RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 ZSCAN30Q86W11 494 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 CXorf67Q86X51 503 aaPredicted RBP6.52□□□□□ -1.37
SCFD1-212ENST00000554486 PHYKPLQ8IUZ5 450 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 LYSMD2Q8IV50 215 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 ZDHHC14Q8IZN3 488 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 ELMOD1Q8N336 334 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 ARHGAP18Q8N392 663 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 RNF10Q8N5U6 811 aaKnown RBP6.52□□□□□ -1.37
SCFD1-212ENST00000554486 DEFB123Q8N688 67 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 ARFGAP1Q8N6T3 406 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 NIPA2Q8N8Q9 360 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 LRRC57Q8N9N7 239 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 OVCA2Q8WZ82 227 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 SMG7Q92540 1137 aaKnown RBP6.52□□□□□ -1.37
SCFD1-212ENST00000554486 CENPIQ92674 756 aaPredicted RBP6.52□□□□□ -1.37
SCFD1-212ENST00000554486 NT5C3BQ969T7 300 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 TCEAL4Q96EI5 215 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 MSLNLQ96KJ4 702 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 CFAP57Q96MR6 1250 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 SLITRK1Q96PX8 696 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 NPY6RQ99463 290 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 CNPY3Q9BT09 278 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 APOL5Q9BWW9 433 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 RAB6CQ9H0N0 254 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 S1PR5Q9H228 398 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 GOLPH3Q9H4A6 298 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 ASAH2Q9NR71 780 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 TLR8Q9NR97 1041 aaKnown RBP6.52□□□□□ -1.37
SCFD1-212ENST00000554486 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.52□□□□□ -1.37
SCFD1-212ENST00000554486 MTMR10Q9NXD2 777 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.52□□□□□ -1.37
SCFD1-212ENST00000554486 CLIC5Q9NZA1 410 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 EHD2Q9NZN4 543 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 TRPM5Q9NZQ8 1165 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 NTMQ9P121 344 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 CALCOCO1Q9P1Z2 691 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 UXTQ9UBK9 157 aaPredicted RBP6.52□□□□□ -1.37
SCFD1-212ENST00000554486 CDH22Q9UJ99 828 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 EYSQ5T1H1 3165 aa6.52□□□□□ -1.37
SCFD1-212ENST00000554486 HELZP42694 1942 aaKnown RBP6.52□□□□□ -1.37
SCFD1-212ENST00000554486 SPTBN5Q9NRC6 3674 aaKnown RBP6.52□□□□□ -1.37
SCFD1-212ENST00000554486 DENND4AQ7Z401 1863 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 C2orf78A6NCI8 922 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 GOLGA6L9A6NEM1 432 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 TMEM110-MUSTN1A8MSY1 372 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 ALG1L2C9J202 215 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 MYO1FO00160 1098 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 MDM4O15151 490 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 CCP110O43303 1012 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 COCHO43405 550 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 NCK2O43639 380 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 KDM1AO60341 852 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 TLR5O60602 858 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 PALMO75781 387 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 PROSCO94903 275 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 ENDOD1O94919 500 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 RALAP11233 206 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 GJA1P17302 382 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 HOXB8P17481 243 aaPredicted RBP6.51□□□□□ -1.37
SCFD1-212ENST00000554486 PTPN2P17706 415 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 GPD1P21695 349 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 PSMA2P25787 234 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 CDC25CP30307 473 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 SDC4P31431 198 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 PTPN9P43378 593 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 PPP3CCP48454 512 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 ATXN1P54253 815 aaKnown RBP6.51□□□□□ -1.37
SCFD1-212ENST00000554486 MANFP55145 182 aaKnown RBP6.51□□□□□ -1.37
SCFD1-212ENST00000554486 HDAC4P56524 1084 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 EIF4EBP2Q13542 120 aaPredicted RBP6.51□□□□□ -1.37
SCFD1-212ENST00000554486 SLC25A52Q3SY17 297 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 PABPC1LQ4VXU2 614 aaKnown RBP6.51□□□□□ -1.37
SCFD1-212ENST00000554486 STXBP5Q5T5C0 1151 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 DAB2IPQ5VWQ8 1189 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 TXNDC8Q6A555 127 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 C11orf63Q6NUN7 778 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 FRMD7Q6ZUT3 714 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 PDZD4Q76G19 769 aaPredicted RBP6.51□□□□□ -1.37
SCFD1-212ENST00000554486 SLFN11Q7Z7L1 901 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 GPR149Q86SP6 731 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 TAC4Q86UU9 113 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 ZNF276Q8N554 614 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 ITFG1Q8TB96 612 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 DQX1Q8TE96 717 aaKnown RBP6.51□□□□□ -1.37
SCFD1-212ENST00000554486 PABPC5Q96DU9 382 aaKnown RBP6.51□□□□□ -1.37
SCFD1-212ENST00000554486 TUBGCP5Q96RT8 1024 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 SLC22A12Q96S37 553 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 TBCBQ99426 244 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 SPATA25Q9BR10 227 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 ASPSCR1Q9BZE9 553 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 SMOC2Q9H3U7 446 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 ABCC13Q9NSE7 274 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 C14orf119Q9NWQ9 140 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 USP36Q9P275 1121 aaKnown RBP6.51□□□□□ -1.37
SCFD1-212ENST00000554486 IP6K2Q9UHH9 426 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 HYOU1Q9Y4L1 999 aa6.51□□□□□ -1.37
SCFD1-212ENST00000554486 NUP210Q8TEM1 1887 aaPredicted RBP6.5□□□□□ -1.37
SCFD1-212ENST00000554486 PRSS38A1L453 326 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 M0QYT0 321 aa6.5□□□□□ -1.37
SCFD1-212ENST00000554486 ZNF197O14709 1029 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms