RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 SERPINC1P01008 464 aa11.96□□□□□ -0.49
SRP54-203ENST00000553544 ITGB7P26010 798 aa11.96□□□□□ -0.49
SRP54-203ENST00000553544 ACVRL1P37023 503 aa11.96□□□□□ -0.49
SRP54-203ENST00000553544 DNA2P51530 1060 aa11.96□□□□□ -0.49
SRP54-203ENST00000553544 AIF1P55008 147 aa11.96□□□□□ -0.49
SRP54-203ENST00000553544 PFN3P60673 137 aa11.96□□□□□ -0.49
SRP54-203ENST00000553544 FANCCQ00597 558 aa11.96□□□□□ -0.49
SRP54-203ENST00000553544 MAMLD1Q13495 774 aa11.96□□□□□ -0.49
SRP54-203ENST00000553544 ASIC2Q16515 512 aa11.96□□□□□ -0.49
SRP54-203ENST00000553544 FAXCQ5TGI0 409 aa11.96□□□□□ -0.49
SRP54-203ENST00000553544 RETSATQ6NUM9 610 aa11.96□□□□□ -0.49
SRP54-203ENST00000553544 C22orf39Q6P5X5 142 aa11.96□□□□□ -0.49
SRP54-203ENST00000553544 SLFN11Q7Z7L1 901 aa11.96□□□□□ -0.49
SRP54-203ENST00000553544 DRC7Q8IY82 874 aa11.96□□□□□ -0.49
SRP54-203ENST00000553544 PYROXD2Q8N2H3 581 aa11.96□□□□□ -0.49
SRP54-203ENST00000553544 ARHGEF2Q92974 986 aaKnown RBP11.96□□□□□ -0.49
SRP54-203ENST00000553544 RAB7BQ96AH8 199 aa11.96□□□□□ -0.49
SRP54-203ENST00000553544 TBC1D31Q96DN5 1066 aa11.96□□□□□ -0.49
SRP54-203ENST00000553544 TBATAQ96M53 351 aa11.96□□□□□ -0.49
SRP54-203ENST00000553544 MCEEQ96PE7 176 aa11.96□□□□□ -0.49
SRP54-203ENST00000553544 GFM1Q96RP9 751 aaKnown RBP11.96□□□□□ -0.49
SRP54-203ENST00000553544 HEPHQ9BQS7 1158 aa11.96□□□□□ -0.49
SRP54-203ENST00000553544 SPON2Q9BUD6 331 aa11.96□□□□□ -0.49
SRP54-203ENST00000553544 ATP13A1Q9HD20 1204 aa11.96□□□□□ -0.49
SRP54-203ENST00000553544 GULP1Q9UBP9 304 aa11.96□□□□□ -0.49
SRP54-203ENST00000553544 APOBEC3BQ9UH17 382 aaKnown RBP11.96□□□□□ -0.49
SRP54-203ENST00000553544 FZD10Q9ULW2 581 aa11.96□□□□□ -0.49
SRP54-203ENST00000553544 DOLKQ9UPQ8 538 aa11.96□□□□□ -0.49
SRP54-203ENST00000553544 PCDHB11Q9Y5F2 797 aa11.96□□□□□ -0.49
SRP54-203ENST00000553544 WASF2Q9Y6W5 498 aa11.96□□□□□ -0.49
SRP54-203ENST00000553544 TRPM6Q9BX84 2022 aa11.96□□□□□ -0.5
SRP54-203ENST00000553544 RP1P56715 2156 aa11.95□□□□□ -0.5
SRP54-203ENST00000553544 TEX15Q9BXT5 2789 aa11.95□□□□□ -0.5
SRP54-203ENST00000553544 TMCO5BA8MYB1 307 aa11.95□□□□□ -0.5
SRP54-203ENST00000553544 CASC3O15234 703 aaKnown RBP11.95□□□□□ -0.5
SRP54-203ENST00000553544 TPM3P06753 285 aa11.95□□□□□ -0.5
SRP54-203ENST00000553544 JMJD7P0C870 316 aa11.95□□□□□ -0.5
SRP54-203ENST00000553544 LIPCP11150 499 aa11.95□□□□□ -0.5
SRP54-203ENST00000553544 ETFBP38117 255 aa11.95□□□□□ -0.5
SRP54-203ENST00000553544 SERPINH1P50454 418 aaKnown RBP11.95□□□□□ -0.5
SRP54-203ENST00000553544 PDX1P52945 283 aa11.95□□□□□ -0.5
SRP54-203ENST00000553544 UBAP2LQ14157 1087 aaKnown RBP11.95□□□□□ -0.5
SRP54-203ENST00000553544 TBR1Q16650 682 aa11.95□□□□□ -0.5
SRP54-203ENST00000553544 CARD16Q5EG05 197 aa11.95□□□□□ -0.5
SRP54-203ENST00000553544 MANEAQ5SRI9 462 aa11.95□□□□□ -0.5
SRP54-203ENST00000553544 TPRG1LQ5T0D9 272 aa11.95□□□□□ -0.5
SRP54-203ENST00000553544 RWDD4Q6NW29 188 aaKnown RBP11.95□□□□□ -0.5
SRP54-203ENST00000553544 DCUN1D2Q6PH85 259 aa11.95□□□□□ -0.5
SRP54-203ENST00000553544 LVRNQ6Q4G3 990 aa11.95□□□□□ -0.5
SRP54-203ENST00000553544 DNAAF5Q86Y56 855 aa11.95□□□□□ -0.5
SRP54-203ENST00000553544 PLPP6Q8IY26 295 aa11.95□□□□□ -0.5
SRP54-203ENST00000553544 PHACTR4Q8IZ21 702 aa11.95□□□□□ -0.5
SRP54-203ENST00000553544 RBFAQ8N0V3 343 aa11.95□□□□□ -0.5
SRP54-203ENST00000553544 ARFGAP1Q8N6T3 406 aa11.95□□□□□ -0.5
SRP54-203ENST00000553544 DENND6BQ8NEG7 585 aa11.95□□□□□ -0.5
SRP54-203ENST00000553544 VOPP1Q96AW1 172 aa11.95□□□□□ -0.5
SRP54-203ENST00000553544 ISG20Q96AZ6 181 aaKnown RBP11.95□□□□□ -0.5
SRP54-203ENST00000553544 TMEM74Q96NL1 305 aa11.95□□□□□ -0.5
SRP54-203ENST00000553544 CEP44Q9C0F1 390 aa11.95□□□□□ -0.5
SRP54-203ENST00000553544 SLC25A18Q9H1K4 315 aa11.95□□□□□ -0.5
SRP54-203ENST00000553544 MAGEH1Q9H213 219 aa11.95□□□□□ -0.5
SRP54-203ENST00000553544 PARVAQ9NVD7 372 aa11.95□□□□□ -0.5
SRP54-203ENST00000553544 ANKMY1Q9P2S6 941 aa11.95□□□□□ -0.5
SRP54-203ENST00000553544 DNAI1Q9UI46 699 aa11.95□□□□□ -0.5
SRP54-203ENST00000553544 ACTL7AQ9Y615 435 aa11.95□□□□□ -0.5
SRP54-203ENST00000553544 A0A1W2PQJ5 194 aa11.94□□□□□ -0.5
SRP54-203ENST00000553544 ANKRD62A6NC57 917 aa11.94□□□□□ -0.5
SRP54-203ENST00000553544 TMEM191CA6NGB0 347 aa11.94□□□□□ -0.5
SRP54-203ENST00000553544 WASH4PA8MWX3 477 aa11.94□□□□□ -0.5
SRP54-203ENST00000553544 TOR1BO14657 336 aa11.94□□□□□ -0.5
SRP54-203ENST00000553544 PPFIA2O75334 1257 aa11.94□□□□□ -0.5
SRP54-203ENST00000553544 FTLP02792 175 aaPredicted RBP11.94□□□□□ -0.5
SRP54-203ENST00000553544 SKILP12757 684 aa11.94□□□□□ -0.5
SRP54-203ENST00000553544 TSHRP16473 764 aa11.94□□□□□ -0.5
SRP54-203ENST00000553544 BLKP51451 505 aa11.94□□□□□ -0.5
SRP54-203ENST00000553544 UBASH3AP57075 661 aa11.94□□□□□ -0.5
SRP54-203ENST00000553544 YPEL5P62699 121 aa11.94□□□□□ -0.5
SRP54-203ENST00000553544 CCL7P80098 99 aa11.94□□□□□ -0.5
SRP54-203ENST00000553544 PPARDQ03181 441 aa11.94□□□□□ -0.5
SRP54-203ENST00000553544 KLHL30Q0D2K2 578 aa11.94□□□□□ -0.5
SRP54-203ENST00000553544 ELOCQ15369 112 aa11.94□□□□□ -0.5
SRP54-203ENST00000553544 KIF26BQ2KJY2 2108 aa11.94□□□□□ -0.5
SRP54-203ENST00000553544 EFHC2Q5JST6 749 aa11.94□□□□□ -0.5
SRP54-203ENST00000553544 HGSNATQ68CP4 663 aa11.94□□□□□ -0.5
SRP54-203ENST00000553544 SCYL2Q6P3W7 929 aa11.94□□□□□ -0.5
SRP54-203ENST00000553544 B3GNT8Q7Z7M8 397 aa11.94□□□□□ -0.5
SRP54-203ENST00000553544 FSTL5Q8N475 847 aaPredicted RBP11.94□□□□□ -0.5
SRP54-203ENST00000553544 PCDH20Q8N6Y1 951 aaKnown RBP11.94□□□□□ -0.5
SRP54-203ENST00000553544 ARL10Q8N8L6 244 aa11.94□□□□□ -0.5
SRP54-203ENST00000553544 RTL3Q8N8U3 475 aaKnown RBP11.94□□□□□ -0.5
SRP54-203ENST00000553544 OR6C4Q8NGE1 309 aa11.94□□□□□ -0.5
SRP54-203ENST00000553544 FNIP1Q8TF40 1166 aa11.94□□□□□ -0.5
SRP54-203ENST00000553544 TMEM159Q96B96 161 aa11.94□□□□□ -0.5
SRP54-203ENST00000553544 CENPTQ96BT3 561 aa11.94□□□□□ -0.5
SRP54-203ENST00000553544 FOXP3Q9BZS1 431 aa11.94□□□□□ -0.5
SRP54-203ENST00000553544 ISCUQ9H1K1 167 aa11.94□□□□□ -0.5
SRP54-203ENST00000553544 TCEAL2Q9H3H9 227 aaPredicted RBP11.94□□□□□ -0.5
SRP54-203ENST00000553544 NOL6Q9H6R4 1146 aaKnown RBP11.94□□□□□ -0.5
SRP54-203ENST00000553544 GEMIN8Q9NWZ8 242 aaKnown RBP11.94□□□□□ -0.5
SRP54-203ENST00000553544 HECAQ9UBI9 543 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms