RNA–Protein interactions for RNA: ENST00000551477.5

LETMD1-230, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 1,186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-230ENST00000551477 CCDC112Q8NEF3 446 aa17.12■□□□□ 0.33
LETMD1-230ENST00000551477 DEFB124Q8NES8 71 aa17.12■□□□□ 0.33
LETMD1-230ENST00000551477 SETD7Q8WTS6 366 aaKnown RBP17.12■□□□□ 0.33
LETMD1-230ENST00000551477 PDCD6IPQ8WUM4 868 aaKnown RBP17.12■□□□□ 0.33
LETMD1-230ENST00000551477 WRAP53Q9BUR4 548 aaKnown RBP17.12■□□□□ 0.33
LETMD1-230ENST00000551477 CA5BQ9Y2D0 317 aa17.12■□□□□ 0.33
LETMD1-230ENST00000551477 TTLL3Q9Y4R7 772 aa17.12■□□□□ 0.33
LETMD1-230ENST00000551477 PCDHGC4Q9Y5F7 938 aa17.12■□□□□ 0.33
LETMD1-230ENST00000551477 LRRK1Q38SD2 2015 aa17.11■□□□□ 0.33
LETMD1-230ENST00000551477 A0A1B0GTQ1 180 aa17.11■□□□□ 0.33
LETMD1-230ENST00000551477 TTC24A2A3L6 582 aaPredicted RBP17.11■□□□□ 0.33
LETMD1-230ENST00000551477 CCDC66A2RUB6 948 aa17.11■□□□□ 0.33
LETMD1-230ENST00000551477 TRAFD1O14545 582 aaPredicted RBP17.11■□□□□ 0.33
LETMD1-230ENST00000551477 FLRT2O43155 660 aa17.11■□□□□ 0.33
LETMD1-230ENST00000551477 PCDHGA12O60330 932 aa17.11■□□□□ 0.33
LETMD1-230ENST00000551477 KRT10P13645 584 aa17.11■□□□□ 0.33
LETMD1-230ENST00000551477 TGM2P21980 687 aa17.11■□□□□ 0.33
LETMD1-230ENST00000551477 CA4P22748 312 aa17.11■□□□□ 0.33
LETMD1-230ENST00000551477 CTNNA1P35221 906 aaKnown RBP17.11■□□□□ 0.33
LETMD1-230ENST00000551477 MMP12P39900 470 aa17.11■□□□□ 0.33
LETMD1-230ENST00000551477 CETN2P41208 172 aa17.11■□□□□ 0.33
LETMD1-230ENST00000551477 COPS2P61201 443 aa17.11■□□□□ 0.33
LETMD1-230ENST00000551477 AP1B1Q10567 949 aa17.11■□□□□ 0.33
LETMD1-230ENST00000551477 FGL2Q14314 439 aa17.11■□□□□ 0.33
LETMD1-230ENST00000551477 TAZQ16635 292 aa17.11■□□□□ 0.33
LETMD1-230ENST00000551477 ABI3BPQ7Z7G0 1075 aa17.11■□□□□ 0.33
LETMD1-230ENST00000551477 NDUFAF2Q8N183 169 aa17.11■□□□□ 0.33
LETMD1-230ENST00000551477 SPOCK2Q92563 424 aa17.11■□□□□ 0.33
LETMD1-230ENST00000551477 LGMNQ99538 433 aa17.11■□□□□ 0.33
LETMD1-230ENST00000551477 SEMA3CQ99985 751 aa17.11■□□□□ 0.33
LETMD1-230ENST00000551477 DESI2Q9BSY9 194 aa17.11■□□□□ 0.33
LETMD1-230ENST00000551477 PCDHA3Q9Y5H8 950 aa17.11■□□□□ 0.33
LETMD1-230ENST00000551477 CFAP69A5D8W1 941 aa17.1■□□□□ 0.33
LETMD1-230ENST00000551477 HTRA2O43464 458 aaPredicted RBP17.1■□□□□ 0.33
LETMD1-230ENST00000551477 NRDCO43847 1150 aa17.1■□□□□ 0.33
LETMD1-230ENST00000551477 SH3BP5O60239 455 aa17.1■□□□□ 0.33
LETMD1-230ENST00000551477 LZTS3O60299 673 aaPredicted RBP17.1■□□□□ 0.33
LETMD1-230ENST00000551477 CST8O60676 142 aa17.1■□□□□ 0.33
LETMD1-230ENST00000551477 CPP00450 1065 aa17.1■□□□□ 0.33
LETMD1-230ENST00000551477 ITIH2P19823 946 aa17.1■□□□□ 0.33
LETMD1-230ENST00000551477 RABIFP47224 123 aa17.1■□□□□ 0.33
LETMD1-230ENST00000551477 CLDN2P57739 230 aa17.1■□□□□ 0.33
LETMD1-230ENST00000551477 ARMC12Q5T9G4 340 aa17.1■□□□□ 0.33
LETMD1-230ENST00000551477 KAZNQ674X7 775 aa17.1■□□□□ 0.33
LETMD1-230ENST00000551477 KYAT3Q6YP21 454 aaKnown RBP17.1■□□□□ 0.33
LETMD1-230ENST00000551477 DBX2Q6ZNG2 339 aa17.1■□□□□ 0.33
LETMD1-230ENST00000551477 GCNT7Q6ZNI0 430 aa17.1■□□□□ 0.33
LETMD1-230ENST00000551477 Q6ZSR6 202 aa17.1■□□□□ 0.33
LETMD1-230ENST00000551477 PTAR1Q7Z6K3 402 aaPredicted RBP17.1■□□□□ 0.33
LETMD1-230ENST00000551477 ZSWIM9Q86XI8 627 aa17.1■□□□□ 0.33
LETMD1-230ENST00000551477 SPATS2Q86XZ4 545 aaKnown RBP17.1■□□□□ 0.33
LETMD1-230ENST00000551477 P3H4Q92791 437 aa17.1■□□□□ 0.33
LETMD1-230ENST00000551477 TSGA10Q9BZW7 698 aa17.1■□□□□ 0.33
LETMD1-230ENST00000551477 PHTF1Q9UMS5 762 aa17.1■□□□□ 0.33
LETMD1-230ENST00000551477 SPTBN2O15020 2390 aa17.09■□□□□ 0.33
LETMD1-230ENST00000551477 MACROD2A1Z1Q3 448 aa17.09■□□□□ 0.33
LETMD1-230ENST00000551477 RAD51BO15315 384 aa17.09■□□□□ 0.33
LETMD1-230ENST00000551477 ARHGAP6O43182 974 aa17.09■□□□□ 0.33
LETMD1-230ENST00000551477 JCHAINP01591 159 aa17.09■□□□□ 0.33
LETMD1-230ENST00000551477 CTNNA2P26232 953 aa17.09■□□□□ 0.33
LETMD1-230ENST00000551477 GRK6P43250 576 aa17.09■□□□□ 0.33
LETMD1-230ENST00000551477 RXRGP48443 463 aa17.09■□□□□ 0.33
LETMD1-230ENST00000551477 LIG3P49916 1009 aa17.09■□□□□ 0.33
LETMD1-230ENST00000551477 RWDD2BP57060 319 aa17.09■□□□□ 0.33
LETMD1-230ENST00000551477 IFI35P80217 286 aaPredicted RBP17.09■□□□□ 0.33
LETMD1-230ENST00000551477 PPP2R5EQ16537 467 aa17.09■□□□□ 0.33
LETMD1-230ENST00000551477 ALG1LQ6GMV1 187 aa17.09■□□□□ 0.33
LETMD1-230ENST00000551477 NPNTQ6UXI9 565 aa17.09■□□□□ 0.33
LETMD1-230ENST00000551477 OR13H1Q8NG92 308 aa17.09■□□□□ 0.33
LETMD1-230ENST00000551477 RHBDD1Q8TEB9 315 aa17.09■□□□□ 0.33
LETMD1-230ENST00000551477 KRT35Q92764 455 aa17.09■□□□□ 0.33
LETMD1-230ENST00000551477 CENPTQ96BT3 561 aa17.09■□□□□ 0.33
LETMD1-230ENST00000551477 BMFQ96LC9 184 aa17.09■□□□□ 0.33
LETMD1-230ENST00000551477 OLFM3Q96PB7 478 aa17.09■□□□□ 0.33
LETMD1-230ENST00000551477 KLF6Q99612 283 aaPredicted RBP17.09■□□□□ 0.33
LETMD1-230ENST00000551477 AMFRQ9UKV5 643 aa17.09■□□□□ 0.33
LETMD1-230ENST00000551477 RAI2Q9Y5P3 530 aa17.09■□□□□ 0.33
LETMD1-230ENST00000551477 hCG_1818297A0A087WSY0 165 aa17.08■□□□□ 0.32
LETMD1-230ENST00000551477 GRID2IPA4D2P6 1211 aa17.08■□□□□ 0.32
LETMD1-230ENST00000551477 POM121BA6NF01 834 aa17.08■□□□□ 0.32
LETMD1-230ENST00000551477 KCNK1O00180 336 aa17.08■□□□□ 0.32
LETMD1-230ENST00000551477 TOR1BO14657 336 aa17.08■□□□□ 0.32
LETMD1-230ENST00000551477 PGLSO95336 258 aa17.08■□□□□ 0.32
LETMD1-230ENST00000551477 HLA-DQB2P05538 268 aa17.08■□□□□ 0.32
LETMD1-230ENST00000551477 ITGAVP06756 1048 aa17.08■□□□□ 0.32
LETMD1-230ENST00000551477 ELFN1P0C7U0 828 aa17.08■□□□□ 0.32
LETMD1-230ENST00000551477 CYP2A6P11509 494 aaPredicted RBP17.08■□□□□ 0.32
LETMD1-230ENST00000551477 C6P13671 934 aa17.08■□□□□ 0.32
LETMD1-230ENST00000551477 MARCKSL1P49006 195 aa17.08■□□□□ 0.32
LETMD1-230ENST00000551477 IL9RQ01113 521 aa17.08■□□□□ 0.32
LETMD1-230ENST00000551477 TRAF2Q12933 501 aa17.08■□□□□ 0.32
LETMD1-230ENST00000551477 PTK2BQ14289 1009 aa17.08■□□□□ 0.32
LETMD1-230ENST00000551477 LRRC14Q15048 493 aa17.08■□□□□ 0.32
LETMD1-230ENST00000551477 TRIP6Q15654 476 aaKnown RBP17.08■□□□□ 0.32
LETMD1-230ENST00000551477 PRAMEF14Q5SWL7 426 aa17.08■□□□□ 0.32
LETMD1-230ENST00000551477 CCDC181Q5TID7 509 aa17.08■□□□□ 0.32
LETMD1-230ENST00000551477 DPPA4Q7L190 304 aa17.08■□□□□ 0.32
LETMD1-230ENST00000551477 PEX26Q7Z412 305 aa17.08■□□□□ 0.32
LETMD1-230ENST00000551477 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.08■□□□□ 0.32
LETMD1-230ENST00000551477 RNF10Q8N5U6 811 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms