RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 ZNF641Q96N77 438 aaPredicted RBP21.88■■□□□ 1.09
SMARCC2-210ENST00000550519 AGPAT1Q99943 283 aa21.88■■□□□ 1.09
SMARCC2-210ENST00000550519 APOOQ9BUR5 198 aa21.88■■□□□ 1.09
SMARCC2-210ENST00000550519 GULP1Q9UBP9 304 aa21.88■■□□□ 1.09
SMARCC2-210ENST00000550519 DOLKQ9UPQ8 538 aa21.88■■□□□ 1.09
SMARCC2-210ENST00000550519 ANKRD62A6NC57 917 aa21.87■■□□□ 1.09
SMARCC2-210ENST00000550519 LGALS16A8MUM7 142 aa21.87■■□□□ 1.09
SMARCC2-210ENST00000550519 J3KR12 359 aa21.87■■□□□ 1.09
SMARCC2-210ENST00000550519 BUB1BO60566 1050 aaPredicted RBP21.87■■□□□ 1.09
SMARCC2-210ENST00000550519 RASGRP1O95267 797 aa21.87■■□□□ 1.09
SMARCC2-210ENST00000550519 CTSEP14091 401 aa21.87■■□□□ 1.09
SMARCC2-210ENST00000550519 HTR1BP28222 390 aa21.87■■□□□ 1.09
SMARCC2-210ENST00000550519 HTR7P34969 479 aa21.87■■□□□ 1.09
SMARCC2-210ENST00000550519 NDST2P52849 883 aa21.87■■□□□ 1.09
SMARCC2-210ENST00000550519 INPP5AQ14642 412 aa21.87■■□□□ 1.09
SMARCC2-210ENST00000550519 BRAT1Q6PJG6 821 aa21.87■■□□□ 1.09
SMARCC2-210ENST00000550519 ENPP7Q6UWV6 458 aa21.87■■□□□ 1.09
SMARCC2-210ENST00000550519 KYQ8NBH2 561 aa21.87■■□□□ 1.09
SMARCC2-210ENST00000550519 TTC9Q92623 222 aa21.87■■□□□ 1.09
SMARCC2-210ENST00000550519 SEPT11Q9NVA2 429 aaKnown RBP21.87■■□□□ 1.09
SMARCC2-210ENST00000550519 DONSONQ9NYP3 566 aa21.87■■□□□ 1.09
SMARCC2-210ENST00000550519 LIMA1Q9UHB6 759 aaKnown RBP21.87■■□□□ 1.09
SMARCC2-210ENST00000550519 RABGEF1Q9UJ41 708 aa21.87■■□□□ 1.09
SMARCC2-210ENST00000550519 K7ENP7 123 aa21.86■■□□□ 1.09
SMARCC2-210ENST00000550519 PRAMEF11O60813 436 aa21.86■■□□□ 1.09
SMARCC2-210ENST00000550519 TNFSF15O95150 251 aa21.86■■□□□ 1.09
SMARCC2-210ENST00000550519 MMP12P39900 470 aa21.86■■□□□ 1.09
SMARCC2-210ENST00000550519 LIG3P49916 1009 aa21.86■■□□□ 1.09
SMARCC2-210ENST00000550519 SRP54P61011 504 aaKnown RBP21.86■■□□□ 1.09
SMARCC2-210ENST00000550519 OGDHQ02218 1023 aa21.86■■□□□ 1.09
SMARCC2-210ENST00000550519 INO80CQ6PI98 192 aaPredicted RBP21.86■■□□□ 1.09
SMARCC2-210ENST00000550519 FOXR1Q6PIV2 292 aa21.86■■□□□ 1.09
SMARCC2-210ENST00000550519 RBM43Q6ZSC3 357 aaKnown RBP21.86■■□□□ 1.09
SMARCC2-210ENST00000550519 NYAP1Q6ZVC0 841 aa21.86■■□□□ 1.09
SMARCC2-210ENST00000550519 ZSWIM9Q86XI8 627 aa21.86■■□□□ 1.09
SMARCC2-210ENST00000550519 MCOLN2Q8IZK6 566 aa21.86■■□□□ 1.09
SMARCC2-210ENST00000550519 LIN37Q96GY3 246 aaPredicted RBP21.86■■□□□ 1.09
SMARCC2-210ENST00000550519 PCMTD1Q96MG8 357 aaPredicted RBP21.86■■□□□ 1.09
SMARCC2-210ENST00000550519 TUBGCP5Q96RT8 1024 aa21.86■■□□□ 1.09
SMARCC2-210ENST00000550519 LMBRD1Q9NUN5 540 aa21.86■■□□□ 1.09
SMARCC2-210ENST00000550519 SIRPGQ9P1W8 387 aa21.86■■□□□ 1.09
SMARCC2-210ENST00000550519 OR1A2Q9Y585 309 aa21.86■■□□□ 1.09
SMARCC2-210ENST00000550519 ASH1LQ9NR48 2969 aaKnown RBP21.85■■□□□ 1.09
SMARCC2-210ENST00000550519 LRRC10BA6NIK2 292 aa21.85■■□□□ 1.09
SMARCC2-210ENST00000550519 ITGA2BP08514 1039 aa21.85■■□□□ 1.09
SMARCC2-210ENST00000550519 CSNK1DP48730 415 aa21.85■■□□□ 1.09
SMARCC2-210ENST00000550519 TPI1P60174 286 aa21.85■■□□□ 1.09
SMARCC2-210ENST00000550519 ERAP2Q6P179 960 aa21.85■■□□□ 1.09
SMARCC2-210ENST00000550519 RD3Q7Z3Z2 195 aa21.85■■□□□ 1.09
SMARCC2-210ENST00000550519 GKN2Q86XP6 184 aa21.85■■□□□ 1.09
SMARCC2-210ENST00000550519 CAMK1DQ8IU85 385 aa21.85■■□□□ 1.09
SMARCC2-210ENST00000550519 CCDC74AQ96AQ1 378 aa21.85■■□□□ 1.09
SMARCC2-210ENST00000550519 ERGIC2Q96RQ1 377 aa21.85■■□□□ 1.09
SMARCC2-210ENST00000550519 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.85■■□□□ 1.09
SMARCC2-210ENST00000550519 SYNDIG1Q9H7V2 258 aa21.85■■□□□ 1.09
SMARCC2-210ENST00000550519 GPR34Q9UPC5 381 aa21.85■■□□□ 1.09
SMARCC2-210ENST00000550519 ATP8A1Q9Y2Q0 1164 aa21.85■■□□□ 1.09
SMARCC2-210ENST00000550519 KIF26BQ2KJY2 2108 aa21.85■■□□□ 1.09
SMARCC2-210ENST00000550519 COL6A6A6NMZ7 2263 aa21.85■■□□□ 1.09
SMARCC2-210ENST00000550519 CFAP69A5D8W1 941 aa21.84■■□□□ 1.09
SMARCC2-210ENST00000550519 RGRP47804 291 aa21.84■■□□□ 1.09
SMARCC2-210ENST00000550519 UBXN1Q04323 297 aa21.84■■□□□ 1.09
SMARCC2-210ENST00000550519 CLN3Q13286 438 aa21.84■■□□□ 1.09
SMARCC2-210ENST00000550519 MTM1Q13496 603 aa21.84■■□□□ 1.09
SMARCC2-210ENST00000550519 TCEA2Q15560 299 aa21.84■■□□□ 1.09
SMARCC2-210ENST00000550519 KCTD16Q68DU8 428 aa21.84■■□□□ 1.09
SMARCC2-210ENST00000550519 ACAD10Q6JQN1 1059 aa21.84■■□□□ 1.09
SMARCC2-210ENST00000550519 DCUN1D2Q6PH85 259 aa21.84■■□□□ 1.09
SMARCC2-210ENST00000550519 CLEC17AQ6ZS10 378 aa21.84■■□□□ 1.09
SMARCC2-210ENST00000550519 B3GNT8Q7Z7M8 397 aa21.84■■□□□ 1.09
SMARCC2-210ENST00000550519 ATL2Q8NHH9 583 aa21.84■■□□□ 1.09
SMARCC2-210ENST00000550519 CELF6Q96J87 481 aaKnown RBP21.84■■□□□ 1.09
SMARCC2-210ENST00000550519 WDR92Q96MX6 357 aa21.84■■□□□ 1.09
SMARCC2-210ENST00000550519 GFM1Q96RP9 751 aaKnown RBP21.84■■□□□ 1.09
SMARCC2-210ENST00000550519 RBM15Q96T37 977 aaKnown RBP eCLIP21.84■■□□□ 1.09
SMARCC2-210ENST00000550519 SEMA4CQ9C0C4 833 aa21.84■■□□□ 1.09
SMARCC2-210ENST00000550519 SLC39A8Q9C0K1 460 aa21.84■■□□□ 1.09
SMARCC2-210ENST00000550519 KLQ9UEF7 1012 aa21.84■■□□□ 1.09
SMARCC2-210ENST00000550519 DGKBQ9Y6T7 804 aa21.84■■□□□ 1.09
SMARCC2-210ENST00000550519 A0A1W2PQM1 296 aa21.83■■□□□ 1.09
SMARCC2-210ENST00000550519 D6RAR5 112 aa21.83■■□□□ 1.09
SMARCC2-210ENST00000550519 PLD2O14939 933 aa21.83■■□□□ 1.09
SMARCC2-210ENST00000550519 PRKCGP05129 697 aa21.83■■□□□ 1.09
SMARCC2-210ENST00000550519 PAPOLAP51003 745 aaKnown RBP21.83■■□□□ 1.09
SMARCC2-210ENST00000550519 CCL7P80098 99 aa21.83■■□□□ 1.09
SMARCC2-210ENST00000550519 EIF3IQ13347 325 aaKnown RBP21.83■■□□□ 1.09
SMARCC2-210ENST00000550519 CFAP58Q5T655 872 aa21.83■■□□□ 1.09
SMARCC2-210ENST00000550519 SRLQ86TD4 932 aa21.83■■□□□ 1.09
SMARCC2-210ENST00000550519 PLA2G15Q8NCC3 412 aa21.83■■□□□ 1.09
SMARCC2-210ENST00000550519 TSEN2Q8NCE0 465 aaKnown RBP21.83■■□□□ 1.09
SMARCC2-210ENST00000550519 ANKRD20A12PQ8NF67 263 aa21.83■■□□□ 1.09
SMARCC2-210ENST00000550519 GPR156Q8NFN8 814 aa21.83■■□□□ 1.09
SMARCC2-210ENST00000550519 OR6C4Q8NGE1 309 aa21.83■■□□□ 1.09
SMARCC2-210ENST00000550519 ECHDC3Q96DC8 303 aa21.83■■□□□ 1.09
SMARCC2-210ENST00000550519 GPATCH2LQ9NWQ4 482 aa21.83■■□□□ 1.09
SMARCC2-210ENST00000550519 AP4E1Q9UPM8 1137 aa21.83■■□□□ 1.09
SMARCC2-210ENST00000550519 ARHGAP42A6NI28 874 aa21.82■■□□□ 1.08
SMARCC2-210ENST00000550519 EIF3CLB5ME19 914 aaKnown RBP21.82■■□□□ 1.08
SMARCC2-210ENST00000550519 TMX2-CTNND1H3BSU7 103 aa21.82■■□□□ 1.08
SMARCC2-210ENST00000550519 TNFP01375 233 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms