RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 EPHA3P29320 983 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 HSPA4P34932 840 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 MAPK9P45984 424 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 AARSP49588 968 aaKnown RBP eCLIP2.55□□□□□ -2
CPSF6-207ENST00000551516 SELENOPP49908 381 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 GNAQP50148 359 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 PDE6CP51160 858 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 PGDP52209 483 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 LIMK1P53667 647 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 ALDH18A1P54886 795 aaKnown RBP2.55□□□□□ -2
CPSF6-207ENST00000551516 MC2RQ01718 297 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 MBTD1Q05BQ5 628 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 FCHO2Q0JRZ9 810 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 TRAF1Q13077 416 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 GPS1Q13098 491 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 MTAPQ13126 283 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 RESTQ13127 1097 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 MAPK7Q13164 816 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 PPP2R5CQ13362 524 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 GIT2Q14161 759 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 KCNAB1Q14722 419 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 ZBTB6Q15916 424 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 FAM187BQ17R55 369 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 TIGD6Q17RP2 521 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 PTCHD3Q3KNS1 767 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 RBM20Q5T481 1227 aaKnown RBP2.55□□□□□ -2
CPSF6-207ENST00000551516 N4BP2L1Q5TBK1 243 aaPredicted RBP2.55□□□□□ -2
CPSF6-207ENST00000551516 MANEALQ5VSG8 457 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 B3GNTL1Q67FW5 361 aaPredicted RBP2.55□□□□□ -2
CPSF6-207ENST00000551516 TANGO2Q6ICL3 276 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 SLC8B1Q6J4K2 584 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 CCDC70Q6NSX1 233 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 MOXD1Q6UVY6 613 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 DGLUCYQ7Z3D6 616 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 TMPRSS9Q7Z410 1059 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 TMEM150AQ86TG1 271 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 PLA2G4DQ86XP0 818 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 TMC8Q8IU68 726 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 RASGRP3Q8IV61 690 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 NAV2Q8IVL1 2488 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 C4orf19Q8IY42 314 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 NRSN1Q8IZ57 195 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 ADGRG5Q8IZF4 528 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 DAW1Q8N136 415 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 TMTC2Q8N394 836 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 C4orf32Q8N8J7 132 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 TDRD5Q8NAT2 981 aaKnown RBP2.55□□□□□ -2
CPSF6-207ENST00000551516 CPEB3Q8NE35 698 aaKnown RBP2.55□□□□□ -2
CPSF6-207ENST00000551516 RDM1Q8NG50 284 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 CXorf38Q8TB03 319 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 DNAJB14Q8TBM8 379 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 PRPF31Q8WWY3 499 aaKnown RBP2.55□□□□□ -2
CPSF6-207ENST00000551516 ATRIPQ8WXE1 791 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 PIBF1Q8WXW3 757 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 RILPL2Q969X0 211 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 FAM136AQ96C01 138 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 EID2BQ96D98 161 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 P2RY11Q96G91 374 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 ZNF462Q96JM2 2506 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 ZMAT2Q96NC0 199 aaKnown RBP2.55□□□□□ -2
CPSF6-207ENST00000551516 PPP1R10Q96QC0 940 aaKnown RBP2.55□□□□□ -2
CPSF6-207ENST00000551516 HIST1H2AAQ96QV6 131 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 CDK5RAP1Q96SZ6 601 aaKnown RBP2.55□□□□□ -2
CPSF6-207ENST00000551516 GAD1Q99259 594 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 KRTAP4-12Q9BQ66 201 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 UBAC1Q9BSL1 405 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 TPSD1Q9BZJ3 242 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 INO80BQ9C086 356 aaPredicted RBP2.55□□□□□ -2
CPSF6-207ENST00000551516 PLEKHA4Q9H4M7 779 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 CXorf36Q9H7Y0 433 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 FBRSL1Q9HCM7 1045 aaKnown RBP2.55□□□□□ -2
CPSF6-207ENST00000551516 AKIP1Q9NQ31 210 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 ARHGEF3Q9NR81 526 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 TBC1D22BQ9NU19 505 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 TMEM74BQ9NUR3 256 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 INTS13Q9NVM9 706 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 PARPBPQ9NWS1 579 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 HCFC1R1Q9NWW0 138 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 VSX1Q9NZR4 365 aaPredicted RBP2.55□□□□□ -2
CPSF6-207ENST00000551516 KIF17Q9P2E2 1029 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 GRHPRQ9UBQ7 328 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 DNAJB11Q9UBS4 358 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 ST6GALNAC2Q9UJ37 374 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 SERTAD3Q9UJW9 196 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 CDH7Q9ULB5 785 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 USP22Q9UPT9 525 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 CHST2Q9Y4C5 530 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 DTNAQ9Y4J8 743 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 SPTA1P02549 2419 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 SDK1Q7Z5N4 2213 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 MYH7BA7E2Y1 1941 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 DOCK5Q9H7D0 1870 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 DENND3A2RUS2 1198 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 OR2W5A6NFC9 320 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 K7ESM1 405 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 M0R3H8 397 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 PSMD9O00233 223 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 ASNA1O43681 348 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 LRP3O75074 770 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 ZC3H11AO75152 810 aaKnown RBP eCLIP2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms