RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 BRSK1Q8TDC3 778 aa7.41□□□□□ -1.22
BEST3-212ENST00000553096 ZNF296Q8WUU4 475 aaPredicted RBP7.41□□□□□ -1.22
BEST3-212ENST00000553096 CENPIQ92674 756 aaPredicted RBP7.41□□□□□ -1.22
BEST3-212ENST00000553096 PBXIP1Q96AQ6 731 aa7.41□□□□□ -1.22
BEST3-212ENST00000553096 CSPG4P5Q96PW8 444 aa7.41□□□□□ -1.22
BEST3-212ENST00000553096 FERD3LQ96RJ6 166 aa7.41□□□□□ -1.22
BEST3-212ENST00000553096 APBA2Q99767 749 aa7.41□□□□□ -1.22
BEST3-212ENST00000553096 UQCC2Q9BRT2 126 aa7.41□□□□□ -1.22
BEST3-212ENST00000553096 TMPRSS4Q9NRS4 437 aa7.41□□□□□ -1.22
BEST3-212ENST00000553096 SYBUQ9NX95 663 aa7.41□□□□□ -1.22
BEST3-212ENST00000553096 DTLQ9NZJ0 730 aa7.41□□□□□ -1.22
BEST3-212ENST00000553096 VWA8A3KMH1 1905 aa7.4□□□□□ -1.22
BEST3-212ENST00000553096 LOC105371267A0A1B0GV96 52 aa7.4□□□□□ -1.22
BEST3-212ENST00000553096 AP3B1O00203 1094 aa7.4□□□□□ -1.22
BEST3-212ENST00000553096 CLDN5O00501 218 aa7.4□□□□□ -1.22
BEST3-212ENST00000553096 ARHGAP33O14559 1287 aa7.4□□□□□ -1.22
BEST3-212ENST00000553096 CA12O43570 354 aa7.4□□□□□ -1.22
BEST3-212ENST00000553096 COL6A2P12110 1019 aa7.4□□□□□ -1.22
BEST3-212ENST00000553096 HMOX2P30519 316 aa7.4□□□□□ -1.22
BEST3-212ENST00000553096 PKNOX1P55347 436 aa7.4□□□□□ -1.22
BEST3-212ENST00000553096 LILRA4P59901 499 aa7.4□□□□□ -1.22
BEST3-212ENST00000553096 MS4A2Q01362 244 aa7.4□□□□□ -1.22
BEST3-212ENST00000553096 RHDQ02161 417 aa7.4□□□□□ -1.22
BEST3-212ENST00000553096 BST2Q10589 180 aaKnown RBP7.4□□□□□ -1.22
BEST3-212ENST00000553096 TRIM32Q13049 653 aa7.4□□□□□ -1.22
BEST3-212ENST00000553096 IKBKEQ14164 716 aa7.4□□□□□ -1.22
BEST3-212ENST00000553096 TRIM25Q14258 630 aaKnown RBP7.4□□□□□ -1.22
BEST3-212ENST00000553096 PDK1Q15118 436 aa7.4□□□□□ -1.22
BEST3-212ENST00000553096 GDF6Q6KF10 455 aaPredicted RBP7.4□□□□□ -1.22
BEST3-212ENST00000553096 NAPRTQ6XQN6 538 aa7.4□□□□□ -1.22
BEST3-212ENST00000553096 GPR141Q7Z602 305 aa7.4□□□□□ -1.22
BEST3-212ENST00000553096 ANKRD52Q8NB46 1076 aa7.4□□□□□ -1.22
BEST3-212ENST00000553096 PGBD4Q96DM1 585 aa7.4□□□□□ -1.22
BEST3-212ENST00000553096 FAR2Q96K12 515 aa7.4□□□□□ -1.22
BEST3-212ENST00000553096 PSKH2Q96QS6 385 aa7.4□□□□□ -1.22
BEST3-212ENST00000553096 KCTD15Q96SI1 283 aaPredicted RBP7.4□□□□□ -1.22
BEST3-212ENST00000553096 UHRF1Q96T88 793 aaPredicted RBP7.4□□□□□ -1.22
BEST3-212ENST00000553096 ANKRD60Q9BZ19 345 aa7.4□□□□□ -1.22
BEST3-212ENST00000553096 TPK1Q9H3S4 243 aa7.4□□□□□ -1.22
BEST3-212ENST00000553096 PFDN4Q9NQP4 134 aa7.4□□□□□ -1.22
BEST3-212ENST00000553096 C8orf4Q9NR00 106 aa7.4□□□□□ -1.22
BEST3-212ENST00000553096 TBC1D23Q9NUY8 699 aa7.4□□□□□ -1.22
BEST3-212ENST00000553096 TMEM30AQ9NV96 361 aa7.4□□□□□ -1.22
BEST3-212ENST00000553096 MIOSQ9NXC5 875 aa7.4□□□□□ -1.22
BEST3-212ENST00000553096 BFARQ9NZS9 450 aa7.4□□□□□ -1.22
BEST3-212ENST00000553096 SLC17A6Q9P2U8 582 aa7.4□□□□□ -1.22
BEST3-212ENST00000553096 TLK1Q9UKI8 766 aa7.4□□□□□ -1.22
BEST3-212ENST00000553096 USP3Q9Y6I4 520 aa7.4□□□□□ -1.22
BEST3-212ENST00000553096 FNDC1Q4ZHG4 1894 aaPredicted RBP7.4□□□□□ -1.22
BEST3-212ENST00000553096 NYNRINQ9P2P1 1898 aaKnown RBP7.4□□□□□ -1.22
BEST3-212ENST00000553096 NUP205Q92621 2012 aa7.4□□□□□ -1.22
BEST3-212ENST00000553096 LRRC72A6NJI9 287 aa7.4□□□□□ -1.23
BEST3-212ENST00000553096 ERI2A8K979 691 aaKnown RBP7.4□□□□□ -1.23
BEST3-212ENST00000553096 RNF103O00237 685 aa7.4□□□□□ -1.23
BEST3-212ENST00000553096 NEMP1O14524 444 aa7.4□□□□□ -1.23
BEST3-212ENST00000553096 SNX2O60749 519 aa7.4□□□□□ -1.23
BEST3-212ENST00000553096 RNASEH2AO75792 299 aaKnown RBP7.4□□□□□ -1.23
BEST3-212ENST00000553096 AMHP03971 560 aa7.4□□□□□ -1.23
BEST3-212ENST00000553096 ERVK-10P10266 1014 aa7.4□□□□□ -1.23
BEST3-212ENST00000553096 MPSTP25325 297 aa7.4□□□□□ -1.23
BEST3-212ENST00000553096 SLC7A1P30825 629 aa7.4□□□□□ -1.23
BEST3-212ENST00000553096 GNL1P36915 607 aaPredicted RBP7.4□□□□□ -1.23
BEST3-212ENST00000553096 CDC42EP1Q00587 391 aa7.4□□□□□ -1.23
BEST3-212ENST00000553096 ANO4Q32M45 955 aa7.4□□□□□ -1.23
BEST3-212ENST00000553096 PPM1LQ5SGD2 360 aa7.4□□□□□ -1.23
BEST3-212ENST00000553096 NXNQ6DKJ4 435 aa7.4□□□□□ -1.23
BEST3-212ENST00000553096 FSTL4Q6MZW2 842 aa7.4□□□□□ -1.23
BEST3-212ENST00000553096 SLC26A9Q7LBE3 791 aa7.4□□□□□ -1.23
BEST3-212ENST00000553096 DGLUCYQ7Z3D6 616 aa7.4□□□□□ -1.23
BEST3-212ENST00000553096 CMC1Q7Z7K0 106 aa7.4□□□□□ -1.23
BEST3-212ENST00000553096 REM2Q8IYK8 340 aaPredicted RBP7.4□□□□□ -1.23
BEST3-212ENST00000553096 TNS4Q8IZW8 715 aa7.4□□□□□ -1.23
BEST3-212ENST00000553096 PYROXD2Q8N2H3 581 aa7.4□□□□□ -1.23
BEST3-212ENST00000553096 ARL6IP6Q8N6S5 226 aa7.4□□□□□ -1.23
BEST3-212ENST00000553096 SPERTQ8NA61 448 aa7.4□□□□□ -1.23
BEST3-212ENST00000553096 C3orf58Q8NDZ4 430 aa7.4□□□□□ -1.23
BEST3-212ENST00000553096 USP13Q92995 863 aaPredicted RBP7.4□□□□□ -1.23
BEST3-212ENST00000553096 KLHL32Q96NJ5 620 aa7.4□□□□□ -1.23
BEST3-212ENST00000553096 HNRNPABQ99729 332 aaKnown RBP7.4□□□□□ -1.23
BEST3-212ENST00000553096 TMEM79Q9BSE2 394 aa7.4□□□□□ -1.23
BEST3-212ENST00000553096 ACE2Q9BYF1 805 aaPredicted RBP7.4□□□□□ -1.23
BEST3-212ENST00000553096 NDEL1Q9GZM8 345 aa7.4□□□□□ -1.23
BEST3-212ENST00000553096 UNC93B1Q9H1C4 597 aa7.4□□□□□ -1.23
BEST3-212ENST00000553096 TRPV6Q9H1D0 765 aa7.4□□□□□ -1.23
BEST3-212ENST00000553096 WDR55Q9H6Y2 383 aaPredicted RBP7.4□□□□□ -1.23
BEST3-212ENST00000553096 RNF11Q9Y3C5 154 aa7.4□□□□□ -1.23
BEST3-212ENST00000553096 Q9Y3F1 56 aa7.4□□□□□ -1.23
BEST3-212ENST00000553096 TTC3P53804 2025 aa7.4□□□□□ -1.23
BEST3-212ENST00000553096 HEATR9A2RTY3 570 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 GRID2O43424 1007 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 DDHD2O94830 711 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 PIGNO95427 931 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 CHRNA1P02708 482 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 ALDH2P05091 517 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 C2P06681 752 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 CYBAP13498 195 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 TFEBP19484 476 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 DNAJB2P25686 324 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 ETV3P41162 512 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 GRIA4P48058 902 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms