RNA–Protein interactions for RNA: ENST00000553699.5

GSKIP-202, Transcript of GSK3B interacting protein, humanhuman

TSL 4

Gene GSKIP, Length 501 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSKIP-202ENST00000553699 HNF1BP35680 557 aa9.68□□□□□ -0.86
GSKIP-202ENST00000553699 CSNK1DP48730 415 aa9.68□□□□□ -0.86
GSKIP-202ENST00000553699 ACADVLP49748 655 aa9.68□□□□□ -0.86
GSKIP-202ENST00000553699 HNRNPKP61978 463 aaKnown RBP eCLIP9.68□□□□□ -0.86
GSKIP-202ENST00000553699 SLC25A11Q02978 314 aaKnown RBP9.68□□□□□ -0.86
GSKIP-202ENST00000553699 DNAJC3Q13217 504 aa9.68□□□□□ -0.86
GSKIP-202ENST00000553699 ZNF211Q13398 564 aaPredicted RBP9.68□□□□□ -0.86
GSKIP-202ENST00000553699 ILKQ13418 452 aa9.68□□□□□ -0.86
GSKIP-202ENST00000553699 SMAD1Q15797 465 aaKnown RBP9.68□□□□□ -0.86
GSKIP-202ENST00000553699 KRTAP21-3Q3LHN1 58 aa9.68□□□□□ -0.86
GSKIP-202ENST00000553699 TMCO4Q5TGY1 634 aa9.68□□□□□ -0.86
GSKIP-202ENST00000553699 SPECC1LQ69YQ0 1117 aa9.68□□□□□ -0.86
GSKIP-202ENST00000553699 ERAP2Q6P179 960 aa9.68□□□□□ -0.86
GSKIP-202ENST00000553699 DHRS13Q6UX07 377 aa9.68□□□□□ -0.86
GSKIP-202ENST00000553699 ZNF574Q6ZN55 896 aaPredicted RBP9.68□□□□□ -0.86
GSKIP-202ENST00000553699 NETO2Q8NC67 525 aa9.68□□□□□ -0.86
GSKIP-202ENST00000553699 TSEN2Q8NCE0 465 aaKnown RBP9.68□□□□□ -0.86
GSKIP-202ENST00000553699 OR4C6Q8NH72 309 aa9.68□□□□□ -0.86
GSKIP-202ENST00000553699 CTNNBL1Q8WYA6 563 aaPredicted RBP9.68□□□□□ -0.86
GSKIP-202ENST00000553699 TSC1Q92574 1164 aa9.68□□□□□ -0.86
GSKIP-202ENST00000553699 ZNF599Q96NL3 588 aa9.68□□□□□ -0.86
GSKIP-202ENST00000553699 CSPG4P5Q96PW8 444 aa9.68□□□□□ -0.86
GSKIP-202ENST00000553699 TSPY26PQ9H489 355 aa9.68□□□□□ -0.86
GSKIP-202ENST00000553699 SUV39H2Q9H5I1 410 aa9.68□□□□□ -0.86
GSKIP-202ENST00000553699 ATP13A3Q9H7F0 1226 aa9.68□□□□□ -0.86
GSKIP-202ENST00000553699 IPO11Q9UI26 975 aaKnown RBP9.68□□□□□ -0.86
GSKIP-202ENST00000553699 PLXNB3Q9ULL4 1909 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 SPTY2D1-AS1A0A0U1RR47 76 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 NEMP2A6NFY4 417 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 TOR1BO14657 336 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 MMP20O60882 483 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 CSF2P04141 144 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 RARAP10276 462 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 NME1P15531 152 aaKnown RBP9.67□□□□□ -0.86
GSKIP-202ENST00000553699 TIMP2P16035 220 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 CKMT2P17540 419 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 ACP1P24666 158 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 IGFALSP35858 605 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 HSPA9P38646 679 aaKnown RBP9.67□□□□□ -0.86
GSKIP-202ENST00000553699 SSR1P43307 286 aaKnown RBP9.67□□□□□ -0.86
GSKIP-202ENST00000553699 RGRP47804 291 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 RENBPP51606 427 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 THOP1P52888 689 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 PFN3P60673 137 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 AP1S1P61966 158 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 BCL2L1Q07817 233 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 PDE1CQ14123 709 aaPredicted RBP9.67□□□□□ -0.86
GSKIP-202ENST00000553699 PTK2BQ14289 1009 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 FZD2Q14332 565 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 KRT81Q14533 505 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 ZNF235Q14590 738 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 LBRQ14739 615 aaKnown RBP9.67□□□□□ -0.86
GSKIP-202ENST00000553699 SLC18A3Q16572 532 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 HADHQ16836 314 aaKnown RBP9.67□□□□□ -0.86
GSKIP-202ENST00000553699 UGP2Q16851 508 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 PROX2Q3B8N5 592 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 TMEM52BQ4KMG9 183 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 ARHGAP36Q6ZRI8 547 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 POLNQ7Z5Q5 900 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 SRLQ86TD4 932 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 TMPRSS12Q86WS5 348 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 BBS5Q8N3I7 341 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 SLC25A45Q8N413 288 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 PAF1Q8N7H5 531 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 ZNF564Q8TBZ8 553 aaPredicted RBP9.67□□□□□ -0.86
GSKIP-202ENST00000553699 CENPTQ96BT3 561 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 BTBD6Q96KE9 485 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 PSKH2Q96QS6 385 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 WRAP53Q9BUR4 548 aaKnown RBP9.67□□□□□ -0.86
GSKIP-202ENST00000553699 DUSP23Q9BVJ7 150 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 DEF6Q9H4E7 631 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 PCDH18Q9HCL0 1135 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 EVA1BQ9NVM1 165 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 ZNHIT6Q9NWK9 470 aaKnown RBP9.67□□□□□ -0.86
GSKIP-202ENST00000553699 UCKL1Q9NWZ5 548 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 NLGN3Q9NZ94 848 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 RCOR3Q9P2K3 495 aaPredicted RBP9.67□□□□□ -0.86
GSKIP-202ENST00000553699 UVRAGQ9P2Y5 699 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 SEPT3Q9UH03 358 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 LCMT1Q9UIC8 334 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 NENFQ9UMX5 172 aa9.67□□□□□ -0.86
GSKIP-202ENST00000553699 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.66□□□□□ -0.86
GSKIP-202ENST00000553699 SSU72P8A0A1W2PR75 194 aa9.66□□□□□ -0.86
GSKIP-202ENST00000553699 TRABD2BA6NFA1 517 aa9.66□□□□□ -0.86
GSKIP-202ENST00000553699 TRIM38O00635 465 aa9.66□□□□□ -0.86
GSKIP-202ENST00000553699 RIOK3O14730 519 aaKnown RBP9.66□□□□□ -0.86
GSKIP-202ENST00000553699 FFAR2O15552 330 aa9.66□□□□□ -0.86
GSKIP-202ENST00000553699 SIGLEC6O43699 453 aa9.66□□□□□ -0.86
GSKIP-202ENST00000553699 H2AFZP0C0S5 128 aa9.66□□□□□ -0.86
GSKIP-202ENST00000553699 AMPD1P23109 780 aa9.66□□□□□ -0.86
GSKIP-202ENST00000553699 EIF4A3P38919 411 aaKnown RBP9.66□□□□□ -0.86
GSKIP-202ENST00000553699 MMP12P39900 470 aa9.66□□□□□ -0.86
GSKIP-202ENST00000553699 CDH6P55285 790 aa9.66□□□□□ -0.86
GSKIP-202ENST00000553699 YPEL5P62699 121 aa9.66□□□□□ -0.86
GSKIP-202ENST00000553699 POLR2LP62875 67 aaKnown RBP9.66□□□□□ -0.86
GSKIP-202ENST00000553699 DAB2P98082 770 aa9.66□□□□□ -0.86
GSKIP-202ENST00000553699 NSUN2Q08J23 767 aaKnown RBP eCLIP9.66□□□□□ -0.86
GSKIP-202ENST00000553699 TSR1Q2NL82 804 aaKnown RBP9.66□□□□□ -0.86
GSKIP-202ENST00000553699 ZNF542PQ5EBM4 170 aa9.66□□□□□ -0.86
GSKIP-202ENST00000553699 TXNRD3NBQ6F5E7 133 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms