RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 ILF2Q12905 390 aaKnown RBP5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 TRPC3Q13507 836 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 SLC12A1Q13621 1099 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 FLOT2Q14254 428 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 SNX17Q15036 470 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 MAPRE2Q15555 327 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 ATP6AP1Q15904 470 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 CALCRLQ16602 461 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 NKG7Q16617 165 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 CTF1Q16619 201 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 HIST2H2ACQ16777 129 aaPredicted RBP5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 DDR2Q16832 855 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 LETM2Q2VYF4 491 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 PGS1Q32NB8 556 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 CBWD6Q4V339 395 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 Q5BKY6 102 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 CBWD3Q5JTY5 395 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 METTL24Q5JXM2 366 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 CBWD5Q5RIA9 395 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 C1orf220Q5T0J3 134 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 CCNYL2Q5T2Q4 361 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 LRRC38Q5VT99 294 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 SHEQ5VZ18 495 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 FAM205BPQ63HN1 556 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 PDPK2PQ6A1A2 396 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 ZNF746Q6NUN9 644 aaPredicted RBP5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 RINT1Q6NUQ1 792 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 LETMD1Q6P1Q0 360 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 METTL2BQ6P1Q9 378 aaKnown RBP5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 C15orf52Q6ZUT6 534 aaKnown RBP5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 CYS1Q717R9 158 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 FKBP9P1Q75LS8 142 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 GALNT7Q86SF2 657 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 ADGRA1Q86SQ6 560 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 LINC00523Q86TU6 105 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 SLC22A16Q86VW1 577 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 SLC26A11Q86WA9 606 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 WDR49Q8IV35 697 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 NUDCD3Q8IVD9 361 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 IGDCC3Q8IVU1 814 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 SLITRK4Q8IW52 837 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 CCDC28AQ8IWP9 274 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 ADGRG5Q8IZF4 528 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 ADGRF2Q8IZF7 708 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 LGI2Q8N0V4 545 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 DCLK2Q8N568 766 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 FAM47BQ8NA70 645 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 KYQ8NBH2 561 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 RP9Q8TA86 221 aaKnown RBP5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 GRPEL2Q8TAA5 225 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 TBCKQ8TEA7 893 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 FNIP1Q8TF40 1166 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 ZFP90Q8TF47 636 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 JDP2Q8WYK2 163 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 SHC3Q92529 594 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 MUL1Q969V5 352 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 DCPSQ96C86 337 aaKnown RBP5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 CCDC124Q96CT7 223 aaKnown RBP5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 TMEM80Q96HE8 168 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 ST6GAL2Q96JF0 529 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 CDHR1Q96JP9 859 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 CEP19Q96LK0 163 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 GLT1D1Q96MS3 346 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 FIZ1Q96SL8 496 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 ACO2Q99798 780 aaKnown RBP5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 UQCC2Q9BRT2 126 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 RAB34Q9BZG1 259 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 ACAD9Q9H845 621 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 C12orf4Q9NQ89 552 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 TCF7L2Q9NQB0 619 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 TLR9Q9NR96 1032 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 SMOXQ9NWM0 555 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 SEPT10Q9P0V9 454 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 COPG2Q9UBF2 871 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 EIF3KQ9UBQ5 218 aaKnown RBP5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 CD300AQ9UGN4 299 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 SRRDQ9UH36 339 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 ZNRF3Q9ULT6 936 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 AFG3L2Q9Y4W6 797 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 TEX264Q9Y6I9 313 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 CSNK1G3Q9Y6M4 447 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 MYH11P35749 1972 aa5.34□□□□□ -1.55
LSM3P2-201ENST00000551246 CNTNAP2Q9UHC6 1331 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 CYP3A7-CYP3A51PA0A087WV96 503 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 TCRBV9S1A1TA0A576 114 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 TCAF2A6NFQ2 919 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 TRIM49D1C9J1S8 452 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 TAF4O00268 1085 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 CTDSP2O14595 271 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 TRDMT1O14717 391 aaKnown RBP5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 AURKAO14965 403 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 ASNA1O43681 348 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 SNX2O60749 519 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 RNGTTO60942 597 aaKnown RBP5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 ZNF254O75437 659 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 UPK1BO75841 260 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 TOMM70O94826 608 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 GABARAPO95166 117 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 SGPL1O95470 568 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 BPNT1O95861 308 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms