE0 465 aaKnown RBP12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 MAPK15Q8TD08 544 aa12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 SYN2Q92777 582 aaPredicted RBP12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 IQCDQ96DY2 449 aa12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 HIC2Q96JB3 615 aa12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 PSKH2Q96QS6 385 aa12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 KCTD15Q96SI1 283 aaPredicted RBP12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 WRAP53Q9BUR4 548 aaKnown RBP12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 ZWILCHQ9H900 591 aa12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 POLR1BQ9H9Y6 1135 aa12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 CNOT8Q9UFF9 292 aaKnown RBP12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 PNMA8BQ9ULN7 279 aaPredicted RBP12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 BZW2Q9Y6E2 419 aaKnown RBP12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 A0A1W2PQJ5 194 aa12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 TMCO5BA8MYB1 307 aa12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 TRAFD1O14545 582 aaPredicted RBP12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 YY2O15391 372 aa12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 ATMINO43313 823 aaPredicted RBP12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 CSO75390 466 aaKnown RBP12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 ANXA6P08133 673 aa12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 HOXC4P09017 264 aaPredicted RBP12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 HSPA9P38646 679 aaKnown RBP12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 MLLT3P42568 568 aaPredicted RBP12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 LIG3P49916 1009 aa12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 AP1S1P61966 158 aa12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 NFATC4Q14934 902 aa12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 NR1I3Q14994 352 aa12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 IQCB1Q15051 598 aa12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 CDKN3Q16667 212 aa12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 ISXQ2M1V0 245 aa12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 BOLA3Q53S33 107 aa12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 GUSBP11Q6P575 273 aa12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 SRLQ86TD4 932 aa12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 RBFAQ8N0V3 343 aa12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 NPWQ8N729 165 aa12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 NIPA2Q8N8Q9 360 aa12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 LSM14AQ8ND56 463 aaKnown RBP12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 ZNF248Q8NDW4 579 aa12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 SCG3Q8WXD2 468 aaKnown RBP12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 ZNF653Q96CK0 615 aa12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 CELF6Q96J87 481 aaKnown RBP12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 NAP1L5Q96NT1 182 aaPredicted RBP12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 DCBLD2Q96PD2 775 aa12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 FUCA2Q9BTY2 467 aa12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 CINPQ9BW66 212 aaPredicted RBP12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 CLPBQ9H078 707 aa12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 PRORYQ9H606 182 aa12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 CAAP1Q9H8G2 361 aa12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 SP110Q9HB58 689 aa12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 GPATCH2LQ9NWQ4 482 aa12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 KCTD5Q9NXV2 234 aa12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 CWC15Q9P013 229 aaKnown RBP12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 SEPT3Q9UH03 358 aa12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 PCSK1NQ9UHG2 260 aa12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 PCDHB1Q9Y5F3 818 aa12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 PCDHGA8Q9Y5G5 932 aa12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 DGKBQ9Y6T7 804 aa12.79□□□□□ -0.36
HNRNPC-221ENST00000555883 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.78□□□□□ -0.36
HNRNPC-221ENST00000555883 H3BRJ5 948 aa12.78□□□□□ -0.36
HNRNPC-221ENST00000555883 TK2O00142 265 aa12.78□□□□□ -0.36
HNRNPC-221ENST00000555883 HAX1O00165 279 aa12.78□□□□□ -0.36
HNRNPC-221ENST00000555883 SOCS5O75159 536 aa12.78□□□□□ -0.36
HNRNPC-221ENST00000555883 USP12O75317 370 aa12.78□□□□□ -0.36
HNRNPC-221ENST00000555883 RASGRP1O95267 797 aa12.78□□□□□ -0.36
HNRNPC-221ENST00000555883 TSHRP16473 764 aa12.78□□□□□ -0.36
HNRNPC-221ENST00000555883 ITIH2P19823 946 aa12.78□□□□□ -0.36
HNRNPC-221ENST00000555883 TGM2P21980 687 aa12.78□□□□□ -0.36
HNRNPC-221ENST00000555883 RGRP47804 291 aa12.78□□□□□ -0.36
HNRNPC-221ENST00000555883 ADKP55263 362 aaKnown RBP12.78□□□□□ -0.36
HNRNPC-221ENST00000555883 PCBP4P57723 403 aaKnown RBP12.78□□□□□ -0.36
HNRNPC-221ENST00000555883 KIAA1024LP59773 190 aa12.78□□□□□ -0.36
HNRNPC-221ENST00000555883 BCL2L1Q07817 233 aa12.78□□□□□ -0.36
HNRNPC-221ENST00000555883 PIGHQ14442 188 aaPredicted RBP12.78□□□□□ -0.36
HNRNPC-221ENST00000555883 INPP5AQ14642 412 aa12.78□□□□□ -0.36
HNRNPC-221ENST00000555883 PPP6R3Q5H9R7 873 aaPredicted RBP12.78□□□□□ -0.36
HNRNPC-221ENST00000555883 RALGPS1Q5JS13 557 aa12.78□□□□□ -0.36
HNRNPC-221ENST00000555883 FAXCQ5TGI0 409 aa12.78□□□□□ -0.36
HNRNPC-221ENST00000555883 ESRP1Q6NXG1 681 aaKnown RBP12.78□□□□□ -0.36
HNRNPC-221ENST00000555883 RBM44Q6ZP01 1051 aaKnown RBP12.78□□□□□ -0.36
HNRNPC-221ENST00000555883 DPPA4Q7L190 304 aa12.78□□□□□ -0.36
HNRNPC-221ENST00000555883 EFL1Q7Z2Z2 1120 aaKnown RBP12.78□□□□□ -0.36
HNRNPC-221ENST00000555883 ZSWIM9Q86XI8 627 aa12.78□□□□□ -0.36
HNRNPC-221ENST00000555883 CAMK1DQ8IU85 385 aa12.78□□□□□ -0.36
HNRNPC-221ENST00000555883 SLC35F3Q8IY50 421 aa12.78□□□□□ -0.36
HNRNPC-221ENST00000555883 ARL10Q8N8L6 244 aa12.78□□□□□ -0.36
HNRNPC-221ENST00000555883 NETO2Q8NC67 525 aa12.78□□□□□ -0.36
HNRNPC-221ENST00000555883 OR6C4Q8NGE1 309 aa12.78□□□□□ -0.36
HNRNPC-221ENST00000555883 UBL7Q96S82 380 aaPredicted RBP12.78□□□□□ -0.36
HNRNPC-221ENST00000555883 APOOQ9BUR5 198 aa12.78□□□□□ -0.36
HNRNPC-221ENST00000555883 TRIM7Q9C029 511 aa12.78□□□□□ -0.36
HNRNPC-221ENST00000555883 TCEAL2Q9H3H9 227 aaPredicted RBP12.78□□□□□ -0.36
HNRNPC-221ENST00000555883 KALRNO60229 2985 aa12.78□□□□□ -0.36
HNRNPC-221ENST00000555883 CPED1A4D0V7 1026 aa12.77□□□□□ -0.37
HNRNPC-221ENST00000555883 DFFAO00273 331 aa12.77□□□□□ -0.37
HNRNPC-221ENST00000555883 TNFRSF10CO14798 259 aa12.77□□□□□ -0.37
HNRNPC-221ENST00000555883 HTRA2O43464 458 aaPredicted RBP12.77□□□□□ -0.37
HNRNPC-221ENST00000555883 SERPINC1P01008 464 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms