RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 ARL5AQ9Y689 179 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 WASF2Q9Y6W5 498 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 A0A087WUV0 522 aaPredicted RBP10.27□□□□□ -0.77
SRP54-208ENST00000555557 TLDC2A0PJX2 215 aa10.27□□□□□ -0.77
SRP54-208ENST00000555557 A8MX80 341 aa10.27□□□□□ -0.77
SRP54-208ENST00000555557 ATP8B1O43520 1251 aa10.27□□□□□ -0.77
SRP54-208ENST00000555557 SIN3BO75182 1162 aa10.27□□□□□ -0.77
SRP54-208ENST00000555557 EPHX1P07099 455 aa10.27□□□□□ -0.77
SRP54-208ENST00000555557 ALPIP09923 528 aa10.27□□□□□ -0.77
SRP54-208ENST00000555557 ADRA1DP25100 572 aa10.27□□□□□ -0.77
SRP54-208ENST00000555557 SERPINA4P29622 427 aa10.27□□□□□ -0.77
SRP54-208ENST00000555557 KIR2DL1P43626 348 aaPredicted RBP10.27□□□□□ -0.77
SRP54-208ENST00000555557 RAD51Q06609 339 aa10.27□□□□□ -0.77
SRP54-208ENST00000555557 CRYMQ14894 314 aa10.27□□□□□ -0.77
SRP54-208ENST00000555557 HNRNPA1L2Q32P51 320 aaKnown RBP10.27□□□□□ -0.77
SRP54-208ENST00000555557 PUS10Q3MIT2 529 aaKnown RBP10.27□□□□□ -0.77
SRP54-208ENST00000555557 ANKRD20A4Q4UJ75 823 aa10.27□□□□□ -0.77
SRP54-208ENST00000555557 SLC44A4Q53GD3 710 aa10.27□□□□□ -0.77
SRP54-208ENST00000555557 C2orf27AQ580R0 203 aa10.27□□□□□ -0.77
SRP54-208ENST00000555557 LRRC73Q5JTD7 316 aa10.27□□□□□ -0.77
SRP54-208ENST00000555557 C9orf64Q5T6V5 341 aa10.27□□□□□ -0.77
SRP54-208ENST00000555557 FSTL4Q6MZW2 842 aa10.27□□□□□ -0.77
SRP54-208ENST00000555557 ESRP1Q6NXG1 681 aaKnown RBP10.27□□□□□ -0.77
SRP54-208ENST00000555557 PKN3Q6P5Z2 889 aa10.27□□□□□ -0.77
SRP54-208ENST00000555557 GDPD4Q6W3E5 623 aa10.27□□□□□ -0.77
SRP54-208ENST00000555557 NUDT18Q6ZVK8 323 aa10.27□□□□□ -0.77
SRP54-208ENST00000555557 TMEM135Q86UB9 458 aa10.27□□□□□ -0.77
SRP54-208ENST00000555557 RALGPS2Q86X27 583 aaPredicted RBP10.27□□□□□ -0.77
SRP54-208ENST00000555557 PLPP6Q8IY26 295 aa10.27□□□□□ -0.77
SRP54-208ENST00000555557 CHPFQ8IZ52 775 aa10.27□□□□□ -0.77
SRP54-208ENST00000555557 ZNF513Q8N8E2 541 aaPredicted RBP10.27□□□□□ -0.77
SRP54-208ENST00000555557 PPHLN1Q8NEY8 458 aaKnown RBP10.27□□□□□ -0.77
SRP54-208ENST00000555557 MDGA1Q8NFP4 955 aa10.27□□□□□ -0.77
SRP54-208ENST00000555557 GSDMBQ8TAX9 411 aa10.27□□□□□ -0.77
SRP54-208ENST00000555557 EPS8L3Q8TE67 593 aaKnown RBP10.27□□□□□ -0.77
SRP54-208ENST00000555557 ZNF669Q96BR6 464 aaPredicted RBP10.27□□□□□ -0.77
SRP54-208ENST00000555557 KLHL32Q96NJ5 620 aa10.27□□□□□ -0.77
SRP54-208ENST00000555557 KIFC1Q9BW19 673 aa10.27□□□□□ -0.77
SRP54-208ENST00000555557 CPEB1Q9BZB8 566 aaKnown RBP10.27□□□□□ -0.77
SRP54-208ENST00000555557 IL36AQ9UHA7 158 aa10.27□□□□□ -0.77
SRP54-208ENST00000555557 FAM50BQ9Y247 325 aa10.27□□□□□ -0.77
SRP54-208ENST00000555557 STARD13Q9Y3M8 1113 aa10.27□□□□□ -0.77
SRP54-208ENST00000555557 TCAF1Q9Y4C2 921 aa10.27□□□□□ -0.77
SRP54-208ENST00000555557 CUL9Q8IWT3 2517 aa10.26□□□□□ -0.77
SRP54-208ENST00000555557 ZCWPW2A0A1B0GU75 182 aa10.26□□□□□ -0.77
SRP54-208ENST00000555557 FAM237BA0A1B0GVD1 139 aa10.26□□□□□ -0.77
SRP54-208ENST00000555557 MAGEB16A2A368 324 aa10.26□□□□□ -0.77
SRP54-208ENST00000555557 SHISA7A6NL88 538 aa10.26□□□□□ -0.77
SRP54-208ENST00000555557 CXorf49A8MYA2 514 aaPredicted RBP10.26□□□□□ -0.77
SRP54-208ENST00000555557 GOLGA8KD6RF30 607 aa10.26□□□□□ -0.77
SRP54-208ENST00000555557 POC1B-GALNT4F8VUJ3 575 aa10.26□□□□□ -0.77
SRP54-208ENST00000555557 GOLGA8TH3BQL2 631 aa10.26□□□□□ -0.77
SRP54-208ENST00000555557 CCL22O00626 93 aa10.26□□□□□ -0.77
SRP54-208ENST00000555557 SOCS5O75159 536 aa10.26□□□□□ -0.77
SRP54-208ENST00000555557 SLC4A1P02730 911 aa10.26□□□□□ -0.77
SRP54-208ENST00000555557 POLBP06746 335 aa10.26□□□□□ -0.77
SRP54-208ENST00000555557 ABHD2P08910 425 aa10.26□□□□□ -0.77
SRP54-208ENST00000555557 SRFP11831 508 aa10.26□□□□□ -0.77
SRP54-208ENST00000555557 ALADP13716 330 aa10.26□□□□□ -0.77
SRP54-208ENST00000555557 CA4P22748 312 aa10.26□□□□□ -0.77
SRP54-208ENST00000555557 PHBP35232 272 aa10.26□□□□□ -0.77
SRP54-208ENST00000555557 METAP1P53582 386 aa10.26□□□□□ -0.77
SRP54-208ENST00000555557 CNGA3Q16281 694 aa10.26□□□□□ -0.77
SRP54-208ENST00000555557 SKIDA1Q1XH10 827 aa10.26□□□□□ -0.77
SRP54-208ENST00000555557 KBTBD12Q3ZCT8 623 aa10.26□□□□□ -0.77
SRP54-208ENST00000555557 TMEM196Q5HYL7 178 aa10.26□□□□□ -0.77
SRP54-208ENST00000555557 STEAP4Q687X5 459 aa10.26□□□□□ -0.77
SRP54-208ENST00000555557 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.26□□□□□ -0.77
SRP54-208ENST00000555557 DNASE1L2Q92874 299 aa10.26□□□□□ -0.77
SRP54-208ENST00000555557 TUBGCP5Q96RT8 1024 aa10.26□□□□□ -0.77
SRP54-208ENST00000555557 RUFY1Q96T51 708 aa10.26□□□□□ -0.77
SRP54-208ENST00000555557 C8orf33Q9H7E9 229 aaPredicted RBP10.26□□□□□ -0.77
SRP54-208ENST00000555557 PPANQ9NQ55 473 aaKnown RBP10.26□□□□□ -0.77
SRP54-208ENST00000555557 SMYD2Q9NRG4 433 aa10.26□□□□□ -0.77
SRP54-208ENST00000555557 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.26□□□□□ -0.77
SRP54-208ENST00000555557 SLC17A6Q9P2U8 582 aa10.26□□□□□ -0.77
SRP54-208ENST00000555557 SARDHQ9UL12 918 aa10.26□□□□□ -0.77
SRP54-208ENST00000555557 STON1Q9Y6Q2 735 aa10.26□□□□□ -0.77
SRP54-208ENST00000555557 EDDM13A0A1B0GTR0 161 aa10.25□□□□□ -0.77
SRP54-208ENST00000555557 EXOC1LA0A1B0GW35 172 aa10.25□□□□□ -0.77
SRP54-208ENST00000555557 HEATR9A2RTY3 570 aa10.25□□□□□ -0.77
SRP54-208ENST00000555557 DLL1O00548 723 aa10.25□□□□□ -0.77
SRP54-208ENST00000555557 LDB2O43679 373 aa10.25□□□□□ -0.77
SRP54-208ENST00000555557 USP1O94782 785 aa10.25□□□□□ -0.77
SRP54-208ENST00000555557 C1QAP02745 245 aa10.25□□□□□ -0.77
SRP54-208ENST00000555557 F7P08709 466 aaPredicted RBP10.25□□□□□ -0.77
SRP54-208ENST00000555557 ERVK-10P10266 1014 aa10.25□□□□□ -0.77
SRP54-208ENST00000555557 TNFRSF4P43489 277 aa10.25□□□□□ -0.77
SRP54-208ENST00000555557 TMPRSS15P98073 1019 aa10.25□□□□□ -0.77
SRP54-208ENST00000555557 PFKPQ01813 784 aa10.25□□□□□ -0.77
SRP54-208ENST00000555557 ZP2Q05996 745 aa10.25□□□□□ -0.77
SRP54-208ENST00000555557 GRSF1Q12849 480 aaKnown RBP eCLIP10.25□□□□□ -0.77
SRP54-208ENST00000555557 TPRG1Q6ZUI0 275 aa10.25□□□□□ -0.77
SRP54-208ENST00000555557 GLT6D1Q7Z4J2 308 aa10.25□□□□□ -0.77
SRP54-208ENST00000555557 CCNJLQ8IV13 435 aa10.25□□□□□ -0.77
SRP54-208ENST00000555557 ADHFE1Q8IWW8 467 aa10.25□□□□□ -0.77
SRP54-208ENST00000555557 KDM1BQ8NB78 822 aa10.25□□□□□ -0.77
SRP54-208ENST00000555557 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.25□□□□□ -0.77
SRP54-208ENST00000555557 BRSK1Q8TDC3 778 aa10.25□□□□□ -0.77
SRP54-208ENST00000555557 ECHDC3Q96DC8 303 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms