RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 RNF103-CHMP3A0A140T963 221 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 ZBTB42B2RXF5 422 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 E7ENX8 843 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 INO80B-WBP1J3KQ70 363 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 TRIM24O15164 1050 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 ITIH1P19827 911 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 TGM2P21980 687 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 CAPGP40121 348 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 TMEM132AQ24JP5 1023 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 CDONQ4KMG0 1287 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 BOLA3Q53S33 107 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 BROXQ5VW32 411 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 SMYD5Q6GMV2 418 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 TWF2Q6IBS0 349 aaKnown RBP15.76■□□□□ 0.11
SYNE3-203ENST00000554873 LSMEM1Q8N8F7 131 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 IL12RB2Q99665 862 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 UPF3AQ9H1J1 476 aaKnown RBP15.76■□□□□ 0.11
SYNE3-203ENST00000554873 RAD54BQ9Y620 910 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 LACTBL1A8MY62 500 aa15.75■□□□□ 0.11
SYNE3-203ENST00000554873 CCRL2O00421 344 aa15.75■□□□□ 0.11
SYNE3-203ENST00000554873 HDAC3O15379 428 aa15.75■□□□□ 0.11
SYNE3-203ENST00000554873 FKBP9O95302 570 aa15.75■□□□□ 0.11
SYNE3-203ENST00000554873 ARL1P40616 181 aaPredicted RBP15.75■□□□□ 0.11
SYNE3-203ENST00000554873 CRTC3Q6UUV7 619 aa15.75■□□□□ 0.11
SYNE3-203ENST00000554873 SAMD7Q7Z3H4 446 aa15.75■□□□□ 0.11
SYNE3-203ENST00000554873 SFRP1Q8N474 314 aa15.75■□□□□ 0.11
SYNE3-203ENST00000554873 DHRSXQ8N5I4 330 aa15.75■□□□□ 0.11
SYNE3-203ENST00000554873 NATD1Q8N6N6 113 aa15.75■□□□□ 0.11
SYNE3-203ENST00000554873 CXorf38Q8TB03 319 aa15.75■□□□□ 0.11
SYNE3-203ENST00000554873 AGR3Q8TD06 166 aa15.75■□□□□ 0.11
SYNE3-203ENST00000554873 CDT1Q9H211 546 aa15.75■□□□□ 0.11
SYNE3-203ENST00000554873 FZD8Q9H461 694 aa15.75■□□□□ 0.11
SYNE3-203ENST00000554873 C8orf4Q9NR00 106 aa15.75■□□□□ 0.11
SYNE3-203ENST00000554873 MTRF1O75570 445 aaKnown RBP15.75■□□□□ 0.11
SYNE3-203ENST00000554873 M6PRP20645 277 aa15.75■□□□□ 0.11
SYNE3-203ENST00000554873 EEF1B2P24534 225 aaKnown RBP15.75■□□□□ 0.11
SYNE3-203ENST00000554873 HOXD10P28358 340 aa15.75■□□□□ 0.11
SYNE3-203ENST00000554873 CASP3P42574 277 aa15.75■□□□□ 0.11
SYNE3-203ENST00000554873 SELPLGQ14242 412 aa15.75■□□□□ 0.11
SYNE3-203ENST00000554873 MAPK11Q15759 364 aa15.75■□□□□ 0.11
SYNE3-203ENST00000554873 SEL1L3Q68CR1 1132 aa15.75■□□□□ 0.11
SYNE3-203ENST00000554873 XAF1Q6GPH4 301 aa15.75■□□□□ 0.11
SYNE3-203ENST00000554873 LACC1Q8IV20 430 aa15.75■□□□□ 0.11
SYNE3-203ENST00000554873 UNC5BQ8IZJ1 945 aa15.75■□□□□ 0.11
SYNE3-203ENST00000554873 PCDH20Q8N6Y1 951 aaKnown RBP15.75■□□□□ 0.11
SYNE3-203ENST00000554873 HDAC11Q96DB2 347 aa15.75■□□□□ 0.11
SYNE3-203ENST00000554873 ILKAPQ9H0C8 392 aaPredicted RBP15.75■□□□□ 0.11
SYNE3-203ENST00000554873 C2orf40Q9H1Z8 148 aa15.75■□□□□ 0.11
SYNE3-203ENST00000554873 NGRNQ9NPE2 291 aaKnown RBP15.75■□□□□ 0.11
SYNE3-203ENST00000554873 FBXO8Q9NRD0 319 aa15.75■□□□□ 0.11
SYNE3-203ENST00000554873 HACL1Q9UJ83 578 aa15.75■□□□□ 0.11
SYNE3-203ENST00000554873 EIF3LQ9Y262 564 aaKnown RBP15.75■□□□□ 0.11
SYNE3-203ENST00000554873 KRT8P05787 483 aa15.74■□□□□ 0.11
SYNE3-203ENST00000554873 RGS7P49802 495 aa15.74■□□□□ 0.11
SYNE3-203ENST00000554873 PLA2G16P53816 162 aa15.74■□□□□ 0.11
SYNE3-203ENST00000554873 C19orf57Q0VDD7 668 aa15.74■□□□□ 0.11
SYNE3-203ENST00000554873 ILF2Q12905 390 aaKnown RBP15.74■□□□□ 0.11
SYNE3-203ENST00000554873 LY6KQ17RY6 165 aa15.74■□□□□ 0.11
SYNE3-203ENST00000554873 JADE1Q6IE81 842 aa15.74■□□□□ 0.11
SYNE3-203ENST00000554873 SLCO6A1Q86UG4 719 aa15.74■□□□□ 0.11
SYNE3-203ENST00000554873 CHAC2Q8WUX2 184 aa15.74■□□□□ 0.11
SYNE3-203ENST00000554873 OSCP1Q8WVF1 389 aa15.74■□□□□ 0.11
SYNE3-203ENST00000554873 MARK4Q96L34 752 aa15.74■□□□□ 0.11
SYNE3-203ENST00000554873 SEZ6LQ9BYH1 1024 aa15.74■□□□□ 0.11
SYNE3-203ENST00000554873 CLPBQ9H078 707 aa15.74■□□□□ 0.11
SYNE3-203ENST00000554873 MINDY3Q9H8M7 445 aa15.74■□□□□ 0.11
SYNE3-203ENST00000554873 HOXC10Q9NYD6 342 aa15.74■□□□□ 0.11
SYNE3-203ENST00000554873 PCDHGA8Q9Y5G5 932 aa15.74■□□□□ 0.11
SYNE3-203ENST00000554873 PCDHA11Q9Y5I1 949 aa15.74■□□□□ 0.11
SYNE3-203ENST00000554873 IGKV6-21A0A0C4DH24 114 aa15.74■□□□□ 0.11
SYNE3-203ENST00000554873 SYNCRIPO60506 623 aaKnown RBP15.74■□□□□ 0.11
SYNE3-203ENST00000554873 BMP4P12644 408 aa15.74■□□□□ 0.11
SYNE3-203ENST00000554873 DPEP1P16444 411 aa15.74■□□□□ 0.11
SYNE3-203ENST00000554873 ZNF280AP59817 542 aaPredicted RBP15.74■□□□□ 0.11
SYNE3-203ENST00000554873 ATP6AP1Q15904 470 aa15.74■□□□□ 0.11
SYNE3-203ENST00000554873 NFE2Q16621 373 aaPredicted RBP15.74■□□□□ 0.11
SYNE3-203ENST00000554873 NAPRTQ6XQN6 538 aa15.74■□□□□ 0.11
SYNE3-203ENST00000554873 CANT1Q8WVQ1 401 aa15.74■□□□□ 0.11
SYNE3-203ENST00000554873 TRAPPC12Q8WVT3 735 aa15.74■□□□□ 0.11
SYNE3-203ENST00000554873 STON2Q8WXE9 905 aa15.74■□□□□ 0.11
SYNE3-203ENST00000554873 FKBP10Q96AY3 582 aa15.74■□□□□ 0.11
SYNE3-203ENST00000554873 PPP1R36Q96LQ0 422 aa15.74■□□□□ 0.11
SYNE3-203ENST00000554873 SNX18Q96RF0 628 aa15.74■□□□□ 0.11
SYNE3-203ENST00000554873 VPS33BQ9H267 617 aa15.74■□□□□ 0.11
SYNE3-203ENST00000554873 XPNPEP3Q9NQH7 507 aa15.74■□□□□ 0.11
SYNE3-203ENST00000554873 SFMBT1Q9UHJ3 866 aa15.74■□□□□ 0.11
SYNE3-203ENST00000554873 ZNF112Q9UJU3 913 aa15.74■□□□□ 0.11
SYNE3-203ENST00000554873 PRORSD1PA6NEY8 169 aa15.73■□□□□ 0.11
SYNE3-203ENST00000554873 C19orf81C9J6K1 198 aa15.73■□□□□ 0.11
SYNE3-203ENST00000554873 GSNP06396 782 aa15.73■□□□□ 0.11
SYNE3-203ENST00000554873 PFKMP08237 780 aa15.73■□□□□ 0.11
SYNE3-203ENST00000554873 IQCF3P0C7M6 154 aa15.73■□□□□ 0.11
SYNE3-203ENST00000554873 SLC26A2P50443 739 aa15.73■□□□□ 0.11
SYNE3-203ENST00000554873 HK2P52789 917 aa15.73■□□□□ 0.11
SYNE3-203ENST00000554873 SLC12A1Q13621 1099 aa15.73■□□□□ 0.11
SYNE3-203ENST00000554873 RSBN1Q5VWQ0 802 aaPredicted RBP15.73■□□□□ 0.11
SYNE3-203ENST00000554873 BTN2A3PQ96KV6 586 aa15.73■□□□□ 0.11
SYNE3-203ENST00000554873 APBA2Q99767 749 aa15.73■□□□□ 0.11
SYNE3-203ENST00000554873 SNRNP25Q9BV90 132 aaKnown RBP15.73■□□□□ 0.11
SYNE3-203ENST00000554873 SLC7A5P2Q9GIP4 190 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms