RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 BRAT1Q6PJG6 821 aa12.51□□□□□ -0.41
TRAPPC6B-205ENST00000555269 ABI3BPQ7Z7G0 1075 aa12.51□□□□□ -0.41
TRAPPC6B-205ENST00000555269 SLC22A18ASQ8N1D0 253 aa12.51□□□□□ -0.41
TRAPPC6B-205ENST00000555269 TEX26Q8N6G2 289 aa12.51□□□□□ -0.41
TRAPPC6B-205ENST00000555269 PAF1Q8N7H5 531 aa12.51□□□□□ -0.41
TRAPPC6B-205ENST00000555269 PNPLA1Q8N8W4 532 aa12.51□□□□□ -0.41
TRAPPC6B-205ENST00000555269 CCNYQ8ND76 341 aa12.51□□□□□ -0.41
TRAPPC6B-205ENST00000555269 TPCN2Q8NHX9 752 aa12.51□□□□□ -0.41
TRAPPC6B-205ENST00000555269 CXorf40AQ8TE69 158 aa12.51□□□□□ -0.41
TRAPPC6B-205ENST00000555269 SAP25Q8TEE9 199 aa12.51□□□□□ -0.41
TRAPPC6B-205ENST00000555269 PDCD6IPQ8WUM4 868 aaKnown RBP12.51□□□□□ -0.41
TRAPPC6B-205ENST00000555269 ECHDC3Q96DC8 303 aa12.51□□□□□ -0.41
TRAPPC6B-205ENST00000555269 TSGA13Q96PP4 275 aa12.51□□□□□ -0.41
TRAPPC6B-205ENST00000555269 LENG8Q96PV6 779 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC6B-205ENST00000555269 NUDCD1Q96RS6 583 aa12.51□□□□□ -0.41
TRAPPC6B-205ENST00000555269 MGME1Q9BQP7 344 aa12.51□□□□□ -0.41
TRAPPC6B-205ENST00000555269 ERVMER34-1Q9H9K5 563 aa12.51□□□□□ -0.41
TRAPPC6B-205ENST00000555269 DDX56Q9NY93 547 aaKnown RBP12.51□□□□□ -0.41
TRAPPC6B-205ENST00000555269 SPEGQ15772 3267 aa12.51□□□□□ -0.41
TRAPPC6B-205ENST00000555269 A0A0A6YYK5 440 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC6B-205ENST00000555269 A0A0U1RQS6 177 aa12.5□□□□□ -0.41
TRAPPC6B-205ENST00000555269 HTRA2O43464 458 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC6B-205ENST00000555269 PCDHGA12O60330 932 aa12.5□□□□□ -0.41
TRAPPC6B-205ENST00000555269 SDC3O75056 442 aa12.5□□□□□ -0.41
TRAPPC6B-205ENST00000555269 TM7SF2O76062 418 aa12.5□□□□□ -0.41
TRAPPC6B-205ENST00000555269 JCHAINP01591 159 aa12.5□□□□□ -0.41
TRAPPC6B-205ENST00000555269 ITGAVP06756 1048 aa12.5□□□□□ -0.41
TRAPPC6B-205ENST00000555269 CCNB1P14635 433 aa12.5□□□□□ -0.41
TRAPPC6B-205ENST00000555269 SPINK2P20155 84 aa12.5□□□□□ -0.41
TRAPPC6B-205ENST00000555269 CDKN2BP42772 138 aa12.5□□□□□ -0.41
TRAPPC6B-205ENST00000555269 RXRGP48443 463 aa12.5□□□□□ -0.41
TRAPPC6B-205ENST00000555269 NAP1L1P55209 391 aaKnown RBP12.5□□□□□ -0.41
TRAPPC6B-205ENST00000555269 DSC2Q02487 901 aa12.5□□□□□ -0.41
TRAPPC6B-205ENST00000555269 NIPAL4Q0D2K0 466 aa12.5□□□□□ -0.41
TRAPPC6B-205ENST00000555269 OVGP1Q12889 678 aa12.5□□□□□ -0.41
TRAPPC6B-205ENST00000555269 TRAF2Q12933 501 aa12.5□□□□□ -0.41
TRAPPC6B-205ENST00000555269 KAZNQ674X7 775 aa12.5□□□□□ -0.41
TRAPPC6B-205ENST00000555269 SLC9A4Q6AI14 798 aa12.5□□□□□ -0.41
TRAPPC6B-205ENST00000555269 PTAR1Q7Z6K3 402 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC6B-205ENST00000555269 DAAM2Q86T65 1068 aa12.5□□□□□ -0.41
TRAPPC6B-205ENST00000555269 SLCO6A1Q86UG4 719 aa12.5□□□□□ -0.41
TRAPPC6B-205ENST00000555269 ASB12Q8WXK4 309 aa12.5□□□□□ -0.41
TRAPPC6B-205ENST00000555269 MAML1Q92585 1016 aa12.5□□□□□ -0.41
TRAPPC6B-205ENST00000555269 KRT35Q92764 455 aa12.5□□□□□ -0.41
TRAPPC6B-205ENST00000555269 SMIM14Q96QK8 99 aa12.5□□□□□ -0.41
TRAPPC6B-205ENST00000555269 SEMA3CQ99985 751 aa12.5□□□□□ -0.41
TRAPPC6B-205ENST00000555269 DESI2Q9BSY9 194 aa12.5□□□□□ -0.41
TRAPPC6B-205ENST00000555269 ANP32EQ9BTT0 268 aa12.5□□□□□ -0.41
TRAPPC6B-205ENST00000555269 IMPACTQ9P2X3 320 aa12.5□□□□□ -0.41
TRAPPC6B-205ENST00000555269 ATP8A1Q9Y2Q0 1164 aa12.5□□□□□ -0.41
TRAPPC6B-205ENST00000555269 TRPM6Q9BX84 2022 aa12.5□□□□□ -0.41
TRAPPC6B-205ENST00000555269 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC6B-205ENST00000555269 A6NNZ2 444 aa12.49□□□□□ -0.41
TRAPPC6B-205ENST00000555269 KCNK1O00180 336 aa12.49□□□□□ -0.41
TRAPPC6B-205ENST00000555269 FPGTO14772 594 aa12.49□□□□□ -0.41
TRAPPC6B-205ENST00000555269 APOL1O14791 398 aa12.49□□□□□ -0.41
TRAPPC6B-205ENST00000555269 MAGEC1O60732 1142 aa12.49□□□□□ -0.41
TRAPPC6B-205ENST00000555269 PDHA1P08559 390 aa12.49□□□□□ -0.41
TRAPPC6B-205ENST00000555269 ATXN1LP0C7T5 689 aaKnown RBP12.49□□□□□ -0.41
TRAPPC6B-205ENST00000555269 C6P13671 934 aa12.49□□□□□ -0.41
TRAPPC6B-205ENST00000555269 PMLP29590 882 aa12.49□□□□□ -0.41
TRAPPC6B-205ENST00000555269 HSPA9P38646 679 aaKnown RBP12.49□□□□□ -0.41
TRAPPC6B-205ENST00000555269 SUOXP51687 545 aa12.49□□□□□ -0.41
TRAPPC6B-205ENST00000555269 POLR2LP62875 67 aaKnown RBP12.49□□□□□ -0.41
TRAPPC6B-205ENST00000555269 ELP6Q0PNE2 266 aa12.49□□□□□ -0.41
TRAPPC6B-205ENST00000555269 FOXC1Q12948 553 aa12.49□□□□□ -0.41
TRAPPC6B-205ENST00000555269 RALGDSQ12967 914 aa12.49□□□□□ -0.41
TRAPPC6B-205ENST00000555269 FZD2Q14332 565 aa12.49□□□□□ -0.41
TRAPPC6B-205ENST00000555269 TAZQ16635 292 aa12.49□□□□□ -0.41
TRAPPC6B-205ENST00000555269 WSCD2Q2TBF2 565 aa12.49□□□□□ -0.41
TRAPPC6B-205ENST00000555269 ODF2Q5BJF6 829 aa12.49□□□□□ -0.41
TRAPPC6B-205ENST00000555269 ERAP2Q6P179 960 aa12.49□□□□□ -0.41
TRAPPC6B-205ENST00000555269 SPOCD1Q6ZMY3 1216 aa12.49□□□□□ -0.41
TRAPPC6B-205ENST00000555269 CCDC13Q8IYE1 715 aa12.49□□□□□ -0.41
TRAPPC6B-205ENST00000555269 RCOR2Q8IZ40 523 aa12.49□□□□□ -0.41
TRAPPC6B-205ENST00000555269 BBS5Q8N3I7 341 aa12.49□□□□□ -0.41
TRAPPC6B-205ENST00000555269 SLC25A45Q8N413 288 aa12.49□□□□□ -0.41
TRAPPC6B-205ENST00000555269 EID2Q8N6I1 236 aa12.49□□□□□ -0.41
TRAPPC6B-205ENST00000555269 TP53I13Q8NBR0 393 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC6B-205ENST00000555269 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC6B-205ENST00000555269 LUC7LQ9NQ29 371 aaKnown RBP12.49□□□□□ -0.41
TRAPPC6B-205ENST00000555269 UCKL1Q9NWZ5 548 aa12.49□□□□□ -0.41
TRAPPC6B-205ENST00000555269 TRIM10Q9UDY6 481 aa12.49□□□□□ -0.41
TRAPPC6B-205ENST00000555269 KLF15Q9UIH9 416 aa12.49□□□□□ -0.41
TRAPPC6B-205ENST00000555269 TTLL3Q9Y4R7 772 aa12.49□□□□□ -0.41
TRAPPC6B-205ENST00000555269 ZNF487B1APH4 448 aa12.48□□□□□ -0.41
TRAPPC6B-205ENST00000555269 FLRT2O43155 660 aa12.48□□□□□ -0.41
TRAPPC6B-205ENST00000555269 PJA2O43164 708 aa12.48□□□□□ -0.41
TRAPPC6B-205ENST00000555269 PSTPIP1O43586 416 aa12.48□□□□□ -0.41
TRAPPC6B-205ENST00000555269 LZTS3O60299 673 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC6B-205ENST00000555269 CST8O60676 142 aa12.48□□□□□ -0.41
TRAPPC6B-205ENST00000555269 ZRANB2O95218 330 aaKnown RBP eCLIP12.48□□□□□ -0.41
TRAPPC6B-205ENST00000555269 HLA-DQB2P05538 268 aa12.48□□□□□ -0.41
TRAPPC6B-205ENST00000555269 CTPS1P17812 591 aa12.48□□□□□ -0.41
TRAPPC6B-205ENST00000555269 MX2P20592 715 aa12.48□□□□□ -0.41
TRAPPC6B-205ENST00000555269 EPHA8P29322 1005 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC6B-205ENST00000555269 IGFALSP35858 605 aa12.48□□□□□ -0.41
TRAPPC6B-205ENST00000555269 MMP12P39900 470 aa12.48□□□□□ -0.41
TRAPPC6B-205ENST00000555269 ARRB1P49407 418 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC6B-205ENST00000555269 VAV2P52735 878 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms