RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 DDX3XO00571 662 aaKnown RBP eCLIP6.66□□□□□ -1.343e-31■■■■■ 27.5
SLIRP-203ENST00000554074 INSIG1O15503 277 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 PRPSAP2O60256 369 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 BUB1BO60566 1050 aaPredicted RBP6.66□□□□□ -1.34
SLIRP-203ENST00000554074 CSO75390 466 aaKnown RBP6.66□□□□□ -1.34
SLIRP-203ENST00000554074 GCATO75600 419 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 PALMO75781 387 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 RASGRP1O95267 797 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 PIGNO95427 931 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 FTLP02792 175 aaPredicted RBP6.66□□□□□ -1.34
SLIRP-203ENST00000554074 ANXA6P08133 673 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 HOXC4P09017 264 aaPredicted RBP6.66□□□□□ -1.34
SLIRP-203ENST00000554074 ALPIP09923 528 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 C6P13671 934 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 ERCC2P18074 760 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 HTR1BP28222 390 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 SERPINA4P29622 427 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 MIPP30301 263 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 HSPA9P38646 679 aaKnown RBP6.66□□□□□ -1.34
SLIRP-203ENST00000554074 EIF4A3P38919 411 aaKnown RBP6.66□□□□□ -1.34
SLIRP-203ENST00000554074 PAPOLAP51003 745 aaKnown RBP6.66□□□□□ -1.34
SLIRP-203ENST00000554074 RENBPP51606 427 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 HK3P52790 923 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 PCBP4P57723 403 aaKnown RBP6.66□□□□□ -1.34
SLIRP-203ENST00000554074 AP1S1P61966 158 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 POLR2LP62875 67 aaKnown RBP6.66□□□□□ -1.34
SLIRP-203ENST00000554074 IL10RBQ08334 325 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 MTM1Q13496 603 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 DPYSQ14117 519 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 NFATC4Q14934 902 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 IRF4Q15306 451 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 ELOCQ15369 112 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 NR0B2Q15466 257 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 DPYSL2Q16555 572 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 CA9Q16790 459 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 ISXQ2M1V0 245 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 WSCD2Q2TBF2 565 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 PRRT3Q5FWE3 981 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 CFAP58Q5T655 872 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 FAXCQ5TGI0 409 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 ERAP2Q6P179 960 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 GUSBP11Q6P575 273 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 EFL1Q7Z2Z2 1120 aaKnown RBP6.66□□□□□ -1.34
SLIRP-203ENST00000554074 ZNF571Q7Z3V5 609 aaPredicted RBP6.66□□□□□ -1.34
SLIRP-203ENST00000554074 SRLQ86TD4 932 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 ARHGAP12Q8IWW6 846 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 RBFAQ8N0V3 343 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 ZNF248Q8NDW4 579 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 MAPK15Q8TD08 544 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 LMX1AQ8TE12 382 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 HIC2Q96JB3 615 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 EXOC2Q96KP1 924 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 PSKH2Q96QS6 385 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 PEBP4Q96S96 227 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 KCTD15Q96SI1 283 aaPredicted RBP6.66□□□□□ -1.34
SLIRP-203ENST00000554074 WRAP53Q9BUR4 548 aaKnown RBP6.66□□□□□ -1.34
SLIRP-203ENST00000554074 SNRNP25Q9BV90 132 aaKnown RBP6.66□□□□□ -1.34
SLIRP-203ENST00000554074 SLC39A8Q9C0K1 460 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 ISCUQ9H1K1 167 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 DHX35Q9H5Z1 703 aaKnown RBP6.66□□□□□ -1.34
SLIRP-203ENST00000554074 HAUS4Q9H6D7 363 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 ZWILCHQ9H900 591 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 POLR1BQ9H9Y6 1135 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 MRPL47Q9HD33 250 aaKnown RBP6.66□□□□□ -1.34
SLIRP-203ENST00000554074 PCDH12Q9NPG4 1184 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 MBNL1Q9NR56 388 aaKnown RBP6.66□□□□□ -1.34
SLIRP-203ENST00000554074 KCTD5Q9NXV2 234 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 CNOT8Q9UFF9 292 aaKnown RBP6.66□□□□□ -1.34
SLIRP-203ENST00000554074 PNMA8BQ9ULN7 279 aaPredicted RBP6.66□□□□□ -1.34
SLIRP-203ENST00000554074 ATP8A1Q9Y2Q0 1164 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 PCDHB1Q9Y5F3 818 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 PCDHGA8Q9Y5G5 932 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 DGKBQ9Y6T7 804 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 ATMQ13315 3056 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 KALRNO60229 2985 aa6.66□□□□□ -1.34
SLIRP-203ENST00000554074 TEX51A0A1B0GUA7 166 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.65□□□□□ -1.34
SLIRP-203ENST00000554074 A0A1W2PQJ5 194 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 TMCO5BA8MYB1 307 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 H3BRJ5 948 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 NTN3O00634 580 aaPredicted RBP6.65□□□□□ -1.34
SLIRP-203ENST00000554074 TRAFD1O14545 582 aaPredicted RBP6.65□□□□□ -1.34
SLIRP-203ENST00000554074 TNFRSF10CO14798 259 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 YY2O15391 372 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 DAPK3O43293 454 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 ATMINO43313 823 aaPredicted RBP6.65□□□□□ -1.34
SLIRP-203ENST00000554074 CBFA2T2O43439 604 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 SOCS5O75159 536 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 USP12O75317 370 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 LRCH4O75427 683 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 TSHRP16473 764 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 ITIH2P19823 946 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 TGM2P21980 687 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 KELP23276 732 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 ITPKBP27987 946 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 TRIM23P36406 574 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 RGRP47804 291 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 LIG3P49916 1009 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 UCNP55089 124 aa6.65□□□□□ -1.34
SLIRP-203ENST00000554074 ADKP55263 362 aaKnown RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms