RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 RBM15Q96T37 977 aaKnown RBP eCLIP21.84■■□□□ 1.09
SMARCD1-212ENST00000551966 NDST4Q9H3R1 872 aa21.84■■□□□ 1.09
SMARCD1-212ENST00000551966 FOXJ2Q9P0K8 574 aa21.84■■□□□ 1.09
SMARCD1-212ENST00000551966 KIAA1468Q9P260 1216 aa21.84■■□□□ 1.09
SMARCD1-212ENST00000551966 PCDHGA4Q9Y5G9 962 aa21.84■■□□□ 1.09
SMARCD1-212ENST00000551966 BOD1L1Q8NFC6 3051 aa21.83■■□□□ 1.09
SMARCD1-212ENST00000551966 ZSCAN5CA6NGD5 496 aaPredicted RBP21.83■■□□□ 1.09
SMARCD1-212ENST00000551966 PIGNO95427 931 aa21.83■■□□□ 1.09
SMARCD1-212ENST00000551966 IGSF6O95976 241 aa21.83■■□□□ 1.09
SMARCD1-212ENST00000551966 TNFP01375 233 aa21.83■■□□□ 1.09
SMARCD1-212ENST00000551966 RHOAP61586 193 aa21.83■■□□□ 1.09
SMARCD1-212ENST00000551966 AGERQ15109 404 aa21.83■■□□□ 1.09
SMARCD1-212ENST00000551966 CYTH1Q15438 398 aa21.83■■□□□ 1.09
SMARCD1-212ENST00000551966 VWA3BQ502W6 1294 aa21.83■■□□□ 1.09
SMARCD1-212ENST00000551966 COLEC12Q5KU26 742 aa21.83■■□□□ 1.09
SMARCD1-212ENST00000551966 PYROXD2Q8N2H3 581 aa21.83■■□□□ 1.09
SMARCD1-212ENST00000551966 PLA2G15Q8NCC3 412 aa21.83■■□□□ 1.09
SMARCD1-212ENST00000551966 CENPIQ92674 756 aaPredicted RBP21.83■■□□□ 1.09
SMARCD1-212ENST00000551966 USP7Q93009 1102 aa21.83■■□□□ 1.09
SMARCD1-212ENST00000551966 FUBP1Q96AE4 644 aaKnown RBP21.83■■□□□ 1.09
SMARCD1-212ENST00000551966 LHX3Q9UBR4 397 aa21.83■■□□□ 1.09
SMARCD1-212ENST00000551966 KLQ9UEF7 1012 aa21.83■■□□□ 1.09
SMARCD1-212ENST00000551966 UNC13CQ8NB66 2214 aa21.82■■□□□ 1.08
SMARCD1-212ENST00000551966 C2CD4BA6NLJ0 364 aa21.82■■□□□ 1.08
SMARCD1-212ENST00000551966 C9orf172C9J069 976 aa21.82■■□□□ 1.08
SMARCD1-212ENST00000551966 GLB1P16278 677 aa21.82■■□□□ 1.08
SMARCD1-212ENST00000551966 HTR1BP28222 390 aa21.82■■□□□ 1.08
SMARCD1-212ENST00000551966 HDAC4P56524 1084 aa21.82■■□□□ 1.08
SMARCD1-212ENST00000551966 ELP6Q0PNE2 266 aa21.82■■□□□ 1.08
SMARCD1-212ENST00000551966 UGP2Q16851 508 aa21.82■■□□□ 1.08
SMARCD1-212ENST00000551966 MANEAQ5SRI9 462 aa21.82■■□□□ 1.08
SMARCD1-212ENST00000551966 HCAR2Q8TDS4 363 aa21.82■■□□□ 1.08
SMARCD1-212ENST00000551966 HTR3CQ8WXA8 447 aa21.82■■□□□ 1.08
SMARCD1-212ENST00000551966 CASKIN2Q8WXE0 1202 aa21.82■■□□□ 1.08
SMARCD1-212ENST00000551966 OR1E3Q8WZA6 343 aa21.82■■□□□ 1.08
SMARCD1-212ENST00000551966 HMCESQ96FZ2 354 aa21.82■■□□□ 1.08
SMARCD1-212ENST00000551966 PDXPQ96GD0 296 aa21.82■■□□□ 1.08
SMARCD1-212ENST00000551966 WDR92Q96MX6 357 aa21.82■■□□□ 1.08
SMARCD1-212ENST00000551966 PCDH12Q9NPG4 1184 aa21.82■■□□□ 1.08
SMARCD1-212ENST00000551966 SEPT10Q9P0V9 454 aa21.82■■□□□ 1.08
SMARCD1-212ENST00000551966 DGKBQ9Y6T7 804 aa21.82■■□□□ 1.08
SMARCD1-212ENST00000551966 RNF215Q9Y6U7 377 aa21.82■■□□□ 1.08
SMARCD1-212ENST00000551966 AHCTF1Q8WYP5 2266 aa21.82■■□□□ 1.08
SMARCD1-212ENST00000551966 TMEM202A6NGA9 273 aa21.81■■□□□ 1.08
SMARCD1-212ENST00000551966 BUB1BO60566 1050 aaPredicted RBP21.81■■□□□ 1.08
SMARCD1-212ENST00000551966 PNLIPP16233 465 aa21.81■■□□□ 1.08
SMARCD1-212ENST00000551966 SDC4P31431 198 aa21.81■■□□□ 1.08
SMARCD1-212ENST00000551966 LIG3P49916 1009 aa21.81■■□□□ 1.08
SMARCD1-212ENST00000551966 SUOXP51687 545 aa21.81■■□□□ 1.08
SMARCD1-212ENST00000551966 CLCA4Q14CN2 919 aa21.81■■□□□ 1.08
SMARCD1-212ENST00000551966 CAMK4Q16566 473 aa21.81■■□□□ 1.08
SMARCD1-212ENST00000551966 CERCAMQ5T4B2 595 aa21.81■■□□□ 1.08
SMARCD1-212ENST00000551966 STRADAQ7RTN6 431 aa21.81■■□□□ 1.08
SMARCD1-212ENST00000551966 SPRED1Q7Z699 444 aa21.81■■□□□ 1.08
SMARCD1-212ENST00000551966 ZSWIM9Q86XI8 627 aa21.81■■□□□ 1.08
SMARCD1-212ENST00000551966 ZNF354CQ86Y25 554 aa21.81■■□□□ 1.08
SMARCD1-212ENST00000551966 SLITRK4Q8IW52 837 aa21.81■■□□□ 1.08
SMARCD1-212ENST00000551966 MSANTD4Q8NCY6 345 aa21.81■■□□□ 1.08
SMARCD1-212ENST00000551966 EPS8L1Q8TE68 723 aa21.81■■□□□ 1.08
SMARCD1-212ENST00000551966 SLC20A1Q8WUM9 679 aa21.81■■□□□ 1.08
SMARCD1-212ENST00000551966 EXOC2Q96KP1 924 aa21.81■■□□□ 1.08
SMARCD1-212ENST00000551966 SEMA6CQ9H3T2 930 aa21.81■■□□□ 1.08
SMARCD1-212ENST00000551966 SUV39H2Q9H5I1 410 aa21.81■■□□□ 1.08
SMARCD1-212ENST00000551966 MRPL40Q9NQ50 206 aaKnown RBP21.81■■□□□ 1.08
SMARCD1-212ENST00000551966 LRIT1Q9P2V4 623 aa21.81■■□□□ 1.08
SMARCD1-212ENST00000551966 DAAM1Q9Y4D1 1078 aa21.81■■□□□ 1.08
SMARCD1-212ENST00000551966 BSNQ9UPA5 3926 aa21.81■■□□□ 1.08
SMARCD1-212ENST00000551966 TSPAN11A1L157 253 aa21.8■■□□□ 1.08
SMARCD1-212ENST00000551966 CYP1A1P04798 512 aaPredicted RBP21.8■■□□□ 1.08
SMARCD1-212ENST00000551966 PRKCGP05129 697 aa21.8■■□□□ 1.08
SMARCD1-212ENST00000551966 PCCBP05166 539 aa21.8■■□□□ 1.08
SMARCD1-212ENST00000551966 UCHL3P15374 230 aa21.8■■□□□ 1.08
SMARCD1-212ENST00000551966 CHRNB2P17787 502 aa21.8■■□□□ 1.08
SMARCD1-212ENST00000551966 MMP8P22894 467 aa21.8■■□□□ 1.08
SMARCD1-212ENST00000551966 XPAP23025 273 aaPredicted RBP21.8■■□□□ 1.08
SMARCD1-212ENST00000551966 PTPN9P43378 593 aa21.8■■□□□ 1.08
SMARCD1-212ENST00000551966 MAPK10P53779 464 aa21.8■■□□□ 1.08
SMARCD1-212ENST00000551966 TAF8Q7Z7C8 310 aa21.8■■□□□ 1.08
SMARCD1-212ENST00000551966 FAM46DQ8NEK8 389 aa21.8■■□□□ 1.08
SMARCD1-212ENST00000551966 CCL4L1Q8NHW4 92 aa21.8■■□□□ 1.08
SMARCD1-212ENST00000551966 TMEM159Q96B96 161 aa21.8■■□□□ 1.08
SMARCD1-212ENST00000551966 TUBGCP2Q9BSJ2 902 aa21.8■■□□□ 1.08
SMARCD1-212ENST00000551966 NOCTQ9UK39 431 aaKnown RBP21.8■■□□□ 1.08
SMARCD1-212ENST00000551966 A0A1W2PQC6 194 aa21.79■■□□□ 1.08
SMARCD1-212ENST00000551966 RASA4BC9J798 803 aa21.79■■□□□ 1.08
SMARCD1-212ENST00000551966 RASA4O43374 803 aa21.79■■□□□ 1.08
SMARCD1-212ENST00000551966 B4GAT1O43505 415 aa21.79■■□□□ 1.08
SMARCD1-212ENST00000551966 SFTPCP11686 197 aa21.79■■□□□ 1.08
SMARCD1-212ENST00000551966 B4GALNT1Q00973 533 aa21.79■■□□□ 1.08
SMARCD1-212ENST00000551966 MTM1Q13496 603 aa21.79■■□□□ 1.08
SMARCD1-212ENST00000551966 SERINC3Q13530 473 aa21.79■■□□□ 1.08
SMARCD1-212ENST00000551966 HLTFQ14527 1009 aaKnown RBP eCLIP21.79■■□□□ 1.08
SMARCD1-212ENST00000551966 RTL3Q8N8U3 475 aaKnown RBP21.79■■□□□ 1.08
SMARCD1-212ENST00000551966 SLC30A5Q8TAD4 765 aa21.79■■□□□ 1.08
SMARCD1-212ENST00000551966 FAM172AQ8WUF8 416 aa21.79■■□□□ 1.08
SMARCD1-212ENST00000551966 NTAN1Q96AB6 310 aa21.79■■□□□ 1.08
SMARCD1-212ENST00000551966 CMKLR1Q99788 373 aa21.79■■□□□ 1.08
SMARCD1-212ENST00000551966 FUCA2Q9BTY2 467 aa21.79■■□□□ 1.08
SMARCD1-212ENST00000551966 STK33Q9BYT3 514 aa21.79■■□□□ 1.08
SMARCD1-212ENST00000551966 TMEM168Q9H0V1 697 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms