RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 LBHD1Q9BQE6 289 aaPredicted RBP24.42■■□□□ 1.5
TMEM260-207ENST00000555497 THTPAQ9BU02 230 aa24.42■■□□□ 1.5
TMEM260-207ENST00000555497 C1orf21Q9H246 121 aa24.42■■□□□ 1.5
TMEM260-207ENST00000555497 AFF4Q9UHB7 1163 aaKnown RBP24.42■■□□□ 1.5
TMEM260-207ENST00000555497 DCXO43602 365 aa24.41■■□□□ 1.5
TMEM260-207ENST00000555497 CD1EP15812 388 aa24.41■■□□□ 1.5
TMEM260-207ENST00000555497 TFEBP19484 476 aa24.41■■□□□ 1.5
TMEM260-207ENST00000555497 CDKN2DP55273 166 aa24.41■■□□□ 1.5
TMEM260-207ENST00000555497 PRAMEP78395 509 aa24.41■■□□□ 1.5
TMEM260-207ENST00000555497 HTRA3P83110 453 aa24.41■■□□□ 1.5
TMEM260-207ENST00000555497 SLC25A3Q00325 362 aa24.41■■□□□ 1.5
TMEM260-207ENST00000555497 MTA1Q13330 715 aa24.41■■□□□ 1.5
TMEM260-207ENST00000555497 ARHGEF6Q15052 776 aa24.41■■□□□ 1.5
TMEM260-207ENST00000555497 ALG1LQ6GMV1 187 aa24.41■■□□□ 1.5
TMEM260-207ENST00000555497 KIAA1841Q6NSI8 718 aa24.41■■□□□ 1.5
TMEM260-207ENST00000555497 ANKRD49Q8WVL7 239 aa24.41■■□□□ 1.5
TMEM260-207ENST00000555497 ZNF599Q96NL3 588 aa24.41■■□□□ 1.5
TMEM260-207ENST00000555497 DCLRE1BQ9H816 532 aa24.41■■□□□ 1.5
TMEM260-207ENST00000555497 KRT36O76013 467 aa24.41■■□□□ 1.5
TMEM260-207ENST00000555497 TM7SF2O76062 418 aa24.41■■□□□ 1.5
TMEM260-207ENST00000555497 CORO1AP31146 461 aaKnown RBP24.41■■□□□ 1.5
TMEM260-207ENST00000555497 CDH4P55283 916 aa24.41■■□□□ 1.5
TMEM260-207ENST00000555497 MXRA7P84157 204 aa24.41■■□□□ 1.5
TMEM260-207ENST00000555497 ACVR1Q04771 509 aa24.41■■□□□ 1.5
TMEM260-207ENST00000555497 TLDC1Q6P9B6 456 aa24.41■■□□□ 1.5
TMEM260-207ENST00000555497 TMEM207Q6UWW9 146 aa24.41■■□□□ 1.5
TMEM260-207ENST00000555497 TMCO2Q7Z6W1 182 aaPredicted RBP24.41■■□□□ 1.5
TMEM260-207ENST00000555497 SCUBE1Q8IWY4 988 aa24.41■■□□□ 1.5
TMEM260-207ENST00000555497 PDZD8Q8NEN9 1154 aa24.41■■□□□ 1.5
TMEM260-207ENST00000555497 OVCA2Q8WZ82 227 aa24.41■■□□□ 1.5
TMEM260-207ENST00000555497 TRIB3Q96RU7 358 aa24.41■■□□□ 1.5
TMEM260-207ENST00000555497 MGME1Q9BQP7 344 aa24.41■■□□□ 1.5
TMEM260-207ENST00000555497 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP24.41■■□□□ 1.5
TMEM260-207ENST00000555497 OGDHLQ9ULD0 1010 aa24.41■■□□□ 1.5
TMEM260-207ENST00000555497 ANAPC1Q9H1A4 1944 aa24.4■■□□□ 1.5
TMEM260-207ENST00000555497 ABLIM3O94929 683 aa24.4■■□□□ 1.5
TMEM260-207ENST00000555497 JUNP05412 331 aaKnown RBP24.4■■□□□ 1.5
TMEM260-207ENST00000555497 HLA-DPA1P20036 260 aa24.4■■□□□ 1.5
TMEM260-207ENST00000555497 KCNA5P22460 613 aa24.4■■□□□ 1.5
TMEM260-207ENST00000555497 APLP1P51693 650 aa24.4■■□□□ 1.5
TMEM260-207ENST00000555497 CCNG1P51959 295 aa24.4■■□□□ 1.5
TMEM260-207ENST00000555497 SLC14A2Q15849 920 aa24.4■■□□□ 1.5
TMEM260-207ENST00000555497 TECRLQ5HYJ1 363 aa24.4■■□□□ 1.5
TMEM260-207ENST00000555497 KLHDC10Q6PID8 442 aa24.4■■□□□ 1.5
TMEM260-207ENST00000555497 GALNT7Q86SF2 657 aa24.4■■□□□ 1.5
TMEM260-207ENST00000555497 ULK2Q8IYT8 1036 aa24.4■■□□□ 1.5
TMEM260-207ENST00000555497 CCNYL1Q8N7R7 359 aa24.4■■□□□ 1.5
TMEM260-207ENST00000555497 OR13C4Q8NGS5 318 aa24.4■■□□□ 1.5
TMEM260-207ENST00000555497 CEP295NLQ96MC4 621 aa24.4■■□□□ 1.5
TMEM260-207ENST00000555497 C2orf78A6NCI8 922 aa24.39■■□□□ 1.5
TMEM260-207ENST00000555497 HDAC3O15379 428 aa24.39■■□□□ 1.5
TMEM260-207ENST00000555497 EPOP01588 193 aa24.39■■□□□ 1.5
TMEM260-207ENST00000555497 FGF1P05230 155 aa24.39■■□□□ 1.5
TMEM260-207ENST00000555497 RPSAP08865 295 aaKnown RBP24.39■■□□□ 1.5
TMEM260-207ENST00000555497 CCDC166P0CW27 439 aa24.39■■□□□ 1.5
TMEM260-207ENST00000555497 PRKAA1Q13131 559 aa24.39■■□□□ 1.5
TMEM260-207ENST00000555497 PEX6Q13608 980 aa24.39■■□□□ 1.5
TMEM260-207ENST00000555497 DNAL1Q4LDG9 190 aa24.39■■□□□ 1.5
TMEM260-207ENST00000555497 ANKRD33Q7Z3H0 272 aa24.39■■□□□ 1.5
TMEM260-207ENST00000555497 ARHGAP24Q8N264 748 aa24.39■■□□□ 1.5
TMEM260-207ENST00000555497 ZNF461Q8TAF7 563 aa24.39■■□□□ 1.5
TMEM260-207ENST00000555497 CYP4F11Q9HBI6 524 aa24.39■■□□□ 1.5
TMEM260-207ENST00000555497 TCF7L2Q9NQB0 619 aa24.39■■□□□ 1.5
TMEM260-207ENST00000555497 VWA7Q9Y334 891 aa24.39■■□□□ 1.5
TMEM260-207ENST00000555497 NEMP1O14524 444 aa24.39■■□□□ 1.49
TMEM260-207ENST00000555497 TSPAN3O60637 253 aa24.39■■□□□ 1.49
TMEM260-207ENST00000555497 WISP3O95389 354 aaPredicted RBP24.39■■□□□ 1.49
TMEM260-207ENST00000555497 GOT2P00505 430 aaKnown RBP24.39■■□□□ 1.49
TMEM260-207ENST00000555497 SERPINF2P08697 491 aa24.39■■□□□ 1.49
TMEM260-207ENST00000555497 IRF1P10914 325 aa24.39■■□□□ 1.49
TMEM260-207ENST00000555497 TLE2Q04725 743 aa24.39■■□□□ 1.49
TMEM260-207ENST00000555497 SEMA3AQ14563 771 aa24.39■■□□□ 1.49
TMEM260-207ENST00000555497 SLC39A5Q6ZMH5 540 aa24.39■■□□□ 1.49
TMEM260-207ENST00000555497 EXOC2Q96KP1 924 aa24.39■■□□□ 1.49
TMEM260-207ENST00000555497 UBXN10Q96LJ8 280 aa24.39■■□□□ 1.49
TMEM260-207ENST00000555497 POMKQ9H5K3 350 aa24.39■■□□□ 1.49
TMEM260-207ENST00000555497 GPAMQ9HCL2 828 aa24.39■■□□□ 1.49
TMEM260-207ENST00000555497 CRYL1Q9Y2S2 319 aa24.39■■□□□ 1.49
TMEM260-207ENST00000555497 CCDC162PA2VCL2 907 aa24.38■■□□□ 1.49
TMEM260-207ENST00000555497 KDELR3O43731 214 aa24.38■■□□□ 1.49
TMEM260-207ENST00000555497 EPHA3P29320 983 aa24.38■■□□□ 1.49
TMEM260-207ENST00000555497 PLD1Q13393 1074 aa24.38■■□□□ 1.49
TMEM260-207ENST00000555497 NAA25Q14CX7 972 aa24.38■■□□□ 1.49
TMEM260-207ENST00000555497 RALGPS1Q5JS13 557 aa24.38■■□□□ 1.49
TMEM260-207ENST00000555497 SEL1L3Q68CR1 1132 aa24.38■■□□□ 1.49
TMEM260-207ENST00000555497 FAM43BQ6ZT52 329 aaPredicted RBP24.38■■□□□ 1.49
TMEM260-207ENST00000555497 PIM3Q86V86 326 aa24.38■■□□□ 1.49
TMEM260-207ENST00000555497 PLD4Q96BZ4 506 aa24.38■■□□□ 1.49
TMEM260-207ENST00000555497 PSKH2Q96QS6 385 aa24.38■■□□□ 1.49
TMEM260-207ENST00000555497 NUF2Q9BZD4 464 aa24.38■■□□□ 1.49
TMEM260-207ENST00000555497 UBA2Q9UBT2 640 aaPredicted RBP24.38■■□□□ 1.49
TMEM260-207ENST00000555497 SLC7A8Q9UHI5 535 aa24.38■■□□□ 1.49
TMEM260-207ENST00000555497 AGO1Q9UL18 857 aaKnown RBP24.38■■□□□ 1.49
TMEM260-207ENST00000555497 A0A088AWK7 358 aa24.38■■□□□ 1.49
TMEM260-207ENST00000555497 LOC100653049A0A140TA62 436 aa24.38■■□□□ 1.49
TMEM260-207ENST00000555497 ZMPSTE24O75844 475 aa24.38■■□□□ 1.49
TMEM260-207ENST00000555497 KRT34O76011 436 aa24.38■■□□□ 1.49
TMEM260-207ENST00000555497 LTA4HP09960 611 aaKnown RBP24.38■■□□□ 1.49
TMEM260-207ENST00000555497 COPAP53621 1224 aa24.38■■□□□ 1.49
TMEM260-207ENST00000555497 OXCT1P55809 520 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms