RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 GYG2O15488 501 aa11.77□□□□□ -0.52
SHMT2-212ENST00000554467 HAUS5O94927 633 aa11.77□□□□□ -0.52
SHMT2-212ENST00000554467 ABLIM3O94929 683 aa11.77□□□□□ -0.52
SHMT2-212ENST00000554467 PTPN4P29074 926 aa11.77□□□□□ -0.52
SHMT2-212ENST00000554467 SLC11A2P49281 568 aa11.77□□□□□ -0.52
SHMT2-212ENST00000554467 DSG1Q02413 1049 aa11.77□□□□□ -0.52
SHMT2-212ENST00000554467 USP10Q14694 798 aaKnown RBP11.77□□□□□ -0.52
SHMT2-212ENST00000554467 PCLAFQ15004 111 aa11.77□□□□□ -0.52
SHMT2-212ENST00000554467 LIN52Q52LA3 116 aa11.77□□□□□ -0.52
SHMT2-212ENST00000554467 SIRPB2Q5JXA9 342 aa11.77□□□□□ -0.52
SHMT2-212ENST00000554467 ARL14EPQ8N8R7 260 aaPredicted RBP11.77□□□□□ -0.52
SHMT2-212ENST00000554467 ARRDC2Q8TBH0 407 aa11.77□□□□□ -0.52
SHMT2-212ENST00000554467 AGO1Q9UL18 857 aaKnown RBP11.77□□□□□ -0.52
SHMT2-212ENST00000554467 FNDC3AQ9Y2H6 1198 aaKnown RBP11.77□□□□□ -0.52
SHMT2-212ENST00000554467 SLC4A7Q9Y6M7 1214 aa11.77□□□□□ -0.52
SHMT2-212ENST00000554467 MBL2P11226 248 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-212ENST00000554467 BMP1P13497 986 aa11.77□□□□□ -0.53
SHMT2-212ENST00000554467 FUT4P22083 530 aa11.77□□□□□ -0.53
SHMT2-212ENST00000554467 ARRB2P32121 409 aa11.77□□□□□ -0.53
SHMT2-212ENST00000554467 ARCN1P48444 511 aaKnown RBP11.77□□□□□ -0.53
SHMT2-212ENST00000554467 ARSDP51689 593 aa11.77□□□□□ -0.53
SHMT2-212ENST00000554467 CYP4F8P98187 520 aa11.77□□□□□ -0.53
SHMT2-212ENST00000554467 PLOD1Q02809 727 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-212ENST00000554467 ZC3HC1Q86WB0 502 aaKnown RBP11.77□□□□□ -0.53
SHMT2-212ENST00000554467 OR6P1Q8NGX9 317 aa11.77□□□□□ -0.53
SHMT2-212ENST00000554467 RILPQ96NA2 401 aa11.77□□□□□ -0.53
SHMT2-212ENST00000554467 PLK2Q9NYY3 685 aa11.77□□□□□ -0.53
SHMT2-212ENST00000554467 GLRA3O75311 464 aa11.77□□□□□ -0.53
SHMT2-212ENST00000554467 PSMG1O95456 288 aa11.77□□□□□ -0.53
SHMT2-212ENST00000554467 DLDP09622 509 aaKnown RBP11.77□□□□□ -0.53
SHMT2-212ENST00000554467 HOXD9P28356 352 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-212ENST00000554467 SERPINB8P50452 374 aa11.77□□□□□ -0.53
SHMT2-212ENST00000554467 RASSF2P50749 326 aa11.77□□□□□ -0.53
SHMT2-212ENST00000554467 SMAD3P84022 425 aaKnown RBP11.77□□□□□ -0.53
SHMT2-212ENST00000554467 GNA12Q03113 381 aa11.77□□□□□ -0.53
SHMT2-212ENST00000554467 KDSRQ06136 332 aa11.77□□□□□ -0.53
SHMT2-212ENST00000554467 THOC5Q13769 683 aaKnown RBP11.77□□□□□ -0.53
SHMT2-212ENST00000554467 ITGA9Q13797 1035 aa11.77□□□□□ -0.53
SHMT2-212ENST00000554467 PDPK2PQ6A1A2 396 aa11.77□□□□□ -0.53
SHMT2-212ENST00000554467 CLNKQ7Z7G1 428 aa11.77□□□□□ -0.53
SHMT2-212ENST00000554467 TMEM150AQ86TG1 271 aa11.77□□□□□ -0.53
SHMT2-212ENST00000554467 CEP97Q8IW35 865 aa11.77□□□□□ -0.53
SHMT2-212ENST00000554467 ZNF689Q96CS4 500 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-212ENST00000554467 SMG9Q9H0W8 520 aaKnown RBP11.77□□□□□ -0.53
SHMT2-212ENST00000554467 ARL8BQ9NVJ2 186 aa11.77□□□□□ -0.53
SHMT2-212ENST00000554467 SPG21Q9NZD8 308 aa11.77□□□□□ -0.53
SHMT2-212ENST00000554467 HBS1LQ9Y450 684 aaKnown RBP11.77□□□□□ -0.53
SHMT2-212ENST00000554467 ARL5AQ9Y689 179 aa11.77□□□□□ -0.53
SHMT2-212ENST00000554467 TK2O00142 265 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 PSMD3O43242 534 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 SNAP91O60641 907 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 PRAMEF11O60813 436 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 PROCP04070 461 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 ASLP04424 464 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 CCR10P46092 362 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 SERPINH1P50454 418 aaKnown RBP11.76□□□□□ -0.53
SHMT2-212ENST00000554467 STX3Q13277 289 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 HSF5Q4G112 596 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-212ENST00000554467 FSCBQ5H9T9 825 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 STXBP5Q5T5C0 1151 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 CNSTQ6PJW8 725 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 KCTD4Q8WVF5 259 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 ZNF184Q99676 751 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-212ENST00000554467 SHCBP1LQ9BZQ2 653 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 H3BNC9 293 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 RNASEH1O60930 286 aaKnown RBP11.76□□□□□ -0.53
SHMT2-212ENST00000554467 LMNAP02545 664 aaKnown RBP11.76□□□□□ -0.53
SHMT2-212ENST00000554467 ENO1P06733 434 aaKnown RBP11.76□□□□□ -0.53
SHMT2-212ENST00000554467 PRSS56P0CW18 603 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 ESRRAP11474 423 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-212ENST00000554467 FGF3P11487 239 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-212ENST00000554467 AQP5P55064 265 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 IL10RBQ08334 325 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 VEPH1Q14D04 833 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 DBN1Q16643 649 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 PARP15Q460N3 678 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 RBM20Q5T481 1227 aaKnown RBP11.76□□□□□ -0.53
SHMT2-212ENST00000554467 MBLAC2Q68D91 279 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 DNAJC14Q6Y2X3 702 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-212ENST00000554467 HS6ST3Q8IZP7 471 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 SGF29Q96ES7 293 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 DNAJC1Q96KC8 554 aaKnown RBP11.76□□□□□ -0.53
SHMT2-212ENST00000554467 MUC3BQ9H195 1237 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 C11orf49Q9H6J7 331 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 GSC2O15499 205 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 OR6B1O95007 311 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 NAB1Q13506 487 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 EML3Q32P44 896 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 SPRED2Q7Z698 418 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 CARNMT1Q8N4J0 409 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 SH3RF2Q8TEC5 729 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 PDCD6IPQ8WUM4 868 aaKnown RBP11.76□□□□□ -0.53
SHMT2-212ENST00000554467 ELMO2Q96JJ3 720 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 EBF4Q9BQW3 602 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 VCX3BQ9H321 246 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 TASP1Q9H6P5 420 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 ATP13A1Q9HD20 1204 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 VCX3AQ9NNX9 186 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 MKS1Q9NXB0 559 aa11.76□□□□□ -0.53
SHMT2-212ENST00000554467 DCDC2Q9UHG0 476 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms