RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 TMPRSS6Q8IU80 811 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 TDRD5Q8NAT2 981 aaKnown RBP14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 TSPAN17Q96FV3 270 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 TBATAQ96M53 351 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 DDX50Q9BQ39 737 aaKnown RBP14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 COG4Q9H9E3 785 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 IGSF5Q9NSI5 407 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 MARCH4Q9P2E8 410 aaPredicted RBP14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 RIMKLBQ9ULI2 386 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 BPTFQ12830 3046 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 OR51F1A6NGY5 319 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 SPECC1L-ADORA2AF8WAN1 911 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 DIAPH2O60879 1101 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 URODP06132 367 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 CHRNGP07510 517 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 LAG3P18627 525 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 ELF1P32519 619 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 RGRP47804 291 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 DEFB103AP81534 67 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 ASPHQ12797 758 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 CYTH1Q15438 398 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 FAM83EQ2M2I3 478 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 CFAP157Q5JU67 520 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 HECTD2Q5U5R9 776 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 C16orf59Q7L2K0 433 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 TMEM150AQ86TG1 271 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 HERC6Q8IVU3 1022 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 TCEAL8Q8IYN2 117 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 GPR150Q8NGU9 434 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 TTC8Q8TAM2 541 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 DIS3LQ8TF46 1054 aaKnown RBP14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 MOCOSQ96EN8 888 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 DNAJC1Q96KC8 554 aaKnown RBP14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 NSMCE3Q96MG7 304 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 DENND2DQ9H6A0 471 aaPredicted RBP14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 STOML2Q9UJZ1 356 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 VWA7Q9Y334 891 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 L3MBTL1Q9Y468 752 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 ARL5AQ9Y689 179 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 INSIG1O15503 277 aa14.08□□□□□ -0.16
RAB3IP-216ENST00000552199 RPP40O75818 363 aaKnown RBP14.08□□□□□ -0.16
RAB3IP-216ENST00000552199 GOT2P00505 430 aaKnown RBP14.08□□□□□ -0.16
RAB3IP-216ENST00000552199 CLTBP09497 229 aa14.08□□□□□ -0.16
RAB3IP-216ENST00000552199 CR2P20023 1033 aa14.08□□□□□ -0.16
RAB3IP-216ENST00000552199 MPSTP25325 297 aa14.08□□□□□ -0.16
RAB3IP-216ENST00000552199 SCNN1BP51168 640 aa14.08□□□□□ -0.16
RAB3IP-216ENST00000552199 HK2P52789 917 aa14.08□□□□□ -0.16
RAB3IP-216ENST00000552199 EPHB3P54753 998 aa14.08□□□□□ -0.16
RAB3IP-216ENST00000552199 KDSRQ06136 332 aa14.08□□□□□ -0.16
RAB3IP-216ENST00000552199 ILF2Q12905 390 aaKnown RBP14.08□□□□□ -0.16
RAB3IP-216ENST00000552199 CSHL1Q14406 222 aa14.08□□□□□ -0.16
RAB3IP-216ENST00000552199 E2F5Q15329 346 aa14.08□□□□□ -0.16
RAB3IP-216ENST00000552199 ARL13AQ5H913 290 aaPredicted RBP14.08□□□□□ -0.16
RAB3IP-216ENST00000552199 RNF219Q5W0B1 726 aaPredicted RBP14.08□□□□□ -0.16
RAB3IP-216ENST00000552199 CXorf57Q6NSI4 855 aaKnown RBP14.08□□□□□ -0.16
RAB3IP-216ENST00000552199 TMC7Q7Z402 723 aa14.08□□□□□ -0.16
RAB3IP-216ENST00000552199 LDB1Q86U70 411 aaPredicted RBP14.08□□□□□ -0.16
RAB3IP-216ENST00000552199 CMTR2Q8IYT2 770 aaKnown RBP14.08□□□□□ -0.16
RAB3IP-216ENST00000552199 PNPLA1Q8N8W4 532 aa14.08□□□□□ -0.16
RAB3IP-216ENST00000552199 AUTS2Q8WXX7 1259 aa14.08□□□□□ -0.16
RAB3IP-216ENST00000552199 MCUR1Q96AQ8 359 aa14.08□□□□□ -0.16
RAB3IP-216ENST00000552199 NUDCD1Q96RS6 583 aa14.08□□□□□ -0.16
RAB3IP-216ENST00000552199 MMADHCQ9H3L0 296 aaPredicted RBP14.08□□□□□ -0.16
RAB3IP-216ENST00000552199 SUDS3Q9H7L9 328 aaPredicted RBP14.08□□□□□ -0.16
RAB3IP-216ENST00000552199 ACSS2Q9NR19 701 aa14.08□□□□□ -0.16
RAB3IP-216ENST00000552199 PLXNA4Q9HCM2 1894 aa14.08□□□□□ -0.16
RAB3IP-216ENST00000552199 CCDC162PA2VCL2 907 aa14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 MATN2O00339 956 aa14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 BUD23O43709 281 aaKnown RBP14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 PIGNO95427 931 aa14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 LATS1O95835 1130 aa14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 GLP2RO95838 553 aa14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 F11P03951 625 aa14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 LTA4HP09960 611 aaKnown RBP14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 PIRTP0C851 137 aa14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 MBL2P11226 248 aaPredicted RBP14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 GM2AP17900 193 aa14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 CES1P23141 567 aa14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 RPL14P50914 215 aaKnown RBP14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 DNAJB13P59910 316 aa14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 PRKAA1Q13131 559 aa14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 PTPRCAPQ14761 206 aa14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 TECRLQ5HYJ1 363 aa14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 SWT1Q5T5J6 900 aaKnown RBP14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 AGAP9Q5VTM2 703 aa14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 LSMEM2Q8N112 164 aa14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 RBM15BQ8NDT2 890 aaKnown RBP14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 OR13C4Q8NGS5 318 aa14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 MAPK15Q8TD08 544 aa14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 PDCD6IPQ8WUM4 868 aaKnown RBP14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 SCG3Q8WXD2 468 aaKnown RBP14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 ZFRQ96KR1 1074 aaKnown RBP14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 UNKQ9C0B0 810 aaKnown RBP14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 SCUBE2Q9NQ36 999 aa14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 SMPD4Q9NXE4 827 aa14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 ARIH1Q9Y4X5 557 aaPredicted RBP14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 INSL5Q9Y5Q6 135 aa14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 CBX4O00257 560 aa14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 CD3EAPO15446 510 aaKnown RBP14.07□□□□□ -0.16
RAB3IP-216ENST00000552199 PEX11AO75192 247 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms