RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 SMPD4Q9NXE4 827 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 CPA4Q9UI42 421 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 IKZF3Q9UKT9 509 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 POLR1DQ9Y2S0 133 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 SGTAO43765 313 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 GUCY1B2O75343 617 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 DBTP11182 482 aaKnown RBP14.03□□□□□ -0.16
VTI1B-204ENST00000554659 MAPK8P45983 427 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 POLD2P49005 469 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 JAM2P57087 298 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 HIPK1Q86Z02 1210 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 LRRC52Q8N7C0 313 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 NKX2-3Q8TAU0 364 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 USP7Q93009 1102 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 TTYH3Q9C0H2 523 aa14.03□□□□□ -0.16
VTI1B-204ENST00000554659 R3HDM2Q9Y2K5 976 aaKnown RBP14.03□□□□□ -0.16
VTI1B-204ENST00000554659 SPATA31C2B4DYI2 1134 aa14.02□□□□□ -0.16
VTI1B-204ENST00000554659 PSMD4P55036 377 aaKnown RBP14.02□□□□□ -0.16
VTI1B-204ENST00000554659 MRPS5P82675 430 aaKnown RBP14.02□□□□□ -0.16
VTI1B-204ENST00000554659 KLF10Q13118 480 aa14.02□□□□□ -0.16
VTI1B-204ENST00000554659 SLC1A5Q15758 541 aa14.02□□□□□ -0.16
VTI1B-204ENST00000554659 GPR107Q5VW38 600 aa14.02□□□□□ -0.16
VTI1B-204ENST00000554659 ADGRD1Q6QNK2 874 aa14.02□□□□□ -0.16
VTI1B-204ENST00000554659 NELL1Q92832 810 aa14.02□□□□□ -0.16
VTI1B-204ENST00000554659 MAGEL2Q9UJ55 1249 aa14.02□□□□□ -0.16
VTI1B-204ENST00000554659 BTRCQ9Y297 605 aa14.02□□□□□ -0.16
VTI1B-204ENST00000554659 PTCH2Q9Y6C5 1203 aa14.02□□□□□ -0.16
VTI1B-204ENST00000554659 KPNA5O15131 536 aa14.02□□□□□ -0.16
VTI1B-204ENST00000554659 HNRNPLP14866 589 aaKnown RBP eCLIP14.02□□□□□ -0.16
VTI1B-204ENST00000554659 ZNF37AP17032 561 aaPredicted RBP14.02□□□□□ -0.16
VTI1B-204ENST00000554659 ADCYAP1R1P41586 468 aa14.02□□□□□ -0.16
VTI1B-204ENST00000554659 SLC7A2P52569 658 aa14.02□□□□□ -0.16
VTI1B-204ENST00000554659 USP4Q13107 963 aa14.02□□□□□ -0.16
VTI1B-204ENST00000554659 ZNF846Q147U1 533 aa14.02□□□□□ -0.16
VTI1B-204ENST00000554659 PMF1Q6P1K2 205 aa14.02□□□□□ -0.16
VTI1B-204ENST00000554659 FITM2Q8N6M3 262 aa14.02□□□□□ -0.16
VTI1B-204ENST00000554659 JOSD2Q8TAC2 188 aa14.02□□□□□ -0.16
VTI1B-204ENST00000554659 ZHX1-C8orf76Q96EF9 292 aa14.02□□□□□ -0.16
VTI1B-204ENST00000554659 REXO5Q96IC2 774 aaKnown RBP14.02□□□□□ -0.16
VTI1B-204ENST00000554659 CCDC3Q9BQI4 270 aa14.02□□□□□ -0.16
VTI1B-204ENST00000554659 COG5Q9UP83 839 aa14.02□□□□□ -0.16
VTI1B-204ENST00000554659 CCDC182A6NF36 153 aa14.02□□□□□ -0.17
VTI1B-204ENST00000554659 SH3BGRLO75368 114 aa14.02□□□□□ -0.17
VTI1B-204ENST00000554659 COL6A2P12110 1019 aa14.02□□□□□ -0.17
VTI1B-204ENST00000554659 ATP5C1P36542 298 aaKnown RBP14.02□□□□□ -0.17
VTI1B-204ENST00000554659 RPL3P39023 403 aaKnown RBP14.02□□□□□ -0.17
VTI1B-204ENST00000554659 PSEN1P49768 467 aa14.02□□□□□ -0.17
VTI1B-204ENST00000554659 RPL38P63173 70 aaKnown RBP14.02□□□□□ -0.17
VTI1B-204ENST00000554659 ACOX1Q15067 660 aa14.02□□□□□ -0.17
VTI1B-204ENST00000554659 FAM81AQ8TBF8 368 aa14.02□□□□□ -0.17
VTI1B-204ENST00000554659 P2RY11Q96G91 374 aa14.02□□□□□ -0.17
VTI1B-204ENST00000554659 TSPAN18Q96SJ8 248 aa14.02□□□□□ -0.17
VTI1B-204ENST00000554659 C2orf49Q9BVC5 232 aaPredicted RBP14.02□□□□□ -0.17
VTI1B-204ENST00000554659 GBA2Q9HCG7 927 aaPredicted RBP14.02□□□□□ -0.17
VTI1B-204ENST00000554659 CTBP1Q13363 440 aa14.02□□□□□ -0.17
VTI1B-204ENST00000554659 GNA13Q14344 377 aa14.02□□□□□ -0.17
VTI1B-204ENST00000554659 PSMD5Q16401 504 aa14.02□□□□□ -0.17
VTI1B-204ENST00000554659 LYPLAL1Q5VWZ2 237 aa14.02□□□□□ -0.17
VTI1B-204ENST00000554659 TBC1D21Q8IYX1 336 aa14.02□□□□□ -0.17
VTI1B-204ENST00000554659 ZNF557Q8N988 423 aaPredicted RBP14.02□□□□□ -0.17
VTI1B-204ENST00000554659 IL31RAQ8NI17 732 aa14.02□□□□□ -0.17
VTI1B-204ENST00000554659 CD101Q93033 1021 aa14.02□□□□□ -0.17
VTI1B-204ENST00000554659 ASB8Q9H765 288 aa14.02□□□□□ -0.17
VTI1B-204ENST00000554659 RCOR3Q9P2K3 495 aaPredicted RBP14.02□□□□□ -0.17
VTI1B-204ENST00000554659 ATXN10Q9UBB4 475 aa14.02□□□□□ -0.17
VTI1B-204ENST00000554659 BAZ2BQ9UIF8 2168 aaKnown RBP14.02□□□□□ -0.17
VTI1B-204ENST00000554659 EPHX2P34913 555 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 ARF5P84085 180 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 PTPRNQ16849 979 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 RAP1GAP2Q684P5 730 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 CCDC80Q76M96 950 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 STRADAQ7RTN6 431 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 CMC1Q7Z7K0 106 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 CDYL2Q8N8U2 506 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 RBM15BQ8NDT2 890 aaKnown RBP14.01□□□□□ -0.17
VTI1B-204ENST00000554659 ZNF180Q9UJW8 692 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 TDRKHQ9Y2W6 561 aaKnown RBP14.01□□□□□ -0.17
VTI1B-204ENST00000554659 A8MUI8 341 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 UMPSP11172 480 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 UGCGQ16739 394 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 METTL21CQ5VZV1 264 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 FGFBP2Q9BYJ0 223 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 DPP7Q9UHL4 492 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 RAB26Q9ULW5 256 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 ENTPD4Q9Y227 616 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 ANGPT4Q9Y264 503 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 LYVE1Q9Y5Y7 322 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.01□□□□□ -0.17
VTI1B-204ENST00000554659 AGPSO00116 658 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 SSNA1O43805 119 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 NRP2O60462 931 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 QPRTQ15274 297 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 MON1BQ7L1V2 547 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 CUZD1Q86UP6 607 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 TDRPQ86YL5 185 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 BORCS5Q969J3 196 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 YME1L1Q96TA2 773 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 SPG21Q9NZD8 308 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 SH3GLB1Q9Y371 365 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 TRAF6Q9Y4K3 522 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms