RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 FAM217AQ8IXS0 508 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 ZDHHC23Q8IYP9 409 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 TMEM116Q8NCL8 245 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 ENGASEQ8NFI3 743 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 BICD2Q8TD16 824 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 LPAR1Q92633 364 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 ZKSCAN4Q969J2 545 aaPredicted RBP3.26□□□□□ -1.89
SCFD1-213ENST00000554776 ERP27Q96DN0 273 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 MARK4Q96L34 752 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 BBS4Q96RK4 519 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 NUDT16L1Q9BRJ7 211 aaKnown RBP3.26□□□□□ -1.89
SCFD1-213ENST00000554776 LHPPQ9H008 270 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 PRKRIP1Q9H875 184 aaPredicted RBP3.26□□□□□ -1.89
SCFD1-213ENST00000554776 WDR6Q9NNW5 1121 aaKnown RBP3.26□□□□□ -1.89
SCFD1-213ENST00000554776 SMYD2Q9NRG4 433 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 SIRT3Q9NTG7 399 aaPredicted RBP3.26□□□□□ -1.89
SCFD1-213ENST00000554776 ANKEF1Q9NU02 776 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 HCFC1R1Q9NWW0 138 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 RAP2CQ9Y3L5 183 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 ADAM18Q9Y3Q7 739 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 RAI2Q9Y5P3 530 aa3.26□□□□□ -1.89
SCFD1-213ENST00000554776 TYW5A2RUC4 315 aaKnown RBP3.25□□□□□ -1.89
SCFD1-213ENST00000554776 LIPT2A6NK58 231 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 LRRC53A6NM62 1247 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 NPIPB11E5RHQ5 1161 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 VILLO15195 856 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 RNMTO43148 476 aaKnown RBP3.25□□□□□ -1.89
SCFD1-213ENST00000554776 ATP2C2O75185 946 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 CCNDBP1O95273 360 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 CLDN7O95471 211 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 EIF2S1P05198 315 aaKnown RBP3.25□□□□□ -1.89
SCFD1-213ENST00000554776 HEXAP06865 529 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 CLTBP09497 229 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 MYZAPP0CAP1 466 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 PORP16435 677 aaPredicted RBP3.25□□□□□ -1.89
SCFD1-213ENST00000554776 IL7RP16871 459 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 ALOX12P18054 663 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 ITGAXP20702 1163 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 BSGP35613 385 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 GARSP41250 739 aaKnown RBP3.25□□□□□ -1.89
SCFD1-213ENST00000554776 PGGT1BP53609 377 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 SNX16P57768 344 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 CUL4AQ13619 759 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 RUNX2Q13950 521 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 RNPS1Q15287 305 aaKnown RBP3.25□□□□□ -1.89
SCFD1-213ENST00000554776 GSTA3Q16772 222 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 CFAP58Q5T655 872 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 KLHL35Q6PF15 583 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 TSSK4Q6SA08 328 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 CLEC17AQ6ZS10 378 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 SZRD1Q7Z422 152 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 GALNT5Q7Z7M9 940 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 SERPINA11Q86U17 422 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 NOXA1Q86UR1 476 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 OR8H2Q8N162 312 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 C17orf53Q8N3J3 647 aaPredicted RBP3.25□□□□□ -1.89
SCFD1-213ENST00000554776 HORMAD2Q8N7B1 307 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 C11orf65Q8NCR3 313 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 C7orf57Q8NEG2 295 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 OR4N2Q8NGD1 307 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 PSPC1Q8WXF1 523 aaKnown RBP3.25□□□□□ -1.89
SCFD1-213ENST00000554776 GTF3C6Q969F1 213 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 SMARCE1Q969G3 411 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 URB1-AS1Q96HZ7 61 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 LYZL4Q96KX0 146 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 CMTM3Q96MX0 182 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 YME1L1Q96TA2 773 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 MXD3Q9BW11 206 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 TKTL2Q9H0I9 626 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 CCDC68Q9H2F9 335 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 MUC13Q9H3R2 512 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 KIF9Q9HAQ2 790 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 EHD2Q9NZN4 543 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 SEL1LQ9UBV2 794 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 CNOT8Q9UFF9 292 aaKnown RBP3.25□□□□□ -1.89
SCFD1-213ENST00000554776 POLG2Q9UHN1 485 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 SLCO3A1Q9UIG8 710 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 A4GNTQ9UNA3 340 aa3.25□□□□□ -1.89
SCFD1-213ENST00000554776 A0A1W2PQF6 199 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 C17orf102A2RUQ5 167 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 CBY3A6NI87 242 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 HSPB2A8KAH6 182 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 AGAP14A8MT82 685 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 MYO1GB0I1T2 1018 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 KLRF2D3W0D1 207 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 STMND1H3BQB6 276 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 I6L893 689 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-213ENST00000554776 HSPB6O14558 160 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 SMAD6O43541 496 aaKnown RBP3.24□□□□□ -1.89
SCFD1-213ENST00000554776 TMCC2O75069 709 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 AKR1B1P15121 316 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 RRM1P23921 792 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 PSMA4P25789 261 aaKnown RBP3.24□□□□□ -1.89
SCFD1-213ENST00000554776 YWHAQP27348 245 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 TM4SF1P30408 202 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 CCKARP32238 428 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 ACSL1P33121 698 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 RFC1P35251 1148 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-213ENST00000554776 KRT20P35900 424 aa3.24□□□□□ -1.89
SCFD1-213ENST00000554776 PIP4K2AP48426 406 aaPredicted RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms