RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 CTPS1P17812 591 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 CDK18Q07002 472 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 CDH17Q12864 832 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 PTPRCAPQ14761 206 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 EFTUD2Q15029 972 aaKnown RBP eCLIP10.84□□□□□ -0.672e-8■■■■■ 57.6
TDP1-211ENST00000555178 TRIM67Q6ZTA4 783 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 MMAAQ8IVH4 418 aaKnown RBP10.84□□□□□ -0.67
TDP1-211ENST00000555178 LPCAT1Q8NF37 534 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 PYROXD1Q8WU10 500 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 ARRDC3Q96B67 414 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 KLHL32Q96NJ5 620 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 ZIM3Q96PE6 472 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 UHRF1Q96T88 793 aaPredicted RBP10.84□□□□□ -0.67
TDP1-211ENST00000555178 PABPC3Q9H361 631 aaKnown RBP10.84□□□□□ -0.67
TDP1-211ENST00000555178 GOLGA6AQ9NYA3 693 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 SERGEFQ9UGK8 458 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 GGT7Q9UJ14 662 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 PCDHB9Q9Y5E1 797 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 SPO11Q9Y5K1 396 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 DNAH14Q0VDD8 3507 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 GOLGA8CPA6NN73 597 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 BUD23O43709 281 aaKnown RBP10.84□□□□□ -0.67
TDP1-211ENST00000555178 TTC4O95801 387 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 CPP00450 1065 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 F7P08709 466 aaPredicted RBP10.84□□□□□ -0.67
TDP1-211ENST00000555178 MLNP12872 115 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 NTSR1P30989 418 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 VASPP50552 380 aaPredicted RBP10.84□□□□□ -0.67
TDP1-211ENST00000555178 SNRPD1P62314 119 aaKnown RBP10.84□□□□□ -0.67
TDP1-211ENST00000555178 SARNPP82979 210 aaKnown RBP10.84□□□□□ -0.67
TDP1-211ENST00000555178 RELL1Q8IUW5 271 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 UCMAQ8WVF2 138 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 IFT43Q96FT9 208 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 GABRG3Q99928 467 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 FOXP3Q9BZS1 431 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 VPS37BQ9H9H4 285 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 CHRAC1Q9NRG0 131 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 PLAAQ9Y263 795 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 KCTD3Q9Y597 815 aa10.84□□□□□ -0.67
TDP1-211ENST00000555178 LAMA1P25391 3075 aa10.83□□□□□ -0.68
TDP1-211ENST00000555178 EDDM13A0A1B0GTR0 161 aa10.83□□□□□ -0.68
TDP1-211ENST00000555178 MAP2K7O14733 419 aa10.83□□□□□ -0.68
TDP1-211ENST00000555178 SPINT1O43278 529 aa10.83□□□□□ -0.68
TDP1-211ENST00000555178 SLC4A1P02730 911 aa10.83□□□□□ -0.68
TDP1-211ENST00000555178 NNMTP40261 264 aa10.83□□□□□ -0.68
TDP1-211ENST00000555178 PRKCQQ04759 706 aa10.83□□□□□ -0.68
TDP1-211ENST00000555178 CAMK2GQ13555 558 aaPredicted RBP10.83□□□□□ -0.68
TDP1-211ENST00000555178 DNAJC21Q5F1R6 531 aaKnown RBP10.83□□□□□ -0.68
TDP1-211ENST00000555178 CWF19L1Q69YN2 538 aaKnown RBP10.83□□□□□ -0.68
TDP1-211ENST00000555178 TRMT10BQ6PF06 316 aaKnown RBP10.83□□□□□ -0.68
TDP1-211ENST00000555178 UNC5AQ6ZN44 842 aa10.83□□□□□ -0.68
TDP1-211ENST00000555178 HDXQ7Z353 690 aa10.83□□□□□ -0.68
TDP1-211ENST00000555178 UBALD2Q8IYN6 164 aa10.83□□□□□ -0.68
TDP1-211ENST00000555178 PNPLA1Q8N8W4 532 aa10.83□□□□□ -0.68
TDP1-211ENST00000555178 PIH1D2Q8WWB5 315 aa10.83□□□□□ -0.68
TDP1-211ENST00000555178 MFSD3Q96ES6 412 aa10.83□□□□□ -0.68
TDP1-211ENST00000555178 STAMBPL1Q96FJ0 436 aa10.83□□□□□ -0.68
TDP1-211ENST00000555178 FEM1CQ96JP0 617 aa10.83□□□□□ -0.68
TDP1-211ENST00000555178 FCRL3Q96P31 734 aaPredicted RBP10.83□□□□□ -0.68
TDP1-211ENST00000555178 EBNA1BP2Q99848 306 aaKnown RBP10.83□□□□□ -0.68
TDP1-211ENST00000555178 HEPHQ9BQS7 1158 aa10.83□□□□□ -0.68
TDP1-211ENST00000555178 SLC17A6Q9P2U8 582 aa10.83□□□□□ -0.68
TDP1-211ENST00000555178 ZC3H7BQ9UGR2 993 aaKnown RBP10.83□□□□□ -0.68
TDP1-211ENST00000555178 IL36AQ9UHA7 158 aa10.83□□□□□ -0.68
TDP1-211ENST00000555178 PPM1HQ9ULR3 514 aa10.83□□□□□ -0.68
TDP1-211ENST00000555178 ITM2BQ9Y287 266 aa10.83□□□□□ -0.68
TDP1-211ENST00000555178 TRPM6Q9BX84 2022 aa10.83□□□□□ -0.68
TDP1-211ENST00000555178 GON4LQ3T8J9 2241 aa10.83□□□□□ -0.68
TDP1-211ENST00000555178 FRYLO94915 3013 aa10.83□□□□□ -0.68
TDP1-211ENST00000555178 SDR42E2A6NKP2 422 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 STK25O00506 426 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 CCL22O00626 93 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 MAN2B1O00754 1011 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 EIF3HO15372 352 aaKnown RBP eCLIP10.82□□□□□ -0.68
TDP1-211ENST00000555178 HTRA2O43464 458 aaPredicted RBP10.82□□□□□ -0.68
TDP1-211ENST00000555178 POP4O95707 220 aaKnown RBP10.82□□□□□ -0.68
TDP1-211ENST00000555178 HOXB2P14652 356 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 PSMD8P48556 350 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 CSNK1DP48730 415 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 AP1S1P61966 158 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 SEPT6Q14141 434 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 QPCTQ16769 361 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 TRMT10CQ7L0Y3 403 aaKnown RBP10.82□□□□□ -0.68
TDP1-211ENST00000555178 PARS2Q7L3T8 475 aaKnown RBP10.82□□□□□ -0.68
TDP1-211ENST00000555178 LINC00523Q86TU6 105 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 SUGP1Q8IWZ8 645 aaKnown RBP10.82□□□□□ -0.68
TDP1-211ENST00000555178 IQCKQ8N0W5 287 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 AADATQ8N5Z0 425 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 PJA1Q8NG27 643 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 PIP4K2CQ8TBX8 421 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 BLOC1S5Q8TDH9 187 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 EID2BQ96D98 161 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 RMDN1Q96DB5 314 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 FRMD8Q9BZ67 464 aaPredicted RBP10.82□□□□□ -0.68
TDP1-211ENST00000555178 PHACTR1Q9C0D0 580 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 SUV39H2Q9H5I1 410 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 SLC2A6Q9UGQ3 507 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 NFS1Q9Y697 457 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 MYO15AQ9UKN7 3530 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 SDK1Q7Z5N4 2213 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms