RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 ZNF362Q5T0B9 420 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-209ENST00000553280 PMS2CLQ68D20 193 aa5.23□□□□□ -1.57
SCFD1-209ENST00000553280 SERPINA11Q86U17 422 aa5.23□□□□□ -1.57
SCFD1-209ENST00000553280 DNAAF5Q86Y56 855 aa5.23□□□□□ -1.57
SCFD1-209ENST00000553280 LINC00346Q8IVM7 164 aa5.23□□□□□ -1.57
SCFD1-209ENST00000553280 SYT2Q8N9I0 419 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-209ENST00000553280 AVL9Q8NBF6 648 aa5.23□□□□□ -1.57
SCFD1-209ENST00000553280 OSR1Q8TAX0 266 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-209ENST00000553280 SNAPC3Q92966 411 aa5.23□□□□□ -1.57
SCFD1-209ENST00000553280 FIZ1Q96SL8 496 aa5.23□□□□□ -1.57
SCFD1-209ENST00000553280 APOL6Q9BWW8 343 aa5.23□□□□□ -1.57
SCFD1-209ENST00000553280 NDST4Q9H3R1 872 aa5.23□□□□□ -1.57
SCFD1-209ENST00000553280 RABEP2Q9H5N1 569 aa5.23□□□□□ -1.57
SCFD1-209ENST00000553280 ARPP21Q9UBL0 812 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-209ENST00000553280 SEC63Q9UGP8 760 aaKnown RBP5.23□□□□□ -1.57
SCFD1-209ENST00000553280 TYW5A2RUC4 315 aaKnown RBP5.22□□□□□ -1.57
SCFD1-209ENST00000553280 GLOD5A6NK44 160 aa5.22□□□□□ -1.57
SCFD1-209ENST00000553280 HSPB2A8KAH6 182 aa5.22□□□□□ -1.57
SCFD1-209ENST00000553280 HS6ST1O60243 411 aa5.22□□□□□ -1.57
SCFD1-209ENST00000553280 NKX2-2O95096 273 aa5.22□□□□□ -1.57
SCFD1-209ENST00000553280 TOP3BO95985 862 aaKnown RBP5.22□□□□□ -1.57
SCFD1-209ENST00000553280 UNGP13051 313 aaPredicted RBP5.22□□□□□ -1.57
SCFD1-209ENST00000553280 EPHB2P29323 1055 aa5.22□□□□□ -1.57
SCFD1-209ENST00000553280 CIITAP33076 1130 aa5.22□□□□□ -1.57
SCFD1-209ENST00000553280 SHMT1P34896 483 aa5.22□□□□□ -1.57
SCFD1-209ENST00000553280 GRIK3Q13003 919 aa5.22□□□□□ -1.57
SCFD1-209ENST00000553280 IKQ13123 557 aaPredicted RBP5.22□□□□□ -1.57
SCFD1-209ENST00000553280 PLCB4Q15147 1175 aa5.22□□□□□ -1.57
SCFD1-209ENST00000553280 ADIPOQQ15848 244 aa5.22□□□□□ -1.57
SCFD1-209ENST00000553280 HSPB2Q16082 182 aa5.22□□□□□ -1.57
SCFD1-209ENST00000553280 TCTN1Q2MV58 587 aa5.22□□□□□ -1.57
SCFD1-209ENST00000553280 PLEKHO1Q53GL0 409 aaPredicted RBP5.22□□□□□ -1.57
SCFD1-209ENST00000553280 ALG10Q5BKT4 473 aa5.22□□□□□ -1.57
SCFD1-209ENST00000553280 ALG10BQ5I7T1 473 aa5.22□□□□□ -1.57
SCFD1-209ENST00000553280 NCAPH2Q6IBW4 605 aa5.22□□□□□ -1.57
SCFD1-209ENST00000553280 CRELD2Q6UXH1 353 aaPredicted RBP5.22□□□□□ -1.57
SCFD1-209ENST00000553280 VSIG1Q86XK7 387 aa5.22□□□□□ -1.57
SCFD1-209ENST00000553280 LURAP1LQ8IV03 231 aa5.22□□□□□ -1.57
SCFD1-209ENST00000553280 ADGRF4Q8IZF3 695 aa5.22□□□□□ -1.57
SCFD1-209ENST00000553280 FAM185AQ8N0U4 392 aa5.22□□□□□ -1.57
SCFD1-209ENST00000553280 ZCCHC9Q8N567 271 aaKnown RBP5.22□□□□□ -1.57
SCFD1-209ENST00000553280 IL17RCQ8NAC3 791 aa5.22□□□□□ -1.57
SCFD1-209ENST00000553280 POMGNT2Q8NAT1 580 aa5.22□□□□□ -1.57
SCFD1-209ENST00000553280 C8orf58Q8NAV2 365 aa5.22□□□□□ -1.57
SCFD1-209ENST00000553280 CMASQ8NFW8 434 aaPredicted RBP5.22□□□□□ -1.57
SCFD1-209ENST00000553280 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.22□□□□□ -1.57
SCFD1-209ENST00000553280 RNF183Q96D59 192 aa5.22□□□□□ -1.57
SCFD1-209ENST00000553280 GCNAQ96QF7 691 aa5.22□□□□□ -1.57
SCFD1-209ENST00000553280 SIN3AQ96ST3 1273 aa5.22□□□□□ -1.57
SCFD1-209ENST00000553280 SRSF8Q9BRL6 282 aaKnown RBP5.22□□□□□ -1.57
SCFD1-209ENST00000553280 ALDH8A1Q9H2A2 487 aaPredicted RBP5.22□□□□□ -1.57
SCFD1-209ENST00000553280 RIOX1Q9H6W3 641 aa5.22□□□□□ -1.57
SCFD1-209ENST00000553280 LTB4R2Q9NPC1 389 aa5.22□□□□□ -1.57
SCFD1-209ENST00000553280 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.22□□□□□ -1.57
SCFD1-209ENST00000553280 SEMA4GQ9NTN9 838 aa5.22□□□□□ -1.57
SCFD1-209ENST00000553280 RNF146Q9NTX7 359 aa5.22□□□□□ -1.57
SCFD1-209ENST00000553280 SEL1LQ9UBV2 794 aa5.22□□□□□ -1.57
SCFD1-209ENST00000553280 PLEKHB1Q9UF11 243 aaPredicted RBP5.22□□□□□ -1.57
SCFD1-209ENST00000553280 UTS2RQ9UKP6 389 aa5.22□□□□□ -1.57
SCFD1-209ENST00000553280 ZNF335Q9H4Z2 1342 aaPredicted RBP5.22□□□□□ -1.57
SCFD1-209ENST00000553280 RHODO00212 210 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 PRPF4O43172 522 aaKnown RBP eCLIP5.21□□□□□ -1.58
SCFD1-209ENST00000553280 TBX10O75333 385 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 SRPRAP08240 638 aaKnown RBP5.21□□□□□ -1.58
SCFD1-209ENST00000553280 AGAP20933 346 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 PIK3CAP42336 1068 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 CXCR3P49682 368 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 GALCP54803 685 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 UBXN2AP68543 259 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 MRPS5P82675 430 aaKnown RBP5.21□□□□□ -1.58
SCFD1-209ENST00000553280 ZBED6P86452 979 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 TFF2Q03403 129 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 STIM1Q13586 685 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 BAATQ14032 418 aaPredicted RBP5.21□□□□□ -1.58
SCFD1-209ENST00000553280 PCGF3Q3KNV8 242 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 USP41Q3LFD5 358 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 FCRLBQ6BAA4 426 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 LRRC8EQ6NSJ5 796 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 DPY19L2P1Q6NXN4 242 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 OLFML1Q6UWY5 402 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 CFAP77Q6ZQR2 320 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 CLEC17AQ6ZS10 378 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 DENND5BQ6ZUT9 1274 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 FAM57BQ71RH2 274 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 KDELC2Q7Z4H8 507 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 RNF168Q8IYW5 571 aaPredicted RBP5.21□□□□□ -1.58
SCFD1-209ENST00000553280 SLC25A41Q8N5S1 370 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 DPP10Q8N608 796 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 GJC3Q8NFK1 279 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 ELMOD3Q96FG2 381 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 SLITRK1Q96PX8 696 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 ABHD1Q96SE0 405 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 SEPT5Q99719 369 aaPredicted RBP5.21□□□□□ -1.58
SCFD1-209ENST00000553280 MXRA8Q9BRK3 442 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 C1QTNF5Q9BXJ0 243 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 KLHL4Q9C0H6 718 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 TKTL2Q9H0I9 626 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 CDT1Q9H211 546 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 MAGEE1Q9HCI5 957 aa5.21□□□□□ -1.58
SCFD1-209ENST00000553280 BPIFA1Q9NP55 256 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms