RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 A0A1W2PQ67 120 aa10.28□□□□□ -0.76
HNRNPC-208ENST00000553753 HTRA2O43464 458 aaPredicted RBP10.28□□□□□ -0.76
HNRNPC-208ENST00000553753 TNFSF14O43557 240 aa10.28□□□□□ -0.76
HNRNPC-208ENST00000553753 SOCS5O75159 536 aa10.28□□□□□ -0.76
HNRNPC-208ENST00000553753 PRKCGP05129 697 aa10.28□□□□□ -0.76
HNRNPC-208ENST00000553753 FTH1P19P0C7X4 201 aa10.28□□□□□ -0.76
HNRNPC-208ENST00000553753 TNNT1P13805 278 aa10.28□□□□□ -0.76
HNRNPC-208ENST00000553753 MMP12P39900 470 aa10.28□□□□□ -0.76
HNRNPC-208ENST00000553753 LIG3P49916 1009 aa10.28□□□□□ -0.76
HNRNPC-208ENST00000553753 PFN3P60673 137 aa10.28□□□□□ -0.76
HNRNPC-208ENST00000553753 SLC10A2Q12908 348 aaPredicted RBP10.28□□□□□ -0.76
HNRNPC-208ENST00000553753 PLD5Q8N7P1 536 aa10.28□□□□□ -0.76
HNRNPC-208ENST00000553753 PNPLA1Q8N8W4 532 aa10.28□□□□□ -0.76
HNRNPC-208ENST00000553753 CCNYQ8ND76 341 aa10.28□□□□□ -0.76
HNRNPC-208ENST00000553753 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.28□□□□□ -0.76
HNRNPC-208ENST00000553753 PDCD6IPQ8WUM4 868 aaKnown RBP10.28□□□□□ -0.76
HNRNPC-208ENST00000553753 MAML1Q92585 1016 aa10.28□□□□□ -0.76
HNRNPC-208ENST00000553753 FATE1Q969F0 183 aa10.28□□□□□ -0.76
HNRNPC-208ENST00000553753 RNF25Q96BH1 459 aaPredicted RBP10.28□□□□□ -0.76
HNRNPC-208ENST00000553753 IFT43Q96FT9 208 aa10.28□□□□□ -0.76
HNRNPC-208ENST00000553753 POLR1EQ9GZS1 481 aaKnown RBP10.28□□□□□ -0.76
HNRNPC-208ENST00000553753 NT5MQ9NPB1 228 aa10.28□□□□□ -0.76
HNRNPC-208ENST00000553753 APOBEC2Q9Y235 224 aaKnown RBP10.28□□□□□ -0.76
HNRNPC-208ENST00000553753 ARID1BQ8NFD5 2236 aaPredicted RBP10.28□□□□□ -0.76
HNRNPC-208ENST00000553753 CFAP69A5D8W1 941 aa10.27□□□□□ -0.77
HNRNPC-208ENST00000553753 SDC3O75056 442 aa10.27□□□□□ -0.77
HNRNPC-208ENST00000553753 TOP3BO95985 862 aaKnown RBP10.27□□□□□ -0.77
HNRNPC-208ENST00000553753 KRT1P04264 644 aa10.27□□□□□ -0.77
HNRNPC-208ENST00000553753 C6P13671 934 aa10.27□□□□□ -0.77
HNRNPC-208ENST00000553753 CCNB1P14635 433 aa10.27□□□□□ -0.77
HNRNPC-208ENST00000553753 SEMG2Q02383 582 aa10.27□□□□□ -0.77
HNRNPC-208ENST00000553753 ITKQ08881 620 aa10.27□□□□□ -0.77
HNRNPC-208ENST00000553753 PDE1CQ14123 709 aaPredicted RBP10.27□□□□□ -0.77
HNRNPC-208ENST00000553753 LRRC14Q15048 493 aa10.27□□□□□ -0.77
HNRNPC-208ENST00000553753 SLC9A4Q6AI14 798 aa10.27□□□□□ -0.77
HNRNPC-208ENST00000553753 KANSL1Q7Z3B3 1105 aa10.27□□□□□ -0.77
HNRNPC-208ENST00000553753 SLCO6A1Q86UG4 719 aa10.27□□□□□ -0.77
HNRNPC-208ENST00000553753 EID2Q8N6I1 236 aa10.27□□□□□ -0.77
HNRNPC-208ENST00000553753 TP53I13Q8NBR0 393 aaPredicted RBP10.27□□□□□ -0.77
HNRNPC-208ENST00000553753 LRRN4Q8WUT4 740 aa10.27□□□□□ -0.77
HNRNPC-208ENST00000553753 HDAC11Q96DB2 347 aa10.27□□□□□ -0.77
HNRNPC-208ENST00000553753 ZNF830Q96NB3 372 aaPredicted RBP10.27□□□□□ -0.77
HNRNPC-208ENST00000553753 SCNM1Q9BWG6 230 aa10.27□□□□□ -0.77
HNRNPC-208ENST00000553753 GOLPH3Q9H4A6 298 aa10.27□□□□□ -0.77
HNRNPC-208ENST00000553753 MBNL1Q9NR56 388 aaKnown RBP10.27□□□□□ -0.77
HNRNPC-208ENST00000553753 HAUS2Q9NVX0 235 aa10.27□□□□□ -0.77
HNRNPC-208ENST00000553753 RBM22Q9NW64 420 aaKnown RBP eCLIP10.27□□□□□ -0.774e-23■■■■■ 28.1
HNRNPC-208ENST00000553753 TOR4AQ9NXH8 423 aa10.27□□□□□ -0.77
HNRNPC-208ENST00000553753 IMPACTQ9P2X3 320 aa10.27□□□□□ -0.77
HNRNPC-208ENST00000553753 FTSJ1Q9UET6 329 aa10.27□□□□□ -0.77
HNRNPC-208ENST00000553753 AMACRQ9UHK6 382 aa10.27□□□□□ -0.77
HNRNPC-208ENST00000553753 COQ6Q9Y2Z9 468 aa10.27□□□□□ -0.77
HNRNPC-208ENST00000553753 HEY1Q9Y5J3 304 aa10.27□□□□□ -0.77
HNRNPC-208ENST00000553753 TDRD6O60522 2096 aaKnown RBP10.27□□□□□ -0.77
HNRNPC-208ENST00000553753 APOL1O14791 398 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 PSTPIP1O43586 416 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 HYAL3O43820 417 aaPredicted RBP10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 LZTS3O60299 673 aaPredicted RBP10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 ATXN1LP0C7T5 689 aaKnown RBP10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 ZFXP17010 805 aaPredicted RBP10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 SPINK2P20155 84 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 CES1P23141 567 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 DGKAP23743 735 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 NFKBIAP25963 317 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 CDC25BP30305 580 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 IGFALSP35858 605 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 THOP1P52888 689 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 YPEL5P62699 121 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 FZD2Q14332 565 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 AGERQ15109 404 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 WSCD2Q2TBF2 565 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 ZNF542PQ5EBM4 170 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 RAD9BQ6WBX8 426 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 KDM7AQ6ZMT4 941 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 PARGQ86W56 976 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 SLC25A45Q8N413 288 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 CHCHD4Q8N4Q1 142 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 ADAMTS14Q8WXS8 1223 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 LGMNQ99538 433 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 BAG1Q99933 345 aaPredicted RBP10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 SEMA3CQ99985 751 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 DNAJC28Q9NX36 388 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 SALL4Q9UJQ4 1053 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 PHTF1Q9UMS5 762 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 TTLL3Q9Y4R7 772 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 AKAP13Q12802 2813 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 RCCD1A6NED2 376 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 A8MX80 341 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 TOR1BO14657 336 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 PIAS2O75928 621 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 NEBLO76041 1014 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 LDOC1O95751 146 aaPredicted RBP10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 CSF2P04141 144 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 ELFN1P0C7U0 828 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 HNRNPKP61978 463 aaKnown RBP eCLIP10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 PPIDQ08752 370 aaKnown RBP10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 TRAF2Q12933 501 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 RALGDSQ12967 914 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 PTK2BQ14289 1009 aa10.26□□□□□ -0.77
HNRNPC-208ENST00000553753 PDK1Q15118 436 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms